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Gene: Dennd4c (DENN domain containing 4C) Ictidomys tridecemlineatus

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Symbol:

Dennd4c

Name:

DENN domain containing 4C

RGD ID:

12554833

Description:

ENCODES a protein that exhibits guanyl-nucleotide exchange factor activity (inferred); INVOLVED IN cellular response to insulin stimulus (inferred); protein localization to plasma membrane (inferred); regulation of Rab protein signal transduction (inferred); PARTICIPATES IN insulin responsive facilitative sugar transporter mediated glucose transport pathway; Rab family mediated signaling pathway; FOUND IN cytoplasm (inferred); cytoplasmic vesicle (inferred); cytosol (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

DENN domain-containing protein 4C

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	153,479,598 - 153,581,391 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936652	1,149,099 - 1,250,921 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936652	1,149,106 - 1,250,571 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to insulin stimulus (IEA)

protein localization to plasma membrane (IEA)

regulation of Rab protein signal transduction (IEA)

Cellular Component

cytoplasm (IEA)

cytoplasmic vesicle (IEA)

cytosol (IEA)

Golgi apparatus (IEA)

insulin-responsive compartment (IEA)

intracellular membrane-bounded organelle (IEA)

plasma membrane (IEA)

retromer complex (IEA)

Molecular Function

guanyl-nucleotide exchange factor activity (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

insulin responsive facilitative sugar transporter mediated glucose transport pathway (ISO)

Rab family mediated signaling pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Dennd4c
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	153,479,598 - 153,581,391 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936652	1,149,099 - 1,250,921 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936652	1,149,106 - 1,250,571 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

DENND4C
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	9	19,230,513 - 19,374,281 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	9	19,230,435 - 19,374,281 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	9	19,230,511 - 19,374,279 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	9	19,280,749 - 19,364,139 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	9	19,288,065 - 19,362,856	NCBI
Celera	9	19,216,854 - 19,300,236 (+)	NCBI		Celera
Cytogenetic Map	9	p22.1	NCBI
HuRef	9	19,192,829 - 19,335,696 (+)	NCBI		HuRef
CHM1_1	9	19,230,600 - 19,373,937 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	9	19,243,303 - 19,387,084 (+)	NCBI		T2T-CHM13v2.0

Dennd4c
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	86,666,761 - 86,768,841 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	86,666,792 - 86,768,840 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	86,748,518 - 86,850,603 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	86,748,555 - 86,850,603 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	86,394,459 - 86,476,071 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	86,219,786 - 86,321,834 (+)	NCBI		MGSCv36	mm8
Celera	4	85,265,548 - 85,350,171 (+)	NCBI		Celera
Cytogenetic Map	4	C4	NCBI
cM Map	4	40.69	NCBI

Dennd4c
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	106,316,942 - 106,421,484 (+)	NCBI		GRCr8
mRatBN7.2	5	101,272,298 - 101,369,529 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	101,272,005 - 101,368,118 (+)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	5	105,100,081 - 105,195,634 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	105,114,433 - 105,193,988 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	109,085,833 - 109,182,502 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	106,090,415 - 106,162,420 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	106,090,717 - 106,167,026 (+)	NCBI
Celera	5	101,714,237 - 101,809,916 (-)	NCBI		Celera
Cytogenetic Map	5	q32	NCBI

Dennd4c
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955434	21,639,986 - 21,740,842 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955434	21,640,068 - 21,740,842 (+)	NCBI	ChiLan1.0	ChiLan1.0

DENND4C
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	11	105,172,746 - 105,309,405 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	9	105,178,690 - 105,315,282 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	9	19,046,857 - 19,183,364 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	9	19,537,938 - 19,672,299 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	9	19,537,997 - 19,672,299 (+)	Ensembl	panpan1.1		panPan2

DENND4C
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	11	39,035,241 - 39,161,135 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	11	39,072,944 - 39,159,611 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	11	37,693,992 - 37,818,852 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	11	39,968,568 - 40,094,556 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	11	39,968,663 - 40,093,014 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	11	38,661,590 - 38,786,923 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	11	38,456,479 - 38,584,445 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	11	39,093,527 - 39,218,421 (+)	NCBI		UU_Cfam_GSD_1.0

DENND4C
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	203,449,835 - 203,601,292 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	203,449,832 - 203,601,298 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	227,100,329 - 227,251,158 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

DENND4C
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	12	60,359,979 - 60,499,631 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	12	60,361,914 - 60,499,713 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	48,473,266 - 48,616,996 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Dennd4c
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624736	23,233,444 - 23,326,780 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624736	23,206,686 - 23,328,391 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_013363189	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021733684	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021733685	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021733686	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040285841	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040285842	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040285843	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000006	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000025867 ⟹ ENSSTOP00000019519

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936652	1,149,099 - 1,250,921 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000028664 ⟹ ENSSTOP00000016845

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936652	1,164,404 - 1,249,420 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000038260 ⟹ ENSSTOP00000027024

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936652	1,216,217 - 1,250,921 (+)	Ensembl

Ensembl Acc Id:

ENSSTOT00000042816 ⟹ ENSSTOP00000026415

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936652	1,149,099 - 1,250,921 (+)	Ensembl

RefSeq Acc Id:

XM_013363189 ⟹ XP_013218643

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	153,479,598 - 153,581,391 (+)	NCBI
SpeTri2.0	NW_004936652	1,149,111 - 1,250,571 (+)	NCBI

Sequence:

show sequence

AGGGAACAGAAACATGGCGGTCAGCTGTCGGGACGGCCACGCCGCTGGCAGCTCTTAGGCCATC
CTCCGTTCACACTGTCCCGCCGCCCCGAGAGTCGCGGTGCCGGCACCGGTCGGTGCCCTAGGCC
GTTACCCCTAGTGCGGGCGGCGCCCCCTGAGACCCAACCCGCGAAGCGGCGCAGGCGCAGATCG
GCCGAGGCGGCCGAGGCCGCTGGAACGAGTCCCCGGCTCTGCTCTTCGCTGCAGAAGGCGCCCA
GGCCGAGAAGCCGGCACTTTCATGCCCCAGGAAGGCGCCTTGTCGAGGGGGTGCTGACGCGGGA
GCCGGCGGCAGGAAGTAGAATAGCAGCCATGATCGAAGACAAAGGACCAAGAGTGACAGACTAC
TTTGTTGTGGCAGGTCTCACTGATACATCTACTCTTTTGGATCAAGAGATAAATCGTTTAGATA
CTAAGTCAACAGGACCTAAAGCTCCAATTACAGACATTGCCATTATCATCAAATCAGCTGGGGA
AACAGTACCTGAAGGTTACACCTGTGTTGAAGCCACTCCATCAGCTCTCCAAGCAAACTTGAAC
TATGGAAGTCTAAAAAGTCCAGAACTTTTCTTGTGTTATAAGAGAGGAAGAGATAAACCACCCC
TTACAGATATTGGAGTTATATATGAAGGGAAAGAAAGACTTATTCCAGGATGTGAAGTGATCCA
AGCCACGCCCTATGGTCGCTGTGCCAATGTCAACAATAGTTCAACTACTTCACAAAGAATCTTT
ATCACTTATCGAAGGGCTCCTCTAATTCGACCCCAGAATTCCTTGGCAGTTACTGATATCTGTG
TCATTGTAACCAGCAAAGGAGAAACCCCTCCTCATACCTTCTGCAAAGTTGACAAAAACTTAAA
TTGTGGAATGTGGGGTTCCAGTGTATTTCTATGTTACAAGAAGTCTGTGCCTGCTTCAAATGCA
ATAGCATATAAAGCTGGTTTAATTTTTAGGTATCCAGAAGATGACTATGAATCCTTTCCACTCT
CAGAATCTGTACCTCTTTTCTGCCTTCCTATGGGAGCCACTATTGAATGTTGGGATCCTCAAAC
CAAATATCCACTTCCAGTTTTTTCAACTTTTGTCCTGACAGGTTCTTCAGCTGAAAAGGTATAT
GGAGCTGCCATCCAGTTTTACGAACCATATTCTCGGGAACTTCTAACAGAGAAACAGCTTATGC
AGCTGGGCTTGTTGACGCCTGTGGAGAGAAAAGTGATCTCTAAATCCATCAATTCAAACAAATG
CATTTGTTTACTCTCACACTGGCCTTTTTTTGATGCTTTTAGAAAGTTTCTTATGTTTATCTAC
AAACTTTCTGTGTCTGGACCACATCCTCTTCCCATTGAAAAGCATATTTCACATTTTATGCAAA
ACATCCCTTTTCCTTCACCGCAAAGACCAAGAATCCTTGTACAGCTGTCAGTCCATGATGCATT
AATATTATCACAGCCAGTTTCTACACCTTTACCACTAAGTGGAGCCAACTTTAGTACCTTGCTG
ATGAATCTGGGTCCTGAGAATTGTGCGACACTACTGCTCTTAGTTTTACTTGAGAGTAAGATTC
TGCTGCATTCTCTTAGGCCAGCTGTATTGACTGGGGTAGCTGAAGCTGTTGTAGCTATGATCTT
TCCATTTCAGTGGCAATGCCCATATATTCCCCTTTGTCCTCTTTCACTGGCTGGAGTGCTTAGT
GCACCTTTACCATTTATAGTTGGAGTTGACTCAAGGTATTTTGATCTTCATGACCCACCACCAG
ATGTTGTTTGCATTGACTTGGATACGAACATGTTATATGTATCAGATGAAAAGAAGAACATGAA
CTGGAAACAGCTACCTAAAAAGCCATGCAAAAATCTACTTAGCACTTTAAAGAAACTGTATTCC
CAGCTATCTACAGTTCACCGGAAAACTCAAGAAGGTTCAGCCATTGAAATGACTCCAATTGAAG
CAGATTTCTCCTGGCAAAAAAAGATGACACAACTTGAGATGGAAATTCAAGAGGCATTTTTGCG
ATTTATGGCATCTGTTTTAAAAGGATATAGAACATATCTCAAACCAATCACAGAGGCTCCTTCA
AATAAAGCCACAGCTGTAGATTCATTGTTTGATCGACAAGGATTTATAAAAAGTCGAGATCGGG
CCTATACAAAATTCTATACCCTTTTATCCAAAACACAGATCTTTATTCGTTTTATTGAAGAATG
CAGTTTTGTAAGTGATAAAGATACTGGATTGGCATTTTTTGATGACTGCATAGAGAAGTTGTTT
CCTGATAAAGGCACAGAGAAAACAGAAAAGGTTGATTTTGACCTAGCAGAAGATACCAAATTAA
TAGAATTAGATGATTCACAGAAAAGTGAACATACTGTATTAATAATGCCACCTGAGCCACCTCC
TGATGATGGAAAGGACCTCTCACCAAAGTACAGTTACAAATATTTTCCAAGACTGGACCTTAAA
CTTTTTGACAGACCACAGGAGTTGAAACTTTGTTTTAGTAGACACCCTACTGGGAATAGCATTA
CAAACAGTCCAGCTCTCATGGCTAAAAGAACTAAACAGGAGATTAAAACAGCTCATAAATTGGC
AAGGAGATGTTATACAAATCCACCACAGTGGGCCAAGTGTCTGTTCAGTCATTGTTACAGTTTA
TGGTTCATTTGTCTCCCAGCCTATGTTAGAGTTTCTCATCCTAAGGTCAGAGCACTTCAACAGG
CATATGATATACTTATCAAGATGAGAAAAACAGATGTGGATCCACTGGATGAGGTGTGCTATCG
AGTAGTAATGCAGCTTTGTGGACTTTGGGGTCATCCTGTTTTAGCAGTGAGAGTCTTATTTGAA
ATGAAAACTGCTAAGATAAAACCAAATGCCATTACTTATGGTTATTATAATAAGGTAGTTTTGG
AGAGCCCATGGCCTAGCAGTACTCGCAGTGGTATTTTCTTATGGACAAAGGTACGGAATGTAGT
ACGTGGCTTGGCACAATTTAGGCAGCCACTTAAAAAGACCATTCAAAAGTCCCTGGCATCCTCA
ATATCAGTTCCTCAGAATGCCACAGGTGGAAGTGATGGGGACACGGTGAGCCACGGTAGCGTGG
ATAGTTCTAATGATGCTAACAATGGGGAGCACACAGTCTTCGTCAGAGATTTAATCAGGCTTGA
TTCCATTGATAATCACTCTAGCACAGGTGGTCAGTCTGACCAAGGCTATGGGTCTAAGGATGAA
CTTATAAAGGACGAAGCAGAAATTCACGTGCCTGAAGAACATATAGCACCAGAGTTGGTAACTA
AAATGAACGTGCAAGTAGAAGAGGTGTGTGATGTGTCTGCTATTGTGGTAAAACATTCACAACC
TAGTCCAGAGTCTCAGAGTCCTAATGAACCTCCTTCATGGGGCAGCAGTATTGTGAAAGTTTCA
TCTGGTATATTTGATGTCAACAACAGAAAAAGTAGTACTGGTAGTACATCAAATGTTCTATTTT
CTACACAAGATCTAGTTGAAGATGCAGTCTTTGGTGAAGTTTCTAATCTCAAGAAGAATGGTGA
TAGAGGAGAAAAAAGACAAAAGCATTTTCCAGAAAGGAGTTGTAGTTTTAGTTCTGAAAGTCGA
GCAGGAATGCTACTTAAGAAAAGCAGTTTGGATTTGAATTCAAATGAAATGGCTATCATGATGG
GAGCAGATGCCAAGATTCTTACAGCAGCATTGACATGTCCTAAGGCTTCTCCACTTCATATGGC
AAGAACTCATAGTTTCGAGAATGTTAGCTGTCACCTAGCTGATACTAGGACCCGTGTCTCTGAA
AGTAGTTGGGATTCTGAGCACAGATCATCTGCTGTCCTAGAGATGCTTGAGGAAAGCCAAGAGC
TCATAGAGCCTGTGGTTGATGATAATATAGCTAAAACTAGTACAACAAAGATGACATATGATAG
TCAACAACATGATAGTAACAGTAATCAGTCCAGAGACTTGAAAGCAGAATCCAAAGATCTGATG
AATAAGAGAAGTAGTGTATATGGTGTTGCTAAAGCTGTTGAAAGGGAGGATGTTGAAACTGGAC
TAGATCCTTTGTCTCTTTTAGCCACTGAATCTATAGAAGAAAAGCCTCCTGATTCTGAAGATAA
AATGTTTTCTCCAGTTATTGCACGTAATCTGGCTGATGAAATTGAGAGCTACATGAACTTAAAA
AGTCCCCTGGGTAGTAAATCTTCTAGTATGGAATTGCACCGAGAGGAAAGCAGAGAATCTGGCA
CTACTACTACATTTATGCACCCTTTAGAGAGAAGATCAAGCCTACCATTAGATAATAGCCCACC
AGCCCAGGAAAATCCTAAAAGTGAGAAGAGTTCTCCTGCAGTGTCCAGGTCTAAAACTTTTACT
GGACGTTTCAAGCAGCACACTCCCTATCGGACTTACAAAGATCGTTCACCTTTATCTGCATTGG
TTCGTTCTTCACCACATGGCTCATTGGGTTCTGTAGTAAATTCTTTGTCAGGGCTAAAGCTGGA
TAATCTACTCTCAGGGCCCAAGATAGATGTCCTAAAATCTGGTATGAAACAAGCAGCAACAGTA
GCCAGTAAGATGTGGGTGGCTGTAGCATCTGCCTACAACTACTCAGATGACGAGGAGGAAATTA
ATAGAGATTACAGCTTCCCAGCTGGCTTGGAAGACCATATTTTGGGGGAAAATGTATCTCCTAA
CACAAGTATCTCAGGGTTGGTCCCTAGTGAACTTACCCAAAGCAACACAAGCCTTGGCAGTAGC
AGCAGCAGTGGAGATATTGGAAAACTACATTATTCAACAGGTGAAGTTTCATTTCCAAGAGGCA
TAAAAGGGCAGGACTTTGAAAAATCAGACCATGGTTCATCCCAAAATACCAGCATGTCTAGCAT
CTATCAGAATTGTGCAATGGAGGTTTTGATGTCAAGTTGTTCACAATGTAGAACTTGTGGAGCT
TTGGTTTATGATGAAGAAATTATGGCTGGATGGACAGCAGATGATTCAAATTTGAATACAACAT
GTCCATTCTGTAAAAGCAACTTCTTGCCTCTTCTCAATATAGAATTTAAAGACTTGAGAGGCTC
TGCAAGCTTTTTCTTGAAACCAAGTACCTCTGGTGACAGTTTACAAAGTGGCAGCCTTCCTCTA
GCAAGTGAACCCTTGGAGCACAGACCTGTATGCAGTTCAGCAGAACCTGAGTTGATTAACTTTA
TGGATTTCCCAAAACCTAAACAGACCATAACTGAAGAAACAAGCTATGCAGTTGAATCAAGTGA
TGAAATAAAGAAAATCAGTGGAGATGTCCAAACTGTGCAAGTGCCATCTGTGCCTAATAGTTTA
TCAAAGCGAAATGTACCTTTGACTCGAAGTCACAGTGTTGGAGGCCCTTTGCAAAACATTGACT
TTTCCCAACGACCATTTCATGGCATTTCAACAGTTAGTCTTCCAAACAGTCTGCAGGAAGTTGT
GGATCCTTTAGGAAAAAGGCCCAATCCTCCCCCTGTTTCTGTACCCTATTTGAGTCCTCTAGTG
CTTCGTAAGGAACTTGAATCTTTGCTAGAAAATGAAGGTGATCAGGTGATTCATACATCCTCTT
TCATCAATCAACATCCAATCATTTTCTGGAACCTTGTTTGGTATTTCAGACGTTTAGACCTTCC
TAGTAACTTGCCAGGACTTATTCTCACATCTGAACACTGTAACGAAGGTATACAGCTTCCTTTA
TCATCTCTGTCCCAGGATAGCAAACTTGTCTATATTCAACTCTTATGGGATAATATCAACCTTC
ATCAAGAACCAGGAGAACCTCTGTATGTCTCTTGGAGGAATTTTAATTCTGAAAAGAAATTATC
CCTCCTGTCAGAGGAACAACAAGCAACAAGCACTTTAGTTGAAACTATTAGGCAGAGTATTCAG
CATAATGATGTTCTTAAGCCCATCAATCTGCTGTCTGAGCAAATGAAGCCAGAAATGAAAAGAC
AAAGGAGTTTATACAGAGAAATACTCTTCTTATCATTAGTGTCTCTTGGAAGAGAAAATATTGA
TATTGAGGCTTTTGACAATGAATATGGACTCGCATACAATAGTCTACCTTCAGAGGTTCTTGAA
AAGTTACAGAAAATTGATGCCCCACCAAGTGTTAGTGTGGAATGGTGCAGAAAATGTTTTGGAG
CGCCTCTCATTTAAAGAGATTCAATAGAATTTTGATATAGTGCTGGAGAATAAATTGAAAATAT
CCAAGGTTTTTCCACATACTAGGAATTGGTGAAAACTGAAATAACTCTTGGGGGACAATATACA
ATGAATTGTAAATAATATTGAATTATATCAAAGTGTAAAATCTCATTTAAATGCCCTGAAGTTT
ATTAATATTGAAGATTTTCAACTCCTGAACTGTTTCTCTGCTTCTGCTGGAACTGTTTTGGATT
TCTCTATATTTGTGGTTAGTTTTATAGAAACGAGAAACCATTCATCCCAGACATTTGTTAATAT
TTGAAGCTGTTGGGTTTGGGGAATGGGAAATGAAACTTGCCTAACCCCCAAACAAATGAAATAT
CTTAATTATAAGAGCTACTACTTGTGTATGACTGTAAATGTGTAGGGTTGTATAGGTATGTGTA
TATTATAAGTGTGTATTTATTAAAACTCATAGATTGCATGTTGCAATAGTTTTCTGAAAGGGGT
CTCATTGTTAAATAAATGACTACTACTAATCTCATTGGTAGTCAAAATTACCTGATCTGACTTT
AAATTTAATATATGTCTTCACCTTTTTAATTATGTATTACCTTGCTTAATGGATATGTTGAATA
TCTAGGTACTTCCTTCATCCTCTTCCCATGTTAACTTGCAAGGGCTTTAAAATTAGAAGTCAAA
CAGTCAAAATGAAATTAACTAAAGTTCATAACTTATGAAGCTATTTGTAAGTTTTGAGTTATGC
TGAAAATGCAAAAGTGTATATTGTCTTAGGTCCTGAAGTCTTTGTTCAGGCATGTAAATTGTTG
CTGTTGATCACCTTTTGAAACCTGTGGGATAAACTTGCACTGCACACTAAAGTTTTATTCTTGT
ACAATATTTAGATTTATATGCCTATGAGTAAAAATGTGCATTTGTAAATAATTTTTTAGGTTGA
ATCAATTAAGTCTTATAACTTTAAAGCTTGAGTTTGTTGTCACTAGTTTTAAGTAAATTATGGC
CTCACTTTGACATTTATCATGTTTTTTTTCGTTGTTAAAAATGCCCATTACAGTAAGTTTGCCT
TAACTCTGCATAGTTTAAAAAGCCAGTGGTTTTATGTGTGCTTTTATAATTATGCAGACTAAAT
CATTTGATACACA

hide sequence

RefSeq Acc Id:

XM_021733685 ⟹ XP_021589360

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	153,504,812 - 153,581,391 (+)	NCBI
SpeTri2.0	NW_004936652	1,173,764 - 1,249,808 (+)	NCBI

Sequence:

show sequence

TGGGGTTCCAGTGTATTTCTATGTTACAAGAAGTCTGTGCCTGCTTCAAATGCAATAGCATATA
AAGCTGTGGACTTGCTTCCTTTCTTGTTGCAAAGAATCAGCTATATGGAGGAGAGGAGGGCCTG
AGAAACTTTTCTGCCATGAAGTTTTTGAGAAATCTATCGCCACATTCTTACTGCACAGTAAAGT
GTCAAGGGCTGTAAAGATTTAAGTGTGACCTCTTCATCCCACTGGTATGGTGGGATAAAAACTG
AAAATACAGGTTTAATTTTTAGGTATCCAGAAGATGACTATGAATCCTTTCCACTCTCAGAATC
TGTACCTCTTTTCTGCCTTCCTATGGGAGCCACTATTGAATGTTGGGATCCTCAAACCAAATAT
CCACTTCCAGTTTTTTCAACTTTTGTCCTGACAGGTTCTTCAGCTGAAAAGGTATATGGAGCTG
CCATCCAGTTTTACGAACCATATTCTCGGGAACTTCTAACAGAGAAACAGCTTATGCAGCTGGG
CTTGTTGACGCCTGTGGAGAGAAAAGTGATCTCTAAATCCATCAATTCAAACAAATGCATTTGT
TTACTCTCACACTGGCCTTTTTTTGATGCTTTTAGAAAGTTTCTTATGTTTATCTACAAACTTT
CTGTGTCTGGACCACATCCTCTTCCCATTGAAAAGCATATTTCACATTTTATGCAAAACATCCC
TTTTCCTTCACCGCAAAGACCAAGAATCCTTGTACAGCTGTCAGTCCATGATGCATTAATATTA
TCACAGCCAGTTTCTACACCTTTACCACTAAGTGGAGCCAACTTTAGTACCTTGCTGATGAATC
TGGGTCCTGAGAATTGTGCGACACTACTGCTCTTAGTTTTACTTGAGAGTAAGATTCTGCTGCA
TTCTCTTAGGCCAGCTGTATTGACTGGGGTAGCTGAAGCTGTTGTAGCTATGATCTTTCCATTT
CAGTGGCAATGCCCATATATTCCCCTTTGTCCTCTTTCACTGGCTGGAGTGCTTAGTGCACCTT
TACCATTTATAGTTGGAGTTGACTCAAGGTATTTTGATCTTCATGACCCACCACCAGATGTTGT
TTGCATTGACTTGGATACGAACATGTTATATGTATCAGATGAAAAGAAGAACATGAACTGGAAA
CAGCTACCTAAAAAGCCATGCAAAAATCTACTTAGCACTTTAAAGAAACTGTATTCCCAGCTAT
CTACAGTTCACCGGAAAACTCAAGAAGGTTCAGCCATTGAAATGACTCCAATTGAAGCAGATTT
CTCCTGGCAAAAAAAGATGACACAACTTGAGATGGAAATTCAAGAGGCATTTTTGCGATTTATG
GCATCTGTTTTAAAAGGATATAGAACATATCTCAAACCAATCACAGAGGCTCCTTCAAATAAAG
CCACAGCTGTAGATTCATTGTTTGATCGACAAGGATTTATAAAAAGTCGAGATCGGGCCTATAC
AAAATTCTATACCCTTTTATCCAAAACACAGATCTTTATTCGTTTTATTGAAGAATGCAGTTTT
GTAAGTGATAAAGATACTGGATTGGCATTTTTTGATGACTGCATAGAGAAGTTGTTTCCTGATA
AAGGCACAGAGAAAACAGAAAAGGTTGATTTTGACCTAGCAGAAGATACCAAATTAATAGAATT
AGATGATTCACAGAAAAGTGAACATACTGTATTAATAATGCCACCTGAGCCACCTCCTGATGAT
GGAAAGGACCTCTCACCAAAGTACAGTTACAAATATTTTCCAAGACTGGACCTTAAACTTTTTG
ACAGACCACAGGAGTTGAAACTTTGTTTTAGTAGACACCCTACTGGGAATAGCATTACAAACAG
TCCAGCTCTCATGGCTAAAAGAACTAAACAGGAGATTAAAACAGCTCATAAATTGGCAAGGAGA
TGTTATACAAATCCACCACAGTGGGCCAAGTGTCTGTTCAGTCATTGTTACAGTTTATGGTTCA
TTTGTCTCCCAGCCTATGTTAGAGTTTCTCATCCTAAGGTCAGAGCACTTCAACAGGCATATGA
TATACTTATCAAGATGAGAAAAACAGATGTGGATCCACTGGATGAGGTGTGCTATCGAGTAGTA
ATGCAGCTTTGTGGACTTTGGGGTCATCCTGTTTTAGCAGTGAGAGTCTTATTTGAAATGAAAA
CTGCTAAGATAAAACCAAATGCCATTACTTATGGTTATTATAATAAGGTAGTTTTGGAGAGCCC
ATGGCCTAGCAGTACTCGCAGTGGTATTTTCTTATGGACAAAGGTACGGAATGTAGTACGTGGC
TTGGCACAATTTAGGCAGCCACTTAAAAAGACCATTCAAAAGTCCCTGGCATCCTCAATATCAG
TTCCTCAGAATGCCACAGGTGGAAGTGATGGGGACACGGTGAGCCACGGTAGCGTGGATAGTTC
TAATGATGCTAACAATGGGGAGCACACAGTCTTCGTCAGAGATTTAATCAGGCTTGATTCCATT
GATAATCACTCTAGCACAGGTGGTCAGTCTGACCAAGGCTATGGGTCTAAGGATGAACTTATAA
AGGACGAAGCAGAAATTCACGTGCCTGAAGAACATATAGCACCAGAGTTGGTAACTAAAATGAA
CGTGCAAGTAGAAGAGGTGTGTGATGTGTCTGCTATTGTGGTAAAACATTCACAACCTAGTCCA
GAGTCTCAGAGTCCTAATGAACCTCCTTCATGGGGCAGCAGTATTGTGAAAGTTTCATCTGGTA
TATTTGATGTCAACAACAGAAAAAGTAGTACTGGTAGTACATCAAATGTTCTATTTTCTACACA
AGATCTAGTTGAAGATGCAGTCTTTGGTGAAGTTTCTAATCTCAAGAAGAATGGTGATAGAGGA
GAAAAAAGACAAAAGCATTTTCCAGAAAGGAGTTGTAGTTTTAGTTCTGAAAGTCGAGCAGGAA
TGCTACTTAAGAAAAGCAGTTTGGATTTGAATTCAAATGAAATGGCTATCATGATGGGAGCAGA
TGCCAAGATTCTTACAGCAGCATTGACATGTCCTAAGGCTTCTCCACTTCATATGGCAAGAACT
CATAGTTTCGAGAATGTTAGCTGTCACCTAGCTGATACTAGGACCCGTGTCTCTGAAAGTAGTT
GGGATTCTGAGCACAGATCATCTGCTGTCCTAGAGATGCTTGAGGAAAGCCAAGAGCTCATAGA
GCCTGTGGTTGATGATAATATAGCTAAAACTAGTACAACAAAGATGACATATGATAGTCAACAA
CATGATAGTAACAGTAATCAGTCCAGAGACTTGAAAGCAGAATCCAAAGATCTGATGAATAAGA
GAAGTAGTGTATATGGTGTTGCTAAAGCTGTTGAAAGGGAGGATGTTGAAACTGGACTAGATCC
TTTGTCTCTTTTAGCCACTGAATCTATAGAAGAAAAGCCTCCTGATTCTGAAGATAAAATGTTT
TCTCCAGTTATTGCACGTAATCTGGCTGATGAAATTGAGAGCTACATGAACTTAAAAAGTCCCC
TGGGTAGTAAATCTTCTAGTATGGAATTGCACCGAGAGGAAAGCAGAGAATCTGGCACTACTAC
TACATTTATGCACCCTTTAGAGAGAAGATCAAGCCTACCATTAGATAATAGCCCACCAGCCCAG
GAAAATCCTAAAAGTGAGAAGAGTTCTCCTGCAGTGTCCAGGTCTAAAACTTTTACTGGACGTT
TCAAGCAGCACACTCCCTATCGGACTTACAAAGATCGTTCACCTTTATCTGCATTGGTTCGTTC
TTCACCACATGGCTCATTGGGTTCTGTAGTAAATTCTTTGTCAGGGCTAAAGCTGGATAATCTA
CTCTCAGGGCCCAAGATAGATGTCCTAAAATCTGGTATGAAACAAGCAGCAACAGTAGCCAGTA
AGATGTGGGTGGCTGTAGCATCTGCCTACAACTACTCAGATGACGAGGAGGAAATTAATAGAGA
TTACAGCTTCCCAGCTGGCTTGGAAGACCATATTTTGGGGGAAAATGTATCTCCTAACACAAGT
ATCTCAGGGTTGGTCCCTAGTGAACTTACCCAAAGCAACACAAGCCTTGGCAGTAGCAGCAGCA
GTGGAGATATTGGAAAACTACATTATTCAACAGGTGAAGTTTCATTTCCAAGAGGCATAAAAGG
GCAGGACTTTGAAAAATCAGACCATGGTTCATCCCAAAATACCAGCATGTCTAGCATCTATCAG
AATTGTGCAATGGAGGTTTTGATGTCAAGTTGTTCACAATGTAGAACTTGTGGAGCTTTGGTTT
ATGATGAAGAAATTATGGCTGGATGGACAGCAGATGATTCAAATTTGAATACAACATGTCCATT
CTGTAAAAGCAACTTCTTGCCTCTTCTCAATATAGAATTTAAAGACTTGAGAGGCTCTGCAAGC
TTTTTCTTGAAACCAAGTACCTCTGGTGACAGTTTACAAAGTGGCAGCCTTCCTCTAGCAAGTG
AACCCTTGGAGCACAGACCTGTATGCAGTTCAGCAGAACCTGAGTTGATTAACTTTATGGATTT
CCCAAAACCTAAACAGACCATAACTGAAGAAACAAGCTATGCAGTTGAATCAAGTGATGAAATA
AAGAAAATCAGTGGAGATGTCCAAACTGTGCAAGTGCCATCTGTGCCTAATAGTTTATCAAAGC
GAAATGTACCTTTGACTCGAAGTCACAGTGTTGGAGGCCCTTTGCAAAACATTGACTTTTCCCA
ACGACCATTTCATGGCATTTCAACAGTTAGTCTTCCAAACAGTCTGCAGGAAGTTGTGGATCCT
TTAGGAAAAAGGCCCAATCCTCCCCCTGTTTCTGTACCCTATTTGAGTCCTCTAGTGCTTCGTA
AGGAACTTGAATCTTTGCTAGAAAATGAAGGTGATCAGGTGATTCATACATCCTCTTTCATCAA
TCAACATCCAATCATTTTCTGGAACCTTGTTTGGTATTTCAGACGTTTAGACCTTCCTAGTAAC
TTGCCAGGACTTATTCTCACATCTGAACACTGTAACGAAGGTATACAGCTTCCTTTATCATCTC
TGTCCCAGGATAGCAAACTTGTCTATATTCAACTCTTATGGGATAATATCAACCTTCATCAAGA
ACCAGGAGAACCTCTGTATGTCTCTTGGAGGAATTTTAATTCTGAAAAGAAATTATCCCTCCTG
TCAGAGGAACAACAAGCAACAAGCACTTTAGTTGAAACTATTAGGCAGAGTATTCAGCATAATG
ATGTTCTTAAGCCCATCAATCTGCTGTCTGAGCAAATGAAGCCAGAAATGAAAAGACAAAGGAG
TTTATACAGAGAAATACTCTTCTTATCATTAGTGTCTCTTGGAAGAGAAAATATTGATATTGAG
GCTTTTGACAATGAATATGGACTCGCATACAATAGTCTACCTTCAGAGGTTCTTGAAAAGTTAC
AGAAAATTGATGCCCCACCAAGTGTTAGTGTGGAATGGTGCAGAAAATGTTTTGGAGCGCCTCT
CATTTAAAGAGATTCAATAGAATTTTGATATAGTGCTGGAGAATAAATTGAAAATATCCAAGGT
TTTTCCACATACTAGGAATTGGTGAAAACTGAAATAACTCTTGGGGGACAATATACAATGAATT
GTAAATAATATTGAATTATATCAAAGTGTAAAATCTCATTTAAATGCCCTGAAGTTTATTAATA
TTGAAGATTTTCAACTCCTGAACTGTTTCTCTGCTTCTGCTGGAACTGTTTTGGATTTCTCTAT
ATTTGTGGTTAGTTTTATAGAAACGAGAAACCATTCATCCCAGACATTTGTTAATATTTGAAGC
TGTTGGGTTTGGGGAATGGGAAATGAAACTTGCCTAACCCCCAAACAAATGAAATATCTTAATT
ATAAGAGCTAC

hide sequence

RefSeq Acc Id:

XM_021733686 ⟹ XP_021589361

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	153,479,598 - 153,566,687 (+)	NCBI
SpeTri2.0	NW_004936652	1,149,106 - 1,236,083 (+)	NCBI

Sequence:

show sequence

GAAAAAGGGAACAGAAACATGGCGGTCAGCTGTCGGGACGGCCACGCCGCTGGCAGCTCTTAGG
CCATCCTCCGTTCACACTGTCCCGCCGCCCCGAGAGTCGCGGTGCCGGCACCGGTCGGTGCCCT
AGGCCGTTACCCCTAGTGCGGGCGGCGCCCCCTGAGACCCAACCCGCGAAGCGGCGCAGGCGCA
GATCGGCCGAGGCGGCCGAGGCCGCTGGAACGAGTCCCCGGCTCTGCTCTTCGCTGCAGAAGGC
GCCCAGGCCGAGAAGCCGGCACTTTCATGCCCCAGGAAGGCGCCTTGTCGAGGGGGTGCTGACG
CGGGAGCCGGCGGCAGGAAGTAGAATAGCAGCCATGATCGAAGACAAAGGACCAAGAGTGACAG
ACTACTTTGTTGTGGCAGGTCTCACTGATACATCTACTCTTTTGGATCAAGAGATAAATCGTTT
AGATACTAAGTCAACAGGACCTAAAGCTCCAATTACAGACATTGCCATTATCATCAAATCAGCT
GGGGAAACAGTACCTGAAGGTTACACCTGTGTTGAAGCCACTCCATCAGCTCTCCAAGCAAACT
TGAACTATGGAAGTCTAAAAAGTCCAGAACTTTTCTTGTGTTATAAGAGAGGAAGAGATAAACC
ACCCCTTACAGATATTGGAGTTATATATGAAGGGAAAGAAAGACTTATTCCAGGATGTGAAGTG
ATCCAAGCCACGCCCTATGGTCGCTGTGCCAATGTCAACAATAGTTCAACTACTTCACAAAGAA
TCTTTATCACTTATCGAAGGGCTCCTCTAATTCGACCCCAGAATTCCTTGGCAGTTACTGATAT
CTGTGTCATTGTAACCAGCAAAGGAGAAACCCCTCCTCATACCTTCTGCAAAGTTGACAAAAAC
TTAAATTGTGGAATGTGGGGTTCCAGTGTATTTCTATGTTACAAGAAGTCTGTGCCTGCTTCAA
ATGCAATAGCATATAAAGCTGGTTTAATTTTTAGGTATCCAGAAGATGACTATGAATCCTTTCC
ACTCTCAGAATCTGTACCTCTTTTCTGCCTTCCTATGGGAGCCACTATTGAATGTTGGGATCCT
CAAACCAAATATCCACTTCCAGTTTTTTCAACTTTTGTCCTGACAGGTTCTTCAGCTGAAAAGG
TATATGGAGCTGCCATCCAGTTTTACGAACCATATTCTCGGGAACTTCTAACAGAGAAACAGCT
TATGCAGCTGGGCTTGTTGACGCCTGTGGAGAGAAAAGTGATCTCTAAATCCATCAATTCAAAC
AAATGCATTTGTTTACTCTCACACTGGCCTTTTTTTGATGCTTTTAGAAAGTTTCTTATGTTTA
TCTACAAACTTTCTGTGTCTGGACCACATCCTCTTCCCATTGAAAAGCATATTTCACATTTTAT
GCAAAACATCCCTTTTCCTTCACCGCAAAGACCAAGAATCCTTGTACAGCTGTCAGTCCATGAT
GCATTAATATTATCACAGCCAGTTTCTACACCTTTACCACTAAGTGGAGCCAACTTTAGTACCT
TGCTGATGAATCTGGGTCCTGAGAATTGTGCGACACTACTGCTCTTAGTTTTACTTGAGAGTAA
GATTCTGCTGCATTCTCTTAGGCCAGCTGTATTGACTGGGGTAGCTGAAGCTGTTGTAGCTATG
ATCTTTCCATTTCAGTGGCAATGCCCATATATTCCCCTTTGTCCTCTTTCACTGGCTGGAGTGC
TTAGTGCACCTTTACCATTTATAGTTGGAGTTGACTCAAGGTATTTTGATCTTCATGACCCACC
ACCAGATGTTGTTTGCATTGACTTGGATACGAACATGTTATATGTATCAGATGAAAAGAAGAAC
ATGAACTGGAAACAGCTACCTAAAAAGCCATGCAAAAATCTACTTAGCACTTTAAAGAAACTGT
ATTCCCAGCTATCTACAGTTCACCGGAAAACTCAAGAAGGTTCAGCCATTGAAATGACTCCAAT
TGAAGCAGATTTCTCCTGGCAAAAAAAGATGACACAACTTGAGATGGAAATTCAAGAGGCATTT
TTGCGATTTATGGCATCTGTTTTAAAAGGATATAGAACATATCTCAAACCAATCACAGAGGCTC
CTTCAAATAAAGCCACAGCTGTAGATTCATTGTTTGATCGACAAGGATTTATAAAAAGTCGAGA
TCGGGCCTATACAAAATTCTATACCCTTTTATCCAAAACACAGATCTTTATTCGTTTTATTGAA
GAATGCAGTTTTGTAAGTGATAAAGATACTGGATTGGCATTTTTTGATGACTGCATAGAGAAGT
TGTTTCCTGATAAAGGCACAGAGAAAACAGAAAAGGTTGATTTTGACCTAGCAGAAGATACCAA
ATTAATAGAATTAGATGATTCACAGAAAAGTGAACATACTGTATTAATAATGCCACCTGAGCCA
CCTCCTGATGATGGAAAGGACCTCTCACCAAAGTACAGTTACAAATATTTTCCAAGACTGGACC
TTAAACTTTTTGACAGACCACAGGAGTTGAAACTTTGTTTTAGTAGACACCCTACTGGGAATAG
CATTACAAACAGTCCAGCTCTCATGGCTAAAAGAACTAAACAGGAGATTAAAACAGCTCATAAA
TTGGCAAGGAGATGTTATACAAATCCACCACAGTGGGCCAAGTGTCTGTTCAGTCATTGTTACA
GTTTATGGTTCATTTGTCTCCCAGCCTATGTTAGAGTTTCTCATCCTAAGGTCAGAGCACTTCA
ACAGGCATATGATATACTTATCAAGATGAGAAAAACAGATGTGGATCCACTGGATGAGGTGTGC
TATCGAGTAGTAATGCAGCTTTGTGGACTTTGGGGTCATCCTGTTTTAGCAGTGAGAGTCTTAT
TTGAAATGAAAACTGCTAAGATAAAACCAAATGCCATTACTTATGGTTATTATAATAAGGTAGT
TTTGGAGAGCCCATGGCCTAGCAGTACTCGCAGTGGTATTTTCTTATGGACAAAGGTACGGAAT
GTAGTACGTGGCTTGGCACAATTTAGGCAGCCACTTAAAAAGACCATTCAAAAGTCCCTGGCAT
CCTCAATATCAGTTCCTCAGAATGCCACAGGTGGAAGTGATGGGGACACGGTGAGCCACGGTAG
CGTGGATAGTTCTAATGATGCTAACAATGGGGAGCACACAGTCTTCGTCAGAGATTTAATCAGG
CTTGATTCCATTGATAATCACTCTAGCACAGGTGGTCAGTCTGACCAAGGCTATGGGTCTAAGG
ATGAACTTATAAAGGACGAAGCAGAAATTCACGTGCCTGAAGAACATATAGCACCAGAGTTGGT
AACTAAAATGAACGTGCAAGTAGAAGAGGTGTGTGATGTGTCTGCTATTGTGGTAAAACATTCA
CAACCTAGTCCAGAGTCTCAGAGTCCTAATGAACCTCCTTCATGGGGCAGCAGTATTGTGAAAG
TTTCATCTGGTATATTTGATGTCAACAACAGAAAAAGTAGTACTGGTAGTACATCAAATGTTCT
ATTTTCTACACAAGATCTAGTTGAAGATGCAGTCTTTGGTGAAGTTTCTAATCTCAAGAAGAAT
GGTGATAGAGGAGAAAAAAGACAAAAGCATTTTCCAGAAAGGAGTTGTAGTTTTAGTTCTGAAA
GTCGAGCAGGAATGCTACTTAAGAAAAGCAGTTTGGATTTGAATTCAAATGAAATGGCTATCAT
GATGGGAGCAGATGCCAAGATTCTTACAGCAGCATTGACATGTCCTAAGGCTTCTCCACTTCAT
ATGGCAAGAACTCATAGTTTCGAGAATGTTAGCTGTCACCTAGCTGATACTAGGACCCGTGTCT
CTGAAAGTAGTTGGGATTCTGAGCACAGATCATCTGCTGTCCTAGAGATGCTTGAGGAAAGCCA
AGAGCTCATAGAGCCTGTGGTTGATGATAATATAGCTAAAACTAGTACAACAAAGATGACATAT
GATAGTCAACAACATGATAGTAACAGTAATCAGTCCAGAGACTTGAAAGCAGAATCCAAAGATC
TGATGAATAAGAGAAGTAGTGTATATGGTGTTGCTAAAGCTGTTGAAAGGGAGGATGTTGAAAC
TGGACTAGATCCTTTGTCTCTTTTAGCCACTGAATCTATAGAAGAAAAGCCTCCTGATTCTGAA
GATAAAATGTTTTCTCCAGTTATTGCACGTAATCTGGCTGATGAAATTGAGAGCTACATGAACT
TAAAAAGTCCCCTGGGTAGTAAATCTTCTAGTATGGAATTGCACCGAGAGGAAAGCAGAGAATC
TGGCACTACTACTACATTTATGCACCCTTTAGAGAGAAGATCAAGCCTACCATTAGATAATAGC
CCACCAGCCCAGGAAAATCCTAAAAGTGAGAAGAGTTCTCCTGCAGTGTCCAGGTCTAAAACTT
TTACTGGACGTTTCAAGCAGCACACTCCCTATCGGACTTACAAAGATCGTTCACCTTTATCTGC
ATTGGTTCGTTCTTCACCACATGGCTCATTGGGTTCTGTAGTAAATTCTTTGTCAGGGCTAAAG
CTGGATAATCTACTCTCAGGGCCCAAGATAGATGTCCTAAAATCTGGTATGAAACAAGCAGCAA
CAGTAGCCAGTAAGATGTGGGTGGCTGTAGCATCTGCCTACAACTACTCAGATGACGAGGAGGA
AATTAATAGAGATTACAGCTTCCCAGCTGGCTTGGAAGACCATATTTTGGGGGAAAATGTATCT
CCTAACACAAGTATCTCAGGGTTGGTCCCTAGTGAACTTACCCAAAGCAACACAAGCCTTGGCA
GTAGCAGCAGCAGTGGAGATATTGGAAAACTACATTATTCAACAGGTGAAGTTTCATTTCCAAG
AGGCATAAAAGGGCAGGACTTTGAAAAATCAGACCATGGTTCATCCCAAAATACCAGCATGTCT
AGCATCTATCAGAATTGTGCAATGGAGGTTTTGATGTCAAGTTGTTCACAATGTAGAACTTGTG
GAGCTTTGGTTTATGATGAAGAAATTATGGCTGGATGGACAGCAGATGATTCAAATTTGAATAC
AACATGTCCATTCTGTAAAAGCAACTTCTTGCCTCTTCTCAATATAGAATTTAAAGACTTGAGA
GGCTCTGCAAGGTTAGTATTGTAAAAGCTCCCTCAAGAGCTTTTTCTTGAAACCAAGTACCTCT
G

hide sequence

RefSeq Acc Id:

XM_040285841 ⟹ XP_040141775

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	153,479,598 - 153,581,391 (+)	NCBI

RefSeq Acc Id:

XM_040285842 ⟹ XP_040141776

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	153,479,598 - 153,581,391 (+)	NCBI

RefSeq Acc Id:

XM_040285843 ⟹ XP_040141777

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024404947	153,479,598 - 153,581,391 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_013218643	(Get FASTA)	NCBI Sequence Viewer
	XP_021589360	(Get FASTA)	NCBI Sequence Viewer
	XP_021589361	(Get FASTA)	NCBI Sequence Viewer
	XP_040141775	(Get FASTA)	NCBI Sequence Viewer
	XP_040141776	(Get FASTA)	NCBI Sequence Viewer
	XP_040141777	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000016845.2
	ENSSTOP00000019519.2
	ENSSTOP00000026415.1
	ENSSTOP00000027024.1

RefSeq Acc Id:	XP_013218643 ⟸ XM_013363189
- Peptide Label:	isoform X1
- UniProtKB:	I3N573 (UniProtKB/TrEMBL), A0A287CYK0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIEDKGPRVTDYFVVAGLTDTSTLLDQEINRLDTKSTGPKAPITDIAIIIKSAGETVPEGYTCV EATPSALQANLNYGSLKSPELFLCYKRGRDKPPLTDIGVIYEGKERLIPGCEVIQATPYGRCAN VNNSSTTSQRIFITYRRAPLIRPQNSLAVTDICVIVTSKGETPPHTFCKVDKNLNCGMWGSSVF LCYKKSVPASNAIAYKAGLIFRYPEDDYESFPLSESVPLFCLPMGATIECWDPQTKYPLPVFST FVLTGSSAEKVYGAAIQFYEPYSRELLTEKQLMQLGLLTPVERKVISKSINSNKCICLLSHWPF FDAFRKFLMFIYKLSVSGPHPLPIEKHISHFMQNIPFPSPQRPRILVQLSVHDALILSQPVSTP LPLSGANFSTLLMNLGPENCATLLLLVLLESKILLHSLRPAVLTGVAEAVVAMIFPFQWQCPYI PLCPLSLAGVLSAPLPFIVGVDSRYFDLHDPPPDVVCIDLDTNMLYVSDEKKNMNWKQLPKKPC KNLLSTLKKLYSQLSTVHRKTQEGSAIEMTPIEADFSWQKKMTQLEMEIQEAFLRFMASVLKGY RTYLKPITEAPSNKATAVDSLFDRQGFIKSRDRAYTKFYTLLSKTQIFIRFIEECSFVSDKDTG LAFFDDCIEKLFPDKGTEKTEKVDFDLAEDTKLIELDDSQKSEHTVLIMPPEPPPDDGKDLSPK YSYKYFPRLDLKLFDRPQELKLCFSRHPTGNSITNSPALMAKRTKQEIKTAHKLARRCYTNPPQ WAKCLFSHCYSLWFICLPAYVRVSHPKVRALQQAYDILIKMRKTDVDPLDEVCYRVVMQLCGLW GHPVLAVRVLFEMKTAKIKPNAITYGYYNKVVLESPWPSSTRSGIFLWTKVRNVVRGLAQFRQP LKKTIQKSLASSISVPQNATGGSDGDTVSHGSVDSSNDANNGEHTVFVRDLIRLDSIDNHSSTG GQSDQGYGSKDELIKDEAEIHVPEEHIAPELVTKMNVQVEEVCDVSAIVVKHSQPSPESQSPNE PPSWGSSIVKVSSGIFDVNNRKSSTGSTSNVLFSTQDLVEDAVFGEVSNLKKNGDRGEKRQKHF PERSCSFSSESRAGMLLKKSSLDLNSNEMAIMMGADAKILTAALTCPKASPLHMARTHSFENVS CHLADTRTRVSESSWDSEHRSSAVLEMLEESQELIEPVVDDNIAKTSTTKMTYDSQQHDSNSNQ SRDLKAESKDLMNKRSSVYGVAKAVEREDVETGLDPLSLLATESIEEKPPDSEDKMFSPVIARN LADEIESYMNLKSPLGSKSSSMELHREESRESGTTTTFMHPLERRSSLPLDNSPPAQENPKSEK SSPAVSRSKTFTGRFKQHTPYRTYKDRSPLSALVRSSPHGSLGSVVNSLSGLKLDNLLSGPKID VLKSGMKQAATVASKMWVAVASAYNYSDDEEEINRDYSFPAGLEDHILGENVSPNTSISGLVPS ELTQSNTSLGSSSSSGDIGKLHYSTGEVSFPRGIKGQDFEKSDHGSSQNTSMSSIYQNCAMEVL MSSCSQCRTCGALVYDEEIMAGWTADDSNLNTTCPFCKSNFLPLLNIEFKDLRGSASFFLKPST SGDSLQSGSLPLASEPLEHRPVCSSAEPELINFMDFPKPKQTITEETSYAVESSDEIKKISGDV QTVQVPSVPNSLSKRNVPLTRSHSVGGPLQNIDFSQRPFHGISTVSLPNSLQEVVDPLGKRPNP PPVSVPYLSPLVLRKELESLLENEGDQVIHTSSFINQHPIIFWNLVWYFRRLDLPSNLPGLILT SEHCNEGIQLPLSSLSQDSKLVYIQLLWDNINLHQEPGEPLYVSWRNFNSEKKLSLLSEEQQAT STLVETIRQSIQHNDVLKPINLLSEQMKPEMKRQRSLYREILFLSLVSLGRENIDIEAFDNEYG LAYNSLPSEVLEKLQKIDAPPSVSVEWCRKCFGAPLI hide sequence

RefSeq Acc Id:	XP_021589361 ⟸ XM_021733686
- Peptide Label:	isoform X4
- UniProtKB:	A0A287CYK0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MIEDKGPRVTDYFVVAGLTDTSTLLDQEINRLDTKSTGPKAPITDIAIIIKSAGETVPEGYTCV EATPSALQANLNYGSLKSPELFLCYKRGRDKPPLTDIGVIYEGKERLIPGCEVIQATPYGRCAN VNNSSTTSQRIFITYRRAPLIRPQNSLAVTDICVIVTSKGETPPHTFCKVDKNLNCGMWGSSVF LCYKKSVPASNAIAYKAGLIFRYPEDDYESFPLSESVPLFCLPMGATIECWDPQTKYPLPVFST FVLTGSSAEKVYGAAIQFYEPYSRELLTEKQLMQLGLLTPVERKVISKSINSNKCICLLSHWPF FDAFRKFLMFIYKLSVSGPHPLPIEKHISHFMQNIPFPSPQRPRILVQLSVHDALILSQPVSTP LPLSGANFSTLLMNLGPENCATLLLLVLLESKILLHSLRPAVLTGVAEAVVAMIFPFQWQCPYI PLCPLSLAGVLSAPLPFIVGVDSRYFDLHDPPPDVVCIDLDTNMLYVSDEKKNMNWKQLPKKPC KNLLSTLKKLYSQLSTVHRKTQEGSAIEMTPIEADFSWQKKMTQLEMEIQEAFLRFMASVLKGY RTYLKPITEAPSNKATAVDSLFDRQGFIKSRDRAYTKFYTLLSKTQIFIRFIEECSFVSDKDTG LAFFDDCIEKLFPDKGTEKTEKVDFDLAEDTKLIELDDSQKSEHTVLIMPPEPPPDDGKDLSPK YSYKYFPRLDLKLFDRPQELKLCFSRHPTGNSITNSPALMAKRTKQEIKTAHKLARRCYTNPPQ WAKCLFSHCYSLWFICLPAYVRVSHPKVRALQQAYDILIKMRKTDVDPLDEVCYRVVMQLCGLW GHPVLAVRVLFEMKTAKIKPNAITYGYYNKVVLESPWPSSTRSGIFLWTKVRNVVRGLAQFRQP LKKTIQKSLASSISVPQNATGGSDGDTVSHGSVDSSNDANNGEHTVFVRDLIRLDSIDNHSSTG GQSDQGYGSKDELIKDEAEIHVPEEHIAPELVTKMNVQVEEVCDVSAIVVKHSQPSPESQSPNE PPSWGSSIVKVSSGIFDVNNRKSSTGSTSNVLFSTQDLVEDAVFGEVSNLKKNGDRGEKRQKHF PERSCSFSSESRAGMLLKKSSLDLNSNEMAIMMGADAKILTAALTCPKASPLHMARTHSFENVS CHLADTRTRVSESSWDSEHRSSAVLEMLEESQELIEPVVDDNIAKTSTTKMTYDSQQHDSNSNQ SRDLKAESKDLMNKRSSVYGVAKAVEREDVETGLDPLSLLATESIEEKPPDSEDKMFSPVIARN LADEIESYMNLKSPLGSKSSSMELHREESRESGTTTTFMHPLERRSSLPLDNSPPAQENPKSEK SSPAVSRSKTFTGRFKQHTPYRTYKDRSPLSALVRSSPHGSLGSVVNSLSGLKLDNLLSGPKID VLKSGMKQAATVASKMWVAVASAYNYSDDEEEINRDYSFPAGLEDHILGENVSPNTSISGLVPS ELTQSNTSLGSSSSSGDIGKLHYSTGEVSFPRGIKGQDFEKSDHGSSQNTSMSSIYQNCAMEVL MSSCSQCRTCGALVYDEEIMAGWTADDSNLNTTCPFCKSNFLPLLNIEFKDLRGSARLVL hide sequence

RefSeq Acc Id:	XP_021589360 ⟸ XM_021733685
- Peptide Label:	isoform X3
- UniProtKB:	A0A287CYK0 (UniProtKB/TrEMBL)
- Sequence:	show sequence MGATIECWDPQTKYPLPVFSTFVLTGSSAEKVYGAAIQFYEPYSRELLTEKQLMQLGLLTPVER KVISKSINSNKCICLLSHWPFFDAFRKFLMFIYKLSVSGPHPLPIEKHISHFMQNIPFPSPQRP RILVQLSVHDALILSQPVSTPLPLSGANFSTLLMNLGPENCATLLLLVLLESKILLHSLRPAVL TGVAEAVVAMIFPFQWQCPYIPLCPLSLAGVLSAPLPFIVGVDSRYFDLHDPPPDVVCIDLDTN MLYVSDEKKNMNWKQLPKKPCKNLLSTLKKLYSQLSTVHRKTQEGSAIEMTPIEADFSWQKKMT QLEMEIQEAFLRFMASVLKGYRTYLKPITEAPSNKATAVDSLFDRQGFIKSRDRAYTKFYTLLS KTQIFIRFIEECSFVSDKDTGLAFFDDCIEKLFPDKGTEKTEKVDFDLAEDTKLIELDDSQKSE HTVLIMPPEPPPDDGKDLSPKYSYKYFPRLDLKLFDRPQELKLCFSRHPTGNSITNSPALMAKR TKQEIKTAHKLARRCYTNPPQWAKCLFSHCYSLWFICLPAYVRVSHPKVRALQQAYDILIKMRK TDVDPLDEVCYRVVMQLCGLWGHPVLAVRVLFEMKTAKIKPNAITYGYYNKVVLESPWPSSTRS GIFLWTKVRNVVRGLAQFRQPLKKTIQKSLASSISVPQNATGGSDGDTVSHGSVDSSNDANNGE HTVFVRDLIRLDSIDNHSSTGGQSDQGYGSKDELIKDEAEIHVPEEHIAPELVTKMNVQVEEVC DVSAIVVKHSQPSPESQSPNEPPSWGSSIVKVSSGIFDVNNRKSSTGSTSNVLFSTQDLVEDAV FGEVSNLKKNGDRGEKRQKHFPERSCSFSSESRAGMLLKKSSLDLNSNEMAIMMGADAKILTAA LTCPKASPLHMARTHSFENVSCHLADTRTRVSESSWDSEHRSSAVLEMLEESQELIEPVVDDNI AKTSTTKMTYDSQQHDSNSNQSRDLKAESKDLMNKRSSVYGVAKAVEREDVETGLDPLSLLATE SIEEKPPDSEDKMFSPVIARNLADEIESYMNLKSPLGSKSSSMELHREESRESGTTTTFMHPLE RRSSLPLDNSPPAQENPKSEKSSPAVSRSKTFTGRFKQHTPYRTYKDRSPLSALVRSSPHGSLG SVVNSLSGLKLDNLLSGPKIDVLKSGMKQAATVASKMWVAVASAYNYSDDEEEINRDYSFPAGL EDHILGENVSPNTSISGLVPSELTQSNTSLGSSSSSGDIGKLHYSTGEVSFPRGIKGQDFEKSD HGSSQNTSMSSIYQNCAMEVLMSSCSQCRTCGALVYDEEIMAGWTADDSNLNTTCPFCKSNFLP LLNIEFKDLRGSASFFLKPSTSGDSLQSGSLPLASEPLEHRPVCSSAEPELINFMDFPKPKQTI TEETSYAVESSDEIKKISGDVQTVQVPSVPNSLSKRNVPLTRSHSVGGPLQNIDFSQRPFHGIS TVSLPNSLQEVVDPLGKRPNPPPVSVPYLSPLVLRKELESLLENEGDQVIHTSSFINQHPIIFW NLVWYFRRLDLPSNLPGLILTSEHCNEGIQLPLSSLSQDSKLVYIQLLWDNINLHQEPGEPLYV SWRNFNSEKKLSLLSEEQQATSTLVETIRQSIQHNDVLKPINLLSEQMKPEMKRQRSLYREILF LSLVSLGRENIDIEAFDNEYGLAYNSLPSEVLEKLQKIDAPPSVSVEWCRKCFGAPLI hide sequence

RefSeq Acc Id:	XP_040141775 ⟸ XM_040285841
- Peptide Label:	isoform X1
- UniProtKB:	I3N573 (UniProtKB/TrEMBL), A0A287CYK0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040141776 ⟸ XM_040285842
- Peptide Label:	isoform X2
- UniProtKB:	I3MXK0 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_040141777 ⟸ XM_040285843
- Peptide Label:	isoform X5

Ensembl Acc Id:

ENSSTOP00000016845 ⟸ ENSSTOT00000028664

Ensembl Acc Id:

ENSSTOP00000019519 ⟸ ENSSTOT00000025867

Ensembl Acc Id:

ENSSTOP00000026415 ⟸ ENSSTOT00000042816

Ensembl Acc Id:

ENSSTOP00000027024 ⟸ ENSSTOT00000038260

Protein Domains

MABP uDENN

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000025059	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000025867.2	UniProtKB/TrEMBL
	ENSSTOT00000028664.2	UniProtKB/TrEMBL
	ENSSTOT00000038260.1	UniProtKB/TrEMBL
	ENSSTOT00000042816.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.10	UniProtKB/TrEMBL
	2.100.10.50	UniProtKB/TrEMBL
	3.40.50.11500	UniProtKB/TrEMBL
InterPro	cDENN_dom	UniProtKB/TrEMBL
	dDENN_dom	UniProtKB/TrEMBL
	DENN_C	UniProtKB/TrEMBL
	DENN_Domain_GEFs	UniProtKB/TrEMBL
	MABP	UniProtKB/TrEMBL
	TPR-like_helical_dom_sf	UniProtKB/TrEMBL
	Tripartite_DENN	UniProtKB/TrEMBL
	uDENN_dom	UniProtKB/TrEMBL
NCBI Gene	Dennd4c	ENTREZGENE
PANTHER	DENN DOMAIN-CONTAINING PROTEIN 4	UniProtKB/TrEMBL
	DENN DOMAIN-CONTAINING PROTEIN 4C	UniProtKB/TrEMBL
Pfam	dDENN	UniProtKB/TrEMBL
	DENN	UniProtKB/TrEMBL
	uDENN	UniProtKB/TrEMBL
PROSITE	DENN	UniProtKB/TrEMBL
	MABP	UniProtKB/TrEMBL
SMART	dDENN	UniProtKB/TrEMBL
	DENN	UniProtKB/TrEMBL
	uDENN	UniProtKB/TrEMBL
UniProt	A0A287CYK0	ENTREZGENE, UniProtKB/TrEMBL
	A0A287D0G6_ICTTR	UniProtKB/TrEMBL
	I3MXK0	ENTREZGENE, UniProtKB/TrEMBL
	I3N573	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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