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Gene: Tpm4 (tropomyosin 4) Ictidomys tridecemlineatus

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Symbol:

Tpm4

Name:

tropomyosin 4

RGD ID:

12563049

Description:

ENCODES a protein that exhibits identical protein binding (ortholog); protein heterodimerization activity (ortholog); protein homodimerization activity (ortholog); INVOLVED IN platelet formation (inferred); ASSOCIATED WITH Acute Coronary Syndrome (ortholog); asbestosis (ortholog); Esophageal Neoplasms (ortholog); FOUND IN actin cytoskeleton (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tropomyosin alpha-4 chain

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TPM4 (tropomyosin 4)	NCBI	Ortholog
Mus musculus (house mouse):	Tpm4 (tropomyosin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Tpm4 (tropomyosin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tpm4 (tropomyosin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TPM4 (tropomyosin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TPM4 (tropomyosin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TPM4 (tropomyosin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TPM4 (tropomyosin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tpm4 (tropomyosin 4)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	204,857,159 - 204,874,401 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936596	4,406,283 - 4,418,932 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936596	4,406,301 - 4,423,775 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Acute Coronary Syndrome (ISO)

asbestosis (ISO)

Esophageal Neoplasms (ISO)

Experimental Liver Cirrhosis (ISO)

hemorrhagic disease (ISO)

hereditary breast ovarian cancer syndrome (ISO)

Neoplasm Metastasis (ISO)

osteoporosis (ISO)

Platelet-Type Bleeding Disorder 25 (ISO)

pre-malignant neoplasm (ISO)

Weight Gain (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

platelet formation (IEA)

Cellular Component

actin cytoskeleton (ISO)

cortical cytoskeleton (IEA)

cytoplasm (IEA)

podosome (IEA)

stress fiber (IEA)

Molecular Function

actin binding (IEA)

actin filament binding (IEA)

identical protein binding (ISO)

protein binding (ISO)

protein heterodimerization activity (ISO)

protein homodimerization activity (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

Tpm4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	204,857,159 - 204,874,401 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936596	4,406,283 - 4,418,932 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936596	4,406,301 - 4,423,775 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TPM4
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	16,067,538 - 16,103,002 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	16,067,021 - 16,103,005 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	16,178,348 - 16,213,812 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	16,048,325 - 16,074,408 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	19	16,048,324 - 16,074,408	NCBI
Celera	19	16,080,322 - 16,115,740 (+)	NCBI		Celera
Cytogenetic Map	19	p13.12-p13.11	NCBI
HuRef	19	15,749,181 - 15,784,766 (+)	NCBI		HuRef
CHM1_1	19	16,177,722 - 16,213,291 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	19	16,201,542 - 16,237,074 (+)	NCBI		T2T-CHM13v2.0

Tpm4
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	72,889,132 - 72,906,986 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	72,884,018 - 72,906,986 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	72,135,288 - 72,153,142 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	72,130,174 - 72,153,142 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	74,659,191 - 74,677,028 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	75,064,281 - 75,082,118 (+)	NCBI		MGSCv36	mm8
Celera	8	76,490,967 - 76,508,585 (+)	NCBI		Celera
Cytogenetic Map	8	B3.3	NCBI
cM Map	8	34.81	NCBI

Tpm4
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	17,718,442 - 17,732,483 (-)	NCBI		GRCr8
mRatBN7.2	16	17,684,415 - 17,698,456 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	17,683,195 - 17,705,984 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	17,743,321 - 17,757,333 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	18,875,963 - 18,889,968 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	17,796,254 - 17,810,266 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	19,385,810 - 19,399,851 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	19,385,736 - 19,399,903 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	19,244,141 - 19,258,182 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	18,108,914 - 18,122,956 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	18,108,911 - 18,122,954 (-)	NCBI
Celera	16	17,899,051 - 17,913,092 (-)	NCBI		Celera
Cytogenetic Map	16	p14	NCBI

Tpm4
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955524	1,415,848 - 1,432,139 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955524	1,419,061 - 1,432,114 (-)	NCBI	ChiLan1.0	ChiLan1.0

TPM4
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	20,938,579 - 20,975,280 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	19,945,282 - 19,981,066 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	15,557,683 - 15,593,143 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	16,540,805 - 16,575,675 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	16,540,805 - 16,575,312 (+)	Ensembl	panpan1.1		panPan2

TPM4
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	46,354,808 - 46,376,489 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	46,355,736 - 46,376,425 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	46,269,322 - 46,291,014 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	46,844,446 - 46,864,961 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	46,821,781 - 46,864,926 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	46,077,842 - 46,099,527 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	46,489,401 - 46,511,083 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	46,765,733 - 46,787,433 (-)	NCBI		UU_Cfam_GSD_1.0

TPM4
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	61,453,725 - 61,476,781 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	61,453,721 - 61,476,781 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	61,150,543 - 61,173,575 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3
Pig Cytomap	2	q24-q29	NCBI

TPM4
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	14,566,958 - 14,604,754 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	14,566,869 - 14,598,934 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666074	4,891,204 - 4,926,682 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tpm4
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624908	1,132,215 - 1,152,319 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624908	1,135,240 - 1,155,175 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_021731524	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021731525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000019734 ⟹ ENSSTOP00000019886

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936596	4,406,283 - 4,418,932 (-)	Ensembl

RefSeq Acc Id:

XM_021731524 ⟹ XP_021587199

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	204,857,159 - 204,874,401 (-)	NCBI
SpeTri2.0	NW_004936596	4,406,301 - 4,423,540 (-)	NCBI

Sequence:

show sequence

TGGCACCCCAGGCTGATGCGTCCCCCGATCTGTCCCCAGGTGGAGGAGGAGCTGACGCACCTCC
AGAAGAAACTGAAAGGGACAGAGGATGAGCTGGACAAATACTCGGAGGACCTGAAGGACGCGCA
GGAGAAGCTGGAGCTGACGGAGAAGAAAGCCTCCGACGCCGAAGGTGATGTGGCAGCTCTCAAC
CGACGCATCCAGCTGGTGGAGGAGGAGCTGGACAGGGCCCAGGAACGGCTGGCCACCGCCCTGC
AGAAGCTGGAGGAGGCAGAAAAGGCTGCGGATGAGAGCGAGAGGGGAATGAAGGTGATAGAAAA
CCGTGCCATGAAGGACGAGGAGAAGATGGAGATTCAGGAGATGCAGCTCAAAGAGGCCAAGCAC
ATCGCCGAGGAGGCCGACCGCAAGTACGAGGAGGTGGCTCGGAAGCTGGTCATCCTGGAGGGTG
AGCTGGAGAGGGCAGAGGAGCGTGCGGAGGTGTCTGAACTAAAATGTGGGGACCTGGAAGAAGA
ACTCAAGAATGTCACTAACAATCTGAAATCGCTCGAGGCTGCATCTGAGAAGTACTCTGAAAAG
GAGGATAAATATGAAGAAGAAATTAAACTTCTGTCTGACAAGCTGAAGGAGGCCGAGACCCGCG
CTGAATTTGCAGAGAGAACAGTGGCCAAACTGGAAAAGACGATCGACGACCTGGAAGAAAAACT
TGCCCAGGCCAAAGAAGAGAACGTGGGCCTACATCAGACACTGGATCAGACACTAAATGAACTT
AACTGTATATAACCAGAACCGGAAGAGTCTTGTTCCAACAGAAAACCTAGAGCTCCATGTCTTT
CTCTTCTTTTGTAAGAAGTTTTCTTTTGTTATTGCATCTTCGCTTTGCTGGGATTTCAAGCAAA
TTATGATTATGTGACCAAATATTTTGTATCAAAGAAGCTTTGGGCACCAGTTAAATCTAATTCC
TCCCTTTTTTTTTTTTTTTTTTTAATTTCCAAATGGCACCAGCTTTCTGAGCTCTACTTTTATC
CTTAAGTTGCATTTATTCCTAAGGTAGGCAGGGCGTTTCATACGAGCACACTCCCTTCAGATGG
AGGGCTTTGGTTCCTGGGAATATAGTCAACCCCACACTTTCAAGAATAGGCTCCGATGTCTAGT
CATGGGTTGATTAAGATGCTAAAGGGTGTAACGGTTCTGGGTCACTGTTGGCCAAGTTACAGGA
GGCTAGGGACCATCACAATAAAATGGGTAGGGATTTCCCATCCAGAGCAAAAAAAAAAAAAAAG
AAGAGCCAGCGTGGGAAACCATGAACCATAGATAAACCTAGTCATCCCTCGCTTCTCCACACTC
CACTGTGCAGAATACATATCCTTGGAGCAGTCAGCTTGACAGTGCTTGGGAAATAGTCACAATA
TTTACCCAGGGATTGCCTGGAAAATCCTTGATGCTATGTTCTACATTTTTCTTTCATTCTAAAG
TTGTCCTCTGATGAGCAAGTGTCTTACTTATTCTAATAATGACCCAAGCTTGTCGGCTCTTGGG
GCCATACCTGAGCAGGAATACTGTGCAGTACAGTCCTGTTAGGGTCAGCCATATCAAAAAGACT
GCTAGCCATCCATAAATTACACAGAAGAGTTTTTTTTTTTTTTTCCTGTCAACAAACATGTTGG
GCAGAAGGGGTCTCTCTGGCAGCAAAGTAGATATAGAAAAGTAATTGGCCTGACGTCATCTCCA
TCCATCAGGGAATGGCAAATTATCCAAGATTTGAATTCCTTCTTTGGGACCAAGTTAATAAAAG
ACCAAGAAACTCCTGATGAAACTGGATATGGAGAACTTTGAGGCAGGGGCTGCACATTTTGGCT
TTGTTGTATTTTTGCTTTCTCGGTCAACATCTCAGAGCTGAAACATTCCACATTTCCCCAACGG
TGTGGGGACCAACTTGAGTTTACAATTCTGACCAAATTCACCCTGCTTCCAGCTTATCCAAATC
CCCTGCCCCTCACTCCTATTTATTAAGCATCACACTACCCAGGAGATACACTAGCAAATTGTGC
AGCTGAATAAAATCCACACTTTTCTTTAGATTCTTGCGACTGTATCATATGTAATAGTATCACT
TTTTCTACATTTTGGTCAAATAAATTTTTACATAAATGA

hide sequence

RefSeq Acc Id:

XM_021731525 ⟹ XP_021587200

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405118	204,861,872 - 204,874,401 (-)	NCBI
SpeTri2.0	NW_004936596	4,411,011 - 4,423,775 (-)	NCBI

Sequence:

show sequence

ATTACTTAAAGCTGTGATCGAGTCCCCAGCAGGACTAGGGACCCCAGTGAGGTTAAGAACATTT
AGTCCCCAGGACAAGGGAGGGATGCGGAAACCCCTGGGCAGGTCGCATGTCTTGAATGGTGCGT
ACTATTGTTATCCCTGTTTTACAGATGAGGAAACCCATGCCCAGAGAGGAGGGGAGCCAGAGGA
CTTTTGTGGATCTGGGGGCCAACCCTGTACCGCAGGGGCACGGTGGCACCCCAGGCTGATGCGT
CCCCCGATCTGTCCCCAGGTGGAGGAGGAGCTGACGCACCTCCAGAAGAAACTGAAAGGGACAG
AGGATGAGCTGGACAAATACTCGGAGGACCTGAAGGACGCGCAGGAGAAGCTGGAGCTGACGGA
GAAGAAAGCCTCCGACGCCGAAGGTGATGTGGCAGCTCTCAACCGACGCATCCAGCTGGTGGAG
GAGGAGCTGGACAGGGCCCAGGAACGGCTGGCCACCGCCCTGCAGAAGCTGGAGGAGGCAGAAA
AGGCTGCGGATGAGAGCGAGAGGGGAATGAAGGTGATAGAAAACCGTGCCATGAAGGACGAGGA
GAAGATGGAGATTCAGGAGATGCAGCTCAAAGAGGCCAAGCACATCGCCGAGGAGGCCGACCGC
AAGTACGAGGAGGTGGCTCGGAAGCTGGTCATCCTGGAGGGTGAGCTGGAGAGGGCAGAGGAGC
GTGCGGAGGTGTCTGAACTAAAATGTGGGGACCTGGAAGAAGAACTCAAGAATGTCACTAACAA
TCTGAAATCGCTCGAGGCTGCATCTGAGAAGTACTCTGAAAAGGAGGATAAATATGAAGAAGAA
ATTAAACTTCTGTCTGACAAGCTGAAGGAGGCCGAGACCCGCGCTGAATTTGCAGAGAGAACAG
TGGCCAAACTGGAAAAGACGATCGACGACCTGGAAGATGAGCTATATGCCCAGAAGCTCAAGTA
CAAGGCCATCAGCGAGGAGCTGGACCATGCTCTCAACGACATGACCTCTCTCTGAGCCCTAGCA
ATGCCGAAGTCCGCCCTCCCTCTGTGGGGGGGGCCTGCGCTCCTGTCTCCTGGTCTGATCTTTC
ACGGCCTCTTCTGACGTGTCTGTGACTCTGGGTGAATAAAGACAGGCCACCCTCGTCTTCTTTC
CTCA

hide sequence

Protein Sequences


Protein RefSeqs	XP_021587199	(Get FASTA)	NCBI Sequence Viewer
	XP_021587200	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000019886.2

RefSeq Acc Id:

XP_021587199 ⟸ XM_021731524

- Peptide Label:

isoform X1

- Sequence:

show sequence

MRPPICPQVEEELTHLQKKLKGTEDELDKYSEDLKDAQEKLELTEKKASDAEGDVAALNRRIQL
VEEELDRAQERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEA
DRKYEEVARKLVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKEDKYE
EEIKLLSDKLKEAETRAEFAERTVAKLEKTIDDLEEKLAQAKEENVGLHQTLDQTLNELNCI

hide sequence

RefSeq Acc Id:

XP_021587200 ⟸ XM_021731525

- Peptide Label:

isoform X2

- Sequence:

show sequence

MRKPLGRSHVLNGAYYCYPCFTDEETHAQRGGEPEDFCGSGGQPCTAGARWHPRLMRPPICPQV
EEELTHLQKKLKGTEDELDKYSEDLKDAQEKLELTEKKASDAEGDVAALNRRIQLVEEELDRAQ
ERLATALQKLEEAEKAADESERGMKVIENRAMKDEEKMEIQEMQLKEAKHIAEEADRKYEEVAR
KLVILEGELERAEERAEVSELKCGDLEEELKNVTNNLKSLEAASEKYSEKEDKYEEEIKLLSDK
LKEAETRAEFAERTVAKLEKTIDDLEDELYAQKLKYKAISEELDHALNDMTSL

hide sequence

Ensembl Acc Id:

ENSSTOP00000019886 ⟸ ENSSTOT00000019734

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000024252	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000019734.2	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.170	UniProtKB/TrEMBL
	1.20.5.370	UniProtKB/TrEMBL
InterPro	Tropomyosin	UniProtKB/TrEMBL
	XRCC4-like_C	UniProtKB/TrEMBL
NCBI Gene	Tpm4	ENTREZGENE
PANTHER	TROPOMYOSIN	UniProtKB/TrEMBL
	TROPOMYOSIN 4-RELATED	UniProtKB/TrEMBL
Pfam	Tropomyosin	UniProtKB/TrEMBL
PRINTS	TROPOMYOSIN	UniProtKB/TrEMBL
PROSITE	TROPOMYOSIN	UniProtKB/TrEMBL
Superfamily-SCOP	Tropomyosin	UniProtKB/TrEMBL
UniProt	I3N690_ICTTR	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM