LOC101960098 (aminoacylase-1) - Rat Genome Database

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Gene: LOC101960098 (aminoacylase-1) Ictidomys tridecemlineatus
Analyze
Symbol: LOC101960098 (Ensembl: ACY1)
Name: aminoacylase-1 (Ensembl:aminoacylase 1)
RGD ID: 12502606
Description: ENCODES a protein that exhibits aminoacylase activity (ortholog); INVOLVED IN amino acid metabolic process (inferred); ASSOCIATED WITH Aminoacylase 1 Deficiency (ortholog); genetic disease (ortholog); intellectual disability (ortholog); FOUND IN cytoplasm (inferred); extracellular exosome (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: Acy1; aminoacylase 1; aminoacylase-1, transcript variant X1; aminoacylase-1, transcript variant X2
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560266,552,867 - 66,573,380 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365293,327,879 - 3,333,879 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365293,308,863 - 3,333,877 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
LOC101960098
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560266,552,867 - 66,573,380 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365293,327,879 - 3,333,879 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365293,308,863 - 3,333,877 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ACY1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38351,983,535 - 51,989,197 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl351,983,340 - 51,989,197 (+)EnsemblGRCh38hg38GRCh38
GRCh37352,017,551 - 52,023,213 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36351,992,603 - 51,998,258 (+)NCBINCBI36Build 36hg18NCBI36
Build 34351,992,602 - 51,998,258NCBI
Celera351,996,840 - 52,002,495 (+)NCBICelera
Cytogenetic Map3p21.2NCBI
HuRef352,080,641 - 52,086,559 (+)NCBIHuRef
CHM1_1351,969,905 - 51,975,823 (+)NCBICHM1_1
T2T-CHM13v2.0352,016,455 - 52,022,117 (+)NCBIT2T-CHM13v2.0
Acy1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm399106,310,180 - 106,315,594 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl9106,310,180 - 106,315,518 (-)EnsemblGRCm39 Ensembl
GRCm389106,432,981 - 106,438,236 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl9106,432,981 - 106,438,319 (-)EnsemblGRCm38mm10GRCm38
MGSCv379106,335,327 - 106,340,567 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv369107,224,755 - 107,230,012 (-)NCBIMGSCv36mm8
MGSCv369106,291,097 - 106,296,337 (-)NCBIMGSCv36mm8
Celera9106,060,386 - 106,065,605 (-)NCBICelera
Cytogenetic Map9F1NCBI
cM Map957.49NCBI
Acy1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88115,951,068 - 115,956,471 (-)NCBIGRCr8
mRatBN7.28107,072,354 - 107,077,756 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8107,072,358 - 107,077,682 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8112,695,324 - 112,700,661 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08110,894,500 - 110,899,837 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08108,737,280 - 108,742,617 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08115,134,792 - 115,140,171 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8115,134,765 - 115,140,080 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08114,498,889 - 114,504,255 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48111,576,888 - 111,581,571 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18111,596,342 - 111,601,026 (-)NCBI
Celera8106,384,300 - 106,388,983 (-)NCBICelera
Cytogenetic Map8q32NCBI
Acy1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049555323,627,274 - 3,631,799 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049555323,627,314 - 3,631,799 (+)NCBIChiLan1.0ChiLan1.0
ACY1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2251,977,814 - 51,983,602 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1351,982,730 - 51,988,372 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0351,924,889 - 51,930,638 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1353,153,166 - 53,158,941 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl353,144,802 - 53,158,941 (+)Ensemblpanpan1.1panPan2
ACY1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12037,732,231 - 37,736,986 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2037,713,721 - 37,726,005 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02038,082,813 - 38,095,105 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2037,942,559 - 38,095,121 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12037,446,429 - 37,458,720 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02037,855,192 - 37,867,484 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02038,140,053 - 38,152,347 (-)NCBIUU_Cfam_GSD_1.0
ACY1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12213,353,446 - 13,359,274 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2213,353,588 - 13,359,569 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666041153,547,149 - 153,552,999 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSSTOT00000002601   ⟹   ENSSTOP00000002326
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
SpeTri2.0 EnsemblNW_0049365293,327,879 - 3,333,879 (+)Ensembl
RefSeq Acc Id: XM_013359429   ⟹   XP_013214883
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560266,567,236 - 66,573,380 (+)NCBI
SpeTri2.0NW_0049365293,327,782 - 3,333,877 (+)NCBI
Sequence:
RefSeq Acc Id: XM_021727529   ⟹   XP_021583204
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_02440560266,552,867 - 66,573,380 (+)NCBI
SpeTri2.0NW_0049365293,308,863 - 3,333,877 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_013214883 (Get FASTA)   NCBI Sequence Viewer  
  XP_021583204 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSSTOP00000002326.2
GenBank Protein KAG3270599 (Get FASTA)   NCBI Sequence Viewer  
  KAG3270600 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_013214883   ⟸   XM_013359429
- UniProtKB: I3M0R1 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_021583204   ⟸   XM_021727529
- UniProtKB: I3M0R1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSSTOP00000002326   ⟸   ENSSTOT00000002601
Protein Domains
Peptidase M20 dimerisation


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSSTOG00000002597 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSSTOT00000002601.3 UniProtKB/TrEMBL
Gene3D-CATH 1.10.150.900 UniProtKB/TrEMBL
  3.30.70.360 UniProtKB/TrEMBL
  Zn peptidases UniProtKB/TrEMBL
InterPro Aminoacylase-1_M20A UniProtKB/TrEMBL
  ArgE/DapE_CS UniProtKB/TrEMBL
  Bact_exopeptidase_dim_dom UniProtKB/TrEMBL
  N-acyl_aa_amidohydrolase UniProtKB/TrEMBL
  Peptidase_M20 UniProtKB/TrEMBL
  Peptidase_M20_dimer UniProtKB/TrEMBL
NCBI Gene Acy1 ENTREZGENE
PANTHER AMINOACYLASE-1 UniProtKB/TrEMBL
  AMINOACYLASE-1 UniProtKB/TrEMBL
Pfam M20_dimer UniProtKB/TrEMBL
  Peptidase_M20 UniProtKB/TrEMBL
PIRSF ACY-1 UniProtKB/TrEMBL
PROSITE ARGE_DAPE_CPG2_1 UniProtKB/TrEMBL
  ARGE_DAPE_CPG2_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF55031 UniProtKB/TrEMBL
  Zn-dependent exopeptidases UniProtKB/TrEMBL
UniProt I3M0R1 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-07-13 LOC101960098  aminoacylase-1  Acy1  aminoacylase 1  Symbol and/or name change 5135510 APPROVED