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Gene: Kpnb1 (karyopherin subunit beta 1) Ictidomys tridecemlineatus

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Symbol:

Kpnb1

Name:

karyopherin subunit beta 1

RGD ID:

12472582

Description:

ENCODES a protein that exhibits kinesin binding (ortholog); protein-containing complex binding (ortholog); INVOLVED IN protein import into nucleus (ortholog); ribosomal protein import into nucleus (ortholog); ASSOCIATED WITH hereditary breast ovarian cancer syndrome (ortholog); human immunodeficiency virus infectious disease (ortholog); ovarian carcinoma (ortholog); FOUND IN cytoplasm (ortholog); nuclear pore (ortholog); nucleoplasm (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

importin subunit beta-1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

SpeTri2.0 - Squirrel SpeTri2.0 Assembly

Position:

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	23,439,655 - 23,471,619 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936490	13,603,498 - 13,635,682 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936490	13,603,520 - 13,635,567 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

hereditary breast ovarian cancer syndrome (ISO)

human immunodeficiency virus infectious disease (ISO)

ovarian carcinoma (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

astral microtubule organization (IEA)

establishment of mitotic spindle localization (IEA)

mitotic chromosome movement towards spindle pole (IEA)

mitotic metaphase chromosome alignment (IEA)

mitotic spindle assembly (IEA)

NLS-bearing protein import into nucleus (IEA)

protein import into nucleus (IEA,ISO)

protein transport (IEA)

ribosomal protein import into nucleus (IEA,ISO)

RNA import into nucleus (IEA)

Cellular Component

cytoplasm (IEA,ISO)

cytoplasmic stress granule (IEA)

cytosol (IEA)

endoplasmic reticulum tubular network (IEA)

NLS-dependent protein nuclear import complex (IEA)

nuclear envelope (IEA)

nuclear membrane (IEA)

nuclear pore (ISO)

nucleoplasm (IEA,ISO)

protein-containing complex (IEA)

Molecular Function

enzyme binding (IEA)

Hsp90 protein binding (IEA)

importin-alpha family protein binding (IEA)

kinesin binding (ISO)

nuclear import signal receptor activity (IEA)

protein binding (ISO)

protein domain specific binding (IEA)

protein-containing complex binding (ISO)

small GTPase binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

Kpnb1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	23,439,655 - 23,471,619 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936490	13,603,498 - 13,635,682 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936490	13,603,520 - 13,635,567 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

KPNB1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	47,649,919 - 47,685,505 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	47,649,476 - 47,685,505 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	45,727,285 - 45,762,871 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	43,082,274 - 43,116,003 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	43,082,273 - 43,116,003	NCBI
Celera	17	42,179,952 - 42,213,682 (+)	NCBI		Celera
Cytogenetic Map	17	q21.32	NCBI
HuRef	17	41,096,264 - 41,130,080 (+)	NCBI		HuRef
CHM1_1	17	45,792,168 - 45,825,949 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	17	48,511,703 - 48,547,295 (+)	NCBI		T2T-CHM13v2.0

Kpnb1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	97,050,536 - 97,078,718 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	97,050,540 - 97,078,707 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	97,159,710 - 97,187,892 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	97,159,714 - 97,187,881 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	97,021,024 - 97,049,206 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	96,975,800 - 97,003,982 (-)	NCBI		MGSCv36	mm8
Celera	11	106,812,630 - 106,840,820 (-)	NCBI		Celera
Cytogenetic Map	11	D	NCBI
cM Map	11	60.95	NCBI

Kpnb1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	82,642,082 - 82,670,856 (-)	NCBI		GRCr8
mRatBN7.2	10	82,145,662 - 82,174,437 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	82,145,420 - 82,174,605 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	87,094,110 - 87,122,899 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	86,592,172 - 86,620,969 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	81,984,776 - 82,013,559 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	85,096,517 - 85,124,641 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	85,093,841 - 85,124,644 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	84,886,484 - 84,914,805 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	85,882,382 - 85,910,805 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	10	85,896,751 - 85,925,175 (-)	NCBI
Celera	10	80,906,145 - 80,931,812 (-)	NCBI		Celera
Cytogenetic Map	10	q31	NCBI

Kpnb1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955451	13,365,476 - 13,398,491 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955451	13,365,881 - 13,398,491 (-)	NCBI	ChiLan1.0	ChiLan1.0

KPNB1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	17,417,441 - 17,453,002 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	19,382,919 - 19,418,880 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	9,852,424 - 9,887,111 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	10,035,738 - 10,068,401 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	10,035,732 - 10,068,913 (-)	Ensembl	panpan1.1		panPan2

KPNB1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	24,004,191 - 24,031,370 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	24,003,968 - 24,028,531 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	23,470,348 - 23,497,535 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	24,796,218 - 24,823,411 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	24,795,998 - 24,821,055 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	23,566,722 - 23,593,892 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	23,827,962 - 23,855,184 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	23,954,771 - 23,981,965 (+)	NCBI		UU_Cfam_GSD_1.0

KPNB1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	23,916,164 - 23,944,588 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	23,915,783 - 23,945,407 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	23,785,821 - 23,813,399 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

KPNB1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	68,047,473 - 68,083,290 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	68,047,491 - 68,084,778 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	39,091,438 - 39,128,535 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Kpnb1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624795	4,371,749 - 4,403,217 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624795	4,372,014 - 4,403,061 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005321746	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005726345	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JAESOR010000662	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSSTOT00000007919 ⟹ ENSSTOP00000007087

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936490	13,603,498 - 13,635,682 (-)	Ensembl

Ensembl Acc Id:

ENSSTOT00000039331 ⟹ ENSSTOP00000025697

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
SpeTri2.0 Ensembl	NW_004936490	13,603,498 - 13,635,682 (-)	Ensembl

RefSeq Acc Id:

XM_005321746 ⟹ XP_005321803

Type:

CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	23,439,655 - 23,471,619 (+)	NCBI
SpeTri2.0	NW_004936490	13,603,520 - 13,635,567 (-)	NCBI

Sequence:

show sequence

GCCAATCGACGTGGAGCGCGGTGCCGCCGCGGAGAGGTTCAGCCCAATATCCCTCCGCCTTCCT
CCCTCCCTCCCTCTCTCTCTCCCTCCCCGAGAGCCGCCGCTCACTTACTGCCTCCCTTCCTTCT
TTCTCCCTCCGCCACCCGAGCACCAGCCGCGCTCTGAGCTGCCCCCGGGGTCCCTCCCCCGCCG
CCAGAGGAGCAGCTGCCGCCGCCGCCAGCAGCACATTAGGAGGGCGGAAGGAAGAAAAGAGGGG
AGGAAGGAGAGCTAGAGCGCCTGCCCAGAGGGAGCCGGTGAATGGGCTTGTGGTGACCCCCACC
CCCCACCCCACCCTCCCTTCCCACCCGACCCCCAACCCCCATCCCCAGTTGGAGCCGCCGCCCG
AGAGCCCGGACCGTCGTCTTAGGAGGAGTCGCCGCCGCCACCACCGCTATGGAGCTGATCACCA
TCCTCGAGAAGACCGTATCTCCGGATCGGCTGGAGCTGGAAGCGGCGCAGAAGTTCCTGGAGCG
TGCGGCTGTAGAAAACCTGCCCACTTTTCTTGTGGAACTGTCCAGAGTGCTGGCAAATCCAGGA
AACAGTCAGGTTGCCAGAGTTGCAGCTGGTCTACAAATCAAGAACTCTTTGACATCAAAAGATC
CAGATATCAAGGCACAGTATCAGCAGAGGTGGCTTGCTATTGATGCTAATGCACGACGGGAAGT
CAAGAACTATGTTTTGCAGACTTTGGGCACGGAAACATACCGGCCTAGCTCTGCCTCACAGTGT
GTAGCTGGTATTGCTTGTGCAGAGATCCCAGTAAACCAATGGCCAGAACTCATTCCTCAGCTGG
TGGCCAATGTCACAAACCCCAACAGCACAGAGCACATGAAAGAGTCAACATTGGAAGCTATTGG
GTACATTTGCCAAGATATAGACCCAGAGCAGCTACAGGATAAATCCAATGAGATTCTGACTGCC
ATAATCCAGGGGATGAGGAAAGAAGAGCCTAGTAATAATGTGAAGCTAGCTGCTACTAATGCAC
TCCTGAACTCATTGGAGTTCACCAAAGCAAACTTTGACAAAGAGTCCGAAAGGCACTTTATTAT
GCAGGTGGTCTGTGAAGCCACACAGTGTCCAGATACAAGGGTACGAGTGGCTGCTTTGCAGAAT
CTGGTGAAGATAATGTCCTTGTATTATCAGTACATGGAGACATATATGGGCCCTGCTCTTTTTG
CAATCACAATTGAAGCAATGAAAAGTGACATTGATGAGGTGGCCCTACAAGGAATAGAATTCTG
GTCCAATGTCTGTGATGAGGAAATGGATTTGGCCATTGAAGCTTCAGAGGCAGCAGAACAAGGA
CGGCCTCCTGAGCACACCAGCAAGTTTTATGCCAAGGGAGCACTACAATACCTGGTTCCCATCC
TCACACAGACGCTAACTAAACAGGATGAAAATGATGACGATGATGACTGGAACCCCTGCAAAGC
AGCAGGGGTGTGTCTCATGCTTCTTTCCACCTGCTGTGAAGATGACATTGTGCCGCATGTCCTC
CCCTTCATCAAAGAACACATTAAGAACCCAGATTGGCGATACCGGGATGCAGCAGTGATGGCTT
TTGGGTGTATCTTGGAAGGACCAGAGCCCAATCAGCTCAAACCACTGGTTATACAGGCTATGCC
CACCCTAATAGAATTAATGAAAGACCCCAGTGTAGTTGTTCGAGACACAACTGCATGGACTGTG
GGCAGAATTTGTGAATTGCTTCCTGAAGCTGCCATCAATGATGTCTACTTGGCTCCCTTGCTGC
AGTGTCTGATTGAGGGCCTCAGTGCTGAACCCAGAGTGGCTTCAAATGTATGCTGGGCATTTTC
CAGTCTGGCTGAAGCTGCTTATGAAGCTGCAGATGTAGCTGATGATCAAGAAGAACCAGCCACA
TATTGCCTGTCTTCTTCATTTGAGCTTATAGTTCAGAAACTCCTGGAAACCACAGACAGACCTG
ATGGACACCAGAACAACCTGAGGAGTTCTGCATATGAATCTCTAATGGAAATTGTAAAAAACAG
TGCCAAGGATTGTTACCCTGCTGTTCAAAAAACTACTTTGGTCATCATGGAACGACTACAGCAG
GTGCTTCAGATGGAGTCACATATCCAGAGCACATCTGATAGGATCCAGTTTAATGACCTTCAGT
CTTTACTCTGTGCAACTCTTCAGAATGTTCTCCGGAAAGTGCAACATCAAGATGCTTTGCAGAT
ATCTGATGTGGTCATGGCCTCCCTGTTAAGGATGTTCCAAAGCACAGCTGGCTCTGGGGGAGTC
CAGGAGGATGCCCTGATGGCAGTTAGCACGCTGGTGGAAGTGTTGGGTGGTGAATTCCTCAAGT
ACATGGAGGCCTTTAAACCCTTCCTGGGTATTGGATTGAAGAATTATGCTGAGTACCAGGTTTG
TTTGGCAGCTGTGGGCCTAGTGGGAGATTTGTGCCGTGCCCTGCAATCCAACATCTTACCTTTC
TGTGATGAGGTAATGCAGCTTCTGCTGGAGAACTTGGGGAATGAGAATGTCCACAGGTCTGTGA
AGCCGCAGATTCTGTCTGTGTTTGGTGATATTGCCCTTGCTATTGGTGGAGAATTTAAAAAATA
CCTAGAGGTTGTATTGAATACTCTTCAGCAGGCCTCCCAAGCCCAAGTGGACAAGTCCGACTAC
GACATGGTGGATTATCTGAATGAACTAAGAGAAGGCTGCTTGGAAGCCTATACTGGAATCGTCC
AGGGATTAAAAGGAGATCAGGAGAACGTACACCCTGATGTGATGCTGGTACAACCCAGAGTAGA
ATTTATTCTGTCTTTCATTGACCACATTGCTGGGGATGAGGATCATACAGATGGAGTAGTAGCC
TGTGCTGCTGGACTGATAGGGGACTTATGTACAGCATTTGGGAAAGATGTACTGAAATTAGTAG
AAGCTAGGCCAATGATCCATGAACTGTTAACTGAAGGCCGGAGATCGAAGACTAACAAAGCAAA
AACCCTTGCTACATGGGCCACAAAAGAACTGAGAAAACTGAAGAACCAAGCTTGATCTGTTACC
ATTGGGATGATAACCTGAGACCCCCACTGGAAATCTCCAATCTTTTGAAAAACCCGGAAGTGAG
GAGTGTGCACGGATGCTGAATGTTTGGGAATGAGAGGATGAGTGAGTGAGGCTTGAAAACACAC
CACATTGAAAATCCTGCCACAGCAGCAGCCGCAGCCGCCAACAGCAGCGCTGTTAGTGAGCTAA
GTAAGCACTGACTTCGTAGAAAACCATAACATCAGCCATCTTGGAAAAGAGAGAAACGACGGAT
TTACTTGCTTACAAAAAAAGCTGTCTCTTCCCAGGGGAGGCTAGAACTAGCTTTTCTGTCTTTT
GGCAGTGCCGAGTGGAATGACTGGTTTGGGAGAGGAAGAGGGACTGGGTTCAGCTGTGGTGCTT
TGTTGTAAAAGGCAGCCTGGCCTTTGCTACTGAGGAGAAAGATGGAGCCTGGGTCTCAAGCCCA
CCTTCGCTGTACCTTTGCCACACGGTATTGTACACGCGCAGGCTAGAAGGAGGGTGAGGGATTT
TTACAGTCTGAGAATGAGTGTGTGTGAGTGAGGCGGTATCCACATTCTCAACTTCAAGTCATTG
CAGTTTCTTTTTCCCAGAAAACAAGGGGTTAGATGTTGCATTTCATAAAACTAACCGAAGTTCT
GTCTACTGATGCAGCACAAGACATGTAAAAAAAAAAAGAGAAAAAAAAAAGGAAAGACGCTCTT
TAGGTTTTGTTTTGTTGGTTTTTTTTTTTTTTTTTTTTTTTTTTAATTATTTTAGGGAAAACAC
TGACGAATGGTCAGAGCTCCTATCCTGATCTTTTCATCAAGGCGCCTTTCCTAATAATATGGTT
CAACTGTGAATGTAGAAGGGGGGAGGGGGGAGAAAAATAAAACTCTGAAGTTAGAGGATATAGA
AAAATAAAAGTACAAATTGTTAATTGTTATAAATAAAGAATGCAGACTTAAAAGACAAAAAAGC
CACAACCCAGACCAAAATTTAAATGCTTGAAATTGGCAGCACAAAAGAAAAGCTCTCTCCTGAC
TTGTATCGTGGCAGTCTGAACGCCCCCAGAGAATTGTGCCAAAGAGTTTAGAAGACAAATAACC
AATAAAAGTAAACACACATGCGCGCACACACATACAAACATACACAACAGCAGACTTCAGGTAA
CTATTTTGGATTGCAAATGAGGATAAATTTAATGTTTAAACAATCTGATAAAATAACCATTTGG
AAACTGCTTGGCCTTCTGTTCTCTTTTATTTGATTGACTCCAATGCGGTATTGGTCTCTTGCTG
CACTTAAAAACCAACTAACCAACAAAACAAAAGTGTGTGTGTCTATATGTATGTATAGACACAC
ACACAGCAGAACTCATGATGAAAGTGGCACTTGAAAATGGTTATATTTTTCCACTGAAGTTTGA
AGATTAATAAAATGGTGTCAAACACTCCCCTGTTCACACATTTTAGTTTTTTGTTTTGTTTTTC
AAGTGTAATGTGCTGTGATTACCATAAACCAGAATCATTTTCCCTTTTACAAGGGAACAGGGCA
TCCTGAATTTTAGACTTTCAGCAATAAGAAGGGATGTTGGTGAGCTTTTGGTTTTTGCAGATAC
TAGGGAGTTTTTGCTGGCATTTGAGTATGCGGCTTTCAAAAAAAAAAAAAGCAAGGAAGGTTTT
TAAATTGCTTCCTAGTAGTTTAAGGATTAAAAAGCAAGACCCACTTTCATTTTCATCCTGTAAA
AAGCATGGGCTTATGTTTTTTCCCATCTCTTCCTTTCATCTTCCCTTCCCTGATCCAGCCTTCC
ATTCATAAGTGGGATTGGCTCGGTTTTGCCCATCCATATGGCAGCATCTCTAATAGCTCTTGTA
CAGGGTATCAGATATTGTGCCTTTTGGTGCCAGGTTCAAAGTCAAGTGCCGATCTATGAACCAG
TGTACAAAAAAAAAAAAAAAAATCCAGGTGTTTGAAGGAGAGACGCTCCATTGTGAATAGAGAA
CTCACACCAGCTCCTAAGCCTATTGAGAAGAGGGCCTGGTCCTCTTAATGCCTTGTTTCCATTT
TAGTTGTTTCTTGAGTGAGGGAAAATGATATACTAACCATTCCTGATACTAGGTAGGGTTGGGT
CAGGGCTTAGGGAGGGGCAGGAATATTGGGGAAAGAAAGAAAAAATAATCTGATCATTCCTCAG
TGCTACCCATTTCTGTCCTGTGTGGGTTGCTTAGCTAGACAGCAGGAGAATAAAGTACACCAAG
AACCATAATGAAAACAAAACCTTCCGTGTGTTTTGTTCCAGGGAACCAGTTGATAAGTGCTGTT
ATTAATGCTTTCTCCCAGATCCATTCAGTGTTGGAGAGGAGGAAATGGGCTGGTTGGATTGTGG
TCTTGGTGCCTTGTAGTTATTCTGCACTGGTTATGTATTTAATCCTCCTCTTTCCTAGATACCT
TTGGCAAGTGGATTTTCCATAGTCTGGGTATTTTCTTTAATCAGTTGTACCACCTAAGGCAACT
GGATGCAAATGCATTCTGTCCAATCACTGTCTGGGCCTTCCCCCACCCTAGTCTTGGCACATTC
CTTTAAGAATGTAGTTACCGTCTGCTTGGGAAGATGTCAGTGCAAATGTGAAGAAAATGGGCAT
CGGACTAGACTTTGGTTTGCCACAAGTGGCAGCTGCCTATACCAATTACATTTAATTTTGCTTT
TCATTTTTCCCTGTTCCCCTCAGCCCCCCTCTTGAAATGTGGAAATTTTAGCTGTCAGAGGCAA
CTGTAATATTGCCCTAGGGACTTGTGGAGAAAGGGAGGGGAATTGCTCAGTGTAGTGTTTTAAA
CTTTCAGAACCAAGCAACTATTTACTCTTACTATTTAAGAAGTGTGTTAGTCTGACTTTAAGAG
AAATCCAAACTCCATCAGCTTTTGATAGCATCTTGGTTTTTGAAACAACTTCAATCTGTAATTG
GCATTCAGAATGCCCTTGGCATGCCAGTCTGTGTGATGGCATTAAAGACCTGTTAAAACACTTG
AGCCCAACTTTATTAACCAAAACTGATACCACCACCTTTATCTTCTAAATAAAGTCCGCTTTAT
TTTTATTTTCAA

hide sequence

RefSeq Acc Id:

XR_005726345

Type:

NON-CODING

Position:

Squirrel Assembly	Chr	Position (strand)	Source
HiC_Itri_2	NW_024405602	23,439,699 - 23,471,619 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005321803	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSSTOP00000007087.3
	ENSSTOP00000025697.1
GenBank Protein	KAG3269141	(Get FASTA)	NCBI Sequence Viewer

RefSeq Acc Id:

XP_005321803 ⟸ XM_005321746

- UniProtKB:

A0A287CWL9 (UniProtKB/TrEMBL), I3MAN7 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MELITILEKTVSPDRLELEAAQKFLERAAVENLPTFLVELSRVLANPGNSQVARVAAGLQIKNS
LTSKDPDIKAQYQQRWLAIDANARREVKNYVLQTLGTETYRPSSASQCVAGIACAEIPVNQWPE
LIPQLVANVTNPNSTEHMKESTLEAIGYICQDIDPEQLQDKSNEILTAIIQGMRKEEPSNNVKL
AATNALLNSLEFTKANFDKESERHFIMQVVCEATQCPDTRVRVAALQNLVKIMSLYYQYMETYM
GPALFAITIEAMKSDIDEVALQGIEFWSNVCDEEMDLAIEASEAAEQGRPPEHTSKFYAKGALQ
YLVPILTQTLTKQDENDDDDDWNPCKAAGVCLMLLSTCCEDDIVPHVLPFIKEHIKNPDWRYRD
AAVMAFGCILEGPEPNQLKPLVIQAMPTLIELMKDPSVVVRDTTAWTVGRICELLPEAAINDVY
LAPLLQCLIEGLSAEPRVASNVCWAFSSLAEAAYEAADVADDQEEPATYCLSSSFELIVQKLLE
TTDRPDGHQNNLRSSAYESLMEIVKNSAKDCYPAVQKTTLVIMERLQQVLQMESHIQSTSDRIQ
FNDLQSLLCATLQNVLRKVQHQDALQISDVVMASLLRMFQSTAGSGGVQEDALMAVSTLVEVLG
GEFLKYMEAFKPFLGIGLKNYAEYQVCLAAVGLVGDLCRALQSNILPFCDEVMQLLLENLGNEN
VHRSVKPQILSVFGDIALAIGGEFKKYLEVVLNTLQQASQAQVDKSDYDMVDYLNELREGCLEA
YTGIVQGLKGDQENVHPDVMLVQPRVEFILSFIDHIAGDEDHTDGVVACAAGLIGDLCTAFGKD
VLKLVEARPMIHELLTEGRRSKTNKAKTLATWATKELRKLKNQA

hide sequence

Ensembl Acc Id:

ENSSTOP00000007087 ⟸ ENSSTOT00000007919

Ensembl Acc Id:

ENSSTOP00000025697 ⟸ ENSSTOT00000039331

Protein Domains

Importin N-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSSTOG00000007896	Ensembl, UniProtKB/TrEMBL
Ensembl Transcript	ENSSTOT00000007919.3	UniProtKB/TrEMBL
	ENSSTOT00000039331.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.10.10	UniProtKB/TrEMBL
InterPro	ARM-like	UniProtKB/TrEMBL
	ARM-type_fold	UniProtKB/TrEMBL
	Armadillo	UniProtKB/TrEMBL
	HEAT_type_2	UniProtKB/TrEMBL
	Importin-beta_N	UniProtKB/TrEMBL
	Importin_beta	UniProtKB/TrEMBL
NCBI Gene	Kpnb1	ENTREZGENE
PANTHER	IMPORTIN SUBUNIT BETA-1	UniProtKB/TrEMBL
	PTHR10527	UniProtKB/TrEMBL
Pfam	HEAT_EZ	UniProtKB/TrEMBL
	IBN_N	UniProtKB/TrEMBL
PROSITE	HEAT_REPEAT	UniProtKB/TrEMBL
	IMPORTIN_B_NT	UniProtKB/TrEMBL
SMART	ARM	UniProtKB/TrEMBL
	IBN_N	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48371	UniProtKB/TrEMBL
UniProt	A0A287CWL9	ENTREZGENE, UniProtKB/TrEMBL
	I3MAN7	ENTREZGENE, UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD