Advanced Search (OLGA)

Gene: Slc16a12 (solute carrier family 16 member 12) Ictidomys tridecemlineatus

Subscribe to Updates

Analyze

Symbol:

Slc16a12

Name:

solute carrier family 16 member 12

RGD ID:

12478706

Description:

ENCODES a protein that exhibits creatine transmembrane transporter activity (inferred); transmembrane transporter activity (inferred); uniporter activity (inferred); INVOLVED IN creatinine metabolic process (ortholog); ASSOCIATED WITH autoimmune lymphoproliferative syndrome (ortholog); cataract (ortholog); cataract 47 (ortholog); FOUND IN basolateral plasma membrane (inferred); membrane (inferred); plasma membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

monocarboxylate transporter 12; solute carrier family 16 member 12, transcript variant X1; solute carrier family 16 member 12, transcript variant X2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	43,114,853 - 43,133,513 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936601	4,747,489 - 4,763,697 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936601	4,685,215 - 4,766,116 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc16a12	Squirrel	autoimmune lymphoproliferative syndrome		ISO	SLC16A12 (Homo sapiens)	8554872	ClinVar Annotator: match by term: AUTOIMMUNE LYMPHOPROLIFERATIVE SYNDROME more ...	ClinVar	PMID:28492532
Slc16a12	Squirrel	cataract		ISO	SLC16A12 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Congenital cataract	ClinVar	PMID:25741868 and PMID:26694549
Slc16a12	Squirrel	cataract 47		ISO	SLC16A12 (Homo sapiens)	8554872	ClinVar more ...	ClinVar	PMID:17458810 more ...
Slc16a12	Squirrel	coloboma		ISO	SLC16A12 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Coloboma of eye	ClinVar	PMID:24281366 more ...
Slc16a12	Squirrel	Wolman disease		ISO	SLC16A12 (Homo sapiens)	8554872	ClinVar Annotator: match by term: Wolman disease	ClinVar	PMID:28492532

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc16a12	Squirrel	cataract 47		ISO	SLC16A12 (Homo sapiens)	7240710		OMIM

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc16a12	Squirrel	creatine transmembrane transport	involved_in	IEA	UniProtKB:Q6ZSM3 and ensembl:ENSP00000360855	150520179		Ensembl	GO_REF:0000107
Slc16a12	Squirrel	creatine transmembrane transport	involved_in	IEA	PANTHER:PTN000144725	150520179		TreeGrafter	GO_REF:0000118
Slc16a12	Squirrel	creatinine metabolic process	involved_in	ISO	Slc16a12 (Rattus norvegicus)	9068941	PMID:34075817	UniProt	PMID:34075817 and REF_RGD_ID:153298943
Slc16a12	Squirrel	transmembrane transport	involved_in	IEA	InterPro:IPR011701	150520179		InterPro	GO_REF:0000002

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc16a12	Squirrel	basolateral plasma membrane	located_in	IEA	UniProtKB:Q8BGC3 and ensembl:ENSMUSP00000009522	150520179		Ensembl	GO_REF:0000107
Slc16a12	Squirrel	basolateral plasma membrane	located_in	IEA	UniProtKB-SubCell:SL-0026	150520179		UniProt	GO_REF:0000044
Slc16a12	Squirrel	membrane	located_in	IEA	UniProtKB-KW:KW-0472	150520179		UniProt	GO_REF:0000043
Slc16a12	Squirrel	plasma membrane	located_in	IEA	UniProtKB:Q6ZSM3 and ensembl:ENSP00000360855	150520179		Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
Slc16a12	Squirrel	creatine transmembrane transporter activity	enables	IEA	UniProtKB:Q6ZSM3 and ensembl:ENSP00000360855	150520179		Ensembl	GO_REF:0000107
Slc16a12	Squirrel	protein binding	enables	ISO	UniProtKB:P11912 more ...	9068941	PMID:32296183	IntAct	PMID:32296183
Slc16a12	Squirrel	transmembrane transporter activity	enables	IEA	InterPro:IPR011701 and InterPro:IPR020846	150520179		InterPro	GO_REF:0000002
Slc16a12	Squirrel	uniporter activity	enables	IEA	UniProtKB:Q6ZSM3 and ensembl:ENSP00000360855	150520179		Ensembl	GO_REF:0000107

PMID:22301074	PMID:30032202

Slc16a12
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	43,114,853 - 43,133,513 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936601	4,747,489 - 4,763,697 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936601	4,685,215 - 4,766,116 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SLC16A12
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	89,430,299 - 89,556,704 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	89,430,299 - 89,556,641 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	91,190,056 - 91,295,351 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	91,180,036 - 91,285,293 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	10	84,936,860 - 85,042,126 (-)	NCBI		Celera
Cytogenetic Map	10	q23.31	NCBI
HuRef	10	84,824,228 - 84,929,593 (-)	NCBI		HuRef
CHM1_1	10	91,472,067 - 91,577,412 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	90,314,133 - 90,419,429 (-)	NCBI		T2T-CHM13v2.0

Slc16a12
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	34,645,801 - 34,725,223 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	34,645,803 - 34,724,689 (-)	Ensembl		GRCm39 Ensembl
GRCm38	19	34,668,401 - 34,747,493 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	34,668,403 - 34,747,289 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	34,742,896 - 34,821,601 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	34,734,403 - 34,813,108 (-)	NCBI		MGSCv36	mm8
Celera	19	35,442,689 - 35,521,028 (-)	NCBI		Celera
Cytogenetic Map	19	C1	NCBI
cM Map	19	29.79	NCBI

Slc16a12
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	241,597,165 - 241,674,821 (-)	NCBI		GRCr8
mRatBN7.2	1	232,184,004 - 232,262,170 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	232,185,907 - 232,262,141 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	240,579,603 - 240,608,453 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	247,498,691 - 247,521,337 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	240,336,893 - 240,359,535 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	252,976,071 - 253,054,500 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	252,976,644 - 253,000,760 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	260,197,556 - 260,275,962 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	238,643,040 - 238,665,699 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	238,807,343 - 238,830,600 (-)	NCBI
Celera	1	229,298,962 - 229,321,612 (-)	NCBI		Celera
Cytogenetic Map	1	q53	NCBI

Slc16a12
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955425	3,509,142 - 3,560,138 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955425	3,474,814 - 3,560,138 (+)	NCBI	ChiLan1.0	ChiLan1.0

SLC16A12
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	101,446,803 - 101,481,472 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	101,452,146 - 101,486,786 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	86,155,527 - 86,187,917 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	89,696,148 - 89,727,585 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	89,696,148 - 89,727,585 (-)	Ensembl	panpan1.1		panPan2

SLC16A12
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	4,343,773 - 4,430,653 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	4,345,546 - 4,421,234 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	4,579,217 - 4,664,998 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	4,565,289 - 4,652,174 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	4,567,687 - 4,651,465 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	4,323,134 - 4,402,863 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	4,365,926 - 4,445,342 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	4,501,245 - 4,580,912 (-)	NCBI		UU_Cfam_GSD_1.0

SLC16A12
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	101,273,996 - 101,368,132 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	101,273,977 - 101,368,350 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	110,262,470 - 110,354,305 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SLC16A12
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	82,817,476 - 82,917,004 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	82,818,994 - 82,916,837 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	43,493,620 - 43,592,283 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Slc16a12
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624737	312,039 - 365,915 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624737	312,039 - 405,432 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.


RefSeq Transcripts	XM_005333745	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_021731955	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_040272176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010002273	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000009605 ⟹ ENSSTOP00000008616

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936601	4,747,489 - 4,763,697 (+)	Ensembl

RefSeq Acc Id:

XM_005333745 ⟹ XP_005333802

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024407213	43,114,853 - 43,133,513 (+)	NCBI
SpeTri2.0	NW_004936601	4,747,448 - 4,766,116 (+)	NCBI

Sequence:

show sequence

TGTTGGAATAACTTAGAAAAGAAGAAAAAGGAATTGGAACTATGGCAAAAGTAAATAGACCTGGGTCTACCTCCCCTCCAGATGGAGGATGGGGCTGGATGATCGTGGCTGGCTGTTTCCTTGTTACC
ATCTGCACCCGGGCACTTTTCAGATGTATCTCAATTTTTTTTGTGGAGTTCCAGACATATTTTGCTCAGGATTATGCACAAACAGCATGGATCCATTCCATTGTAGACTGTGTGACTATGCTTTGTGC
TCCACTTGGGAGTGCTGTCAGTAACCACTTATCCTGTCAAGTGGGAATCATGCTGGGTGGCTTGCTTGCATCTACTGGTTTCATCCTGGGCTCATTTGCCACCAGCCTGAAGCATCTCTACCTCACTC
TGGGAGTTCTTACAGGTCTTGGATTTGCACTTTGTTACTCTCCTGCGATTGCCATGGTTGGCAAGTATTTCAGCAGACGGAAAGCCCTTGCTTATGGGATCGCCATGTCAGGGAGTGGCATTGGCACC
TTTGTCCTGGCTCCTGTGGTTCAGCTCCTTATTGAACAGTTTTCCTGGAGGGGAGCACTTCTCATTCTCGGGGGCTTCGTTTTGAATCTCTGTGTTTGTGGTGCCTTGATGCGGCCAATTACTCTTAA
AGAGGACCGTTCAAGTCCAGAGCAGAAATGTGATTGTCGAACTCAGAAAGAAGACTGTAAGCGGGCAGCTCCTTATTCACCTTTGACCAAAGAATGGGCGCAGACCTGCCTGTGTTGCTCTTTGCAGC
AGGAATACAGTTTTTTGCTGATGCCAGACTTTGTTGTGTTAGCCGTCTCTGTTCTGTTTATGGCTTACGGCTGCAGCCCTCTCTTTGTGTACTTGGTGCCTTATGCTTTGAGTGTCGGAGTGAGTCAC
CAGCAAGCTGCTTTTCTTATGTCCATACTTGGGGTGATTGACATTATTGGCAATATCACATTTGGATGGCTAACCGACAGAAGGTGTCTGAAGAATTACCGGTATGTTTGCTACCTCTTTGCTGTGGG
CCTAGATGGGCTCTGCTATCTCTGCCTTCCAATGCTTCGAAGTCTCCCCCTCCTGGTGCCTTTCTCTTGTACCTTTGGCTATTTTGATGGAGCCTACGTGACCTTGATCCCAGTAGTGACTGCTGAAA
TAGTAGGGACCACCTCTTTGTCATCAGCGCTGGGTGTGGTGTACTTCCTTCATGCAGTGCCCTATTTGGTGAGCCCACCCATTGCAGGATGGCTGGTGGATACAACTGGCAGCTACACTGCAGCGTTC
CTTCTCTGTGGATTTTCAATGATCTTTAGTTCTGTGTTGCTTGGCTTTGCTAGACTTGTAAAGAGGATGAAAAGAACCCAGCTGCCATTCCTTGCCAAAGAATCTGATCCCAAGCTGCAGCTTTGGAC
CAATGGATCAGTGGCTTATTCTGTAGCAAGAGAATTAGATCAGAAAGATGGGGCTTCTGTGGCTACAGCAGCTCCTGGTTACAACCTCACATGACCAATGGCCTTCAGCCTGGGAATCTTTGGGGCTG
ATGGAAGAAAGGCCACCAGACTGGCATATTTCTGAAGCATTTTATTTTGGCAGAAGTATTGTCTTCTAGGGAAATCATTATTATTGTTTTGTTAACATATTTATAAGGGAAAATAGAAAAAAATAAAG
AAAGCTGGACTAGCCTAGAGTTTCTTCATTTGTAATTTGGACTTGTAATACTGCTCTATGGGGAATGGAAGGAGTTGATAGTGTTGGCTGTGATTAAGGGTAGTTCCAAGGCATAGCCAAAGCAAGTG
ACCTGGCAGCAGCACTGTAATCCCCAACACTCTGCTCCCATCTCCGCCCCCTTCATCCCCCCTCAGAAGGCAAACAGAAACACTGACGCGTGGGATTGCTTACCCTATGCAGTTTGCAGAAGTGTGTG
GGGGGGTCATCTTGGGTGTGCTGGCAGAGTGTGAAAATGCCAATCCTTTTTCAAGGTGGAGTTCCTCATTAGGGTTTTAAACAGGGTGGTTAAAGCATACTTGAGATTCTTGCAAAGGTAATGATTAA
TATAAAAAGAGACCCCCCATACCCCTTTCTTAGTCTTCCAGCTAGCCCTTGCTTCTGCCAATGGGTAGATATCACTTTGAGAATCCATGAAATGCCATGGTTGGAATGGCATCTTAAAGGGTAGCTGG
TAAGATCTGTTTGAAATTGCTTGAAATGGAAAGCTCCTTTCCTAAGACTGTCCCAGGCACACACCTCTGTTACTATCACATACTAACTGTAAATTCAGGAGGACCTGTCAAGTTACAAGGGCAGCCTT
TCTATCTTTTCTAAAATATTAACTATGCCAAAACTCCCCACTTTTTTTCTTCAGAGTGAGGGGAAAAAAAAAAAAACAACGCTCATTTAAACTGCAGACACATTTCTGCTAGGGACAGAAAAATGTTG
GCAGTATTCCAACTGAGCAGGAATTGAATTCTTGAATCAGCAGGTCTCTGGTGAGCATTTTCTTTGCAGATCAGACATTAGATTCATCATTACCCAGAAGAGTACTTGGGGGATTTGAACTGAAAAAT
ATTACCCTAGAGATATTCTGAAGGTGAGATCCTGTGTTCTTGGTGCAACGCCTAGTGCCTTTCATCTCTTTATGGATAATAACTAGAAACCTAACCCACTGGATTATACTAGTTTATTCATCCCCCAG
ATACCCCACTTTCCTGTGTTTTGGGATCATTTCTGAGTTTTCAGATCCAAGAGGAAGGTTTTGGATACAGAAGAGAAAGGCCAGGTCCCCCAGTTTATCTCTAGCTGTTTGAAATTCAGAGTTGTAAT
CTCAAGTCCCAAGTCATGTCAGATCTATAAACACAGATGAGTTGTATAATTACAACGGGGGTGGGGGGTGTGAGGTTAATTATTAAAGAATTTAAAATCCAAACTTCAAAAAAATATTTTGACGCCAA
AGACCATTTAGCCCACTACCCCTCAAGAGGCCTCTCCAATGACCTGCCAGGGTTACAGGAATTAAAACAAAGAAAGGGGGAAGATTTGAAGTTGGCTGAAGAGTCCTTGCTTGGAACTGGATTATTTC
ACAAAATTAATTGTTAGTTTATTGCCTGCAGAATGAGATACTGGCTTGATTTAATATTTCATAATTGTTTTCCAAAAAGAAATATGAATGTTGTCTGTTATCTCTTTCCACAGTTTGAGAATTGAGTT
TTTGAATCCATGGAATTTGTCATTTGAAAATTTTAAAAATATTTTGAAAAAAATCTGTAAAAAAAAAAATCAAAGTTAAAATGAAGTTATATATGTTTGGAATAGCACTTTACCTTAAATATCATTTC
TTAAATCTTTAAGCCAAATATTTTTAAAAATTTAAGTAGCTATAAATACTCATACATATTTTTTCATAGTGATCACAGTAAAGTTTTTGTTTATGTGCTTCTATAATATAATTTCTCTAAAGTATTTA
TGAAAAATGAGCATAATGAGAGGTTTTAAAGATTTGTATAAAATGATTTGGGATATTGTGACTTTGTACATGCATAAAATTTGCATTTTACTTTCTGTCCTGGAGCAGAATTTTCAGAAAGCCAGTCA
GAAAAATGTAGATCCACAATATTGCCATCTGCTCAGAATTTTACTGTTAATGTTCCATATATTTATATGGTTTATTTCAAAACTGAAGAATTCATGGGAATGATGTATTTTATGGGATCAAGAACAAA
ACTGTAGTAGAATGATTCTACATCTTGAATATTTCTTTATATCATTGTAAATTTTACTTTGGAATTGACTGAGTAGAAAAGCAGAAAAAATTATCTACTTTTATAGTTGTGCTCTACCTTTGGGCCCT
TTGTTCAGATTATAATTTCACTAATAAATTAGATATGTATGCTAATATTTTCCTATTTCAAATAAAATGAGTTTATAGTCA

hide sequence

RefSeq Acc Id:

XM_040272176 ⟹ XP_040128110

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024407213	43,118,600 - 43,133,513 (+)	NCBI


Protein RefSeqs	XP_005333802	(Get FASTA)	NCBI Sequence Viewer
	XP_040128110	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000008616.3
GenBank Protein	KAG3264513	(Get FASTA)	NCBI Sequence Viewer
	KAG3264514	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:	XP_005333802 ⟸ XM_005333745
- Peptide Label:	isoform X2
- UniProtKB:	I3MDV4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MAKVNRPGSTSPPDGGWGWMIVAGCFLVTICTRALFRCISIFFVEFQTYFAQDYAQTAWIHSIVDCVTMLCAPLGSAVSNHLSCQVGIMLGGLLASTGFILGSFATSLKHLYLTLGVLTGLGFALCYS PAIAMVGKYFSRRKALAYGIAMSGSGIGTFVLAPVVQLLIEQFSWRGALLILGGFVLNLCVCGALMRPITLKEDRSSPEQKCDCRTQKEDCKRAAPYSPLTKEWAQTCLCCSLQQEYSFLLMPDFVVL AVSVLFMAYGCSPLFVYLVPYALSVGVSHQQAAFLMSILGVIDIIGNITFGWLTDRRCLKNYRYVCYLFAVGLDGLCYLCLPMLRSLPLLVPFSCTFGYFDGAYVTLIPVVTAEIVGTTSLSSALGVV YFLHAVPYLVSPPIAGWLVDTTGSYTAAFLLCGFSMIFSSVLLGFARLVKRMKRTQLPFLAKESDPKLQLWTNGSVAYSVARELDQKDGASVATAAPGYNLT hide sequence

RefSeq Acc Id:	XP_040128110 ⟸ XM_040272176
- Peptide Label:	isoform X1
- UniProtKB:	I3MDV4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSSTOP00000008616 ⟸ ENSSTOT00000009605

Protein Domains

Major facilitator superfamily (MFS) profile

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000009614	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000009605.3	UniProtKB/TrEMBL
Gene3D-CATH	1.20.1250.20	UniProtKB/TrEMBL
InterPro	MFS	UniProtKB/TrEMBL
	MFS_dom	UniProtKB/TrEMBL
	MFS_trans_sf	UniProtKB/TrEMBL
	Proton-linked_MCT	UniProtKB/TrEMBL
NCBI Gene	Slc16a12	ENTREZGENE
PANTHER	MONOCARBOXYLATE TRANSPORTER	UniProtKB/TrEMBL
	MONOCARBOXYLATE TRANSPORTER 12	UniProtKB/TrEMBL
Pfam	MFS_1	UniProtKB/TrEMBL
PROSITE	MFS	UniProtKB/TrEMBL
	PROKAR_LIPOPROTEIN	UniProtKB/TrEMBL
Superfamily-SCOP	SSF103473	UniProtKB/TrEMBL
UniProt	I3MDV4	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
		Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM

Send us a Message

Imported Disease Annotations - ClinVar

Imported Disease Annotations - OMIM