TMEM161A (transmembrane protein 161A)

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Gene: TMEM161A (transmembrane protein 161A) Canis lupus familiaris

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Symbol:

TMEM161A

Name:

transmembrane protein 161A

RGD ID:

12425533

Description:

INVOLVED IN cellular response to oxidative stress (inferred); cellular response to UV (inferred); negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage (inferred); ASSOCIATED WITH Megalencephaly-Polymicrogyria-Polydactyly-Hydrocephalus Syndrome 1 (ortholog); progressive myoclonus epilepsy 8 (ortholog); FOUND IN membrane (inferred)

Type:

protein-coding

RefSeq Status:

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	44,021,722 - 44,037,985 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	44,020,919 - 44,037,938 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	43,938,526 - 43,954,585 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	44,509,581 - 44,525,939 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	44,509,655 - 44,525,939 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	43,746,934 - 43,763,372 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	44,156,409 - 44,172,432 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	44,431,810 - 44,448,294 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Megalencephaly-Polymicrogyria-Polydactyly-Hydrocephalus Syndrome 1 (ISO)

progressive myoclonus epilepsy 8 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

cellular response to oxidative stress (IEA)

cellular response to UV (IEA)

negative regulation of intrinsic apoptotic signaling pathway in response to DNA damage (IEA)

positive regulation of DNA repair (IEA)

response to retinoic acid (IEA)

Cellular Component

membrane (IEA)

Molecular Function

protein binding (ISO)

References

Genomics

Comparative Map Data

TMEM161A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	44,021,722 - 44,037,985 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	44,020,919 - 44,037,938 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	43,938,526 - 43,954,585 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	44,509,581 - 44,525,939 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	44,509,655 - 44,525,939 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	43,746,934 - 43,763,372 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	44,156,409 - 44,172,432 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	44,431,810 - 44,448,294 (+)	NCBI		UU_Cfam_GSD_1.0

TMEM161A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	19	19,119,169 - 19,138,478 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	19	19,119,169 - 19,138,513 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	19	19,229,978 - 19,249,287 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	19	19,091,430 - 19,110,267 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	19	19,135,267 - 19,154,101 (-)	NCBI		Celera
Cytogenetic Map	19	p13.11	NCBI
HuRef	19	18,794,915 - 18,813,863 (-)	NCBI		HuRef
CHM1_1	19	19,230,139 - 19,249,025 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	19	19,255,708 - 19,275,014 (-)	NCBI		T2T-CHM13v2.0

Tmem161a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	70,624,979 - 70,636,331 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	70,625,006 - 70,636,331 (+)	Ensembl		GRCm39 Ensembl
GRCm38	8	70,172,329 - 70,183,681 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	70,172,356 - 70,183,681 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	72,696,310 - 72,707,562 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	73,101,398 - 73,112,652 (+)	NCBI		MGSCv36	mm8
Celera	8	72,727,873 - 72,739,551 (+)	NCBI		Celera
Cytogenetic Map	8	B3.3	NCBI
cM Map	8	34.15	NCBI

Tmem161a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	16	19,272,433 - 19,282,173 (-)	NCBI		GRCr8
mRatBN7.2	16	19,237,638 - 19,248,151 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	16	19,238,487 - 19,248,087 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	16	19,278,142 - 19,287,749 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	16	20,410,467 - 20,420,067 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	16	19,331,102 - 19,340,709 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	16	20,985,841 - 20,996,351 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	16	20,986,687 - 20,994,379 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	16	20,835,785 - 20,846,295 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	16	19,721,497 - 19,731,098 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	16	19,722,171 - 19,731,083 (-)	NCBI
Celera	16	19,427,132 - 19,436,733 (-)	NCBI		Celera
Cytogenetic Map	16	p14	NCBI

Tmem161a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955524	2,666,885 - 2,674,215 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955524	2,667,089 - 2,674,550 (+)	NCBI	ChiLan1.0	ChiLan1.0

TMEM161A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	20	23,982,028 - 24,000,981 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	19	22,988,175 - 23,007,097 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	19	18,557,799 - 18,576,722 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	19	19,560,046 - 19,578,779 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	19	19,560,046 - 19,578,779 (-)	Ensembl	panpan1.1		panPan2

Tmem161a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405118	202,725,769 - 202,737,629 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936596	2,274,989 - 2,287,580 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936596	2,274,989 - 2,287,288 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TMEM161A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	58,728,813 - 58,744,937 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	58,728,738 - 58,744,939 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1

TMEM161A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	6	17,586,202 - 17,604,835 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	6	17,584,268 - 17,601,206 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666074	1,715,635 - 1,734,859 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tmem161a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624908	2,056,885 - 2,061,872 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624908	2,056,642 - 2,064,137 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TMEM161A
168 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_014122303	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038428071	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038428072	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038428073	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038428074	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038455681	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038455682	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038455683	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038503730	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038503731	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038503732	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038503733	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038566754	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038566755	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038566756	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038566757	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038630896	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038630897	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038630898	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038630899	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000236	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000291	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000022831 ⟹ ENSCAFP00000021206

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	20	44,024,630 - 44,037,938 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000068648 ⟹ ENSCAFP00000054192

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	20	44,020,919 - 44,037,938 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000077019 ⟹ ENSCAFP00000056961

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	20	44,020,919 - 44,037,938 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000087262 ⟹ ENSCAFP00000059191

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	20	44,020,919 - 44,037,938 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000092754 ⟹ ENSCAFP00000062603

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	20	44,020,919 - 44,037,938 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845032591 ⟹ ENSCAFP00845025492

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	44,509,655 - 44,525,939 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845032654 ⟹ ENSCAFP00845025540

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	44,509,663 - 44,525,939 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845032743 ⟹ ENSCAFP00845025617

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	44,509,671 - 44,525,932 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845032832 ⟹ ENSCAFP00845025698

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	44,509,671 - 44,525,932 (+)	Ensembl

RefSeq Acc Id:

XM_014122303 ⟹ XP_013977778

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	20	44,021,722 - 44,037,985 (+)	NCBI
Dog10K_Boxer_Tasha	20	43,938,599 - 43,954,585 (+)	NCBI

Sequence:

show sequence

GACCTCGCTCCCGCCGGCGACATGGTTCAGGGAAAGGCTTTGAGGAGGAGAGGGACGTGGGCCG
ATGCGGGGCTCCAGATATCTTTGGAAACCTGCAGAGCCAGGACCTCAAGACGGAGGCTGCTGGG
GGGCGGGGCTTGAGAAACGCCCCTGGACCGACCTCAGGAGCCTCAGGCGGAGGGATGCCTGTCT
TTCTTCCCTCCTTACCTTCTCCTGCCCTCCTTCCTTGCTCCTTCTTCCCTCCCTCTCTCCTTCC
TTCCTTCTATCCTGCCTGTCCTAGGTGCTGGAACCGAAAGGCGGTCCTGGGAGTGCAGCTGGTG
GTGACCCTGCTCACCGCCACCCTCATGCATAGGCTGGCACCTCACTGCTCCTTCGCACGCTGGC
TGCTCTGCAACGGCAGTCTCTTCCGATACAAGCATCCTACTGAGGAAGAGCTTCGGTCCCTGGA
GGGAAAGCCGAGGCCCAGAGGCAGGAAGGAGCGGTGGGCCAATGGCTATAGTGAAGAAAAGCCC
CTGTCTGTGCCCCGAGACGCCCCTTTCCAGCTGGAGACCTGCCCCCTCACAGCAGTTGATGCCC
TCGTCCTGCGCTTCTTCCTGGAGTACCAGTGGTTCGTGGACTTCGCCGTGTACTCGGGCGGCGT
GTACGTCTTCACAGAGGCCTACTACTACGTGCTGGGCCCGGCCAAGGAGACCAACATCGCCGTG
TTCTGGTGCCTGCTCACCATCGCCTTCTCCATCAAGATGTTCCTGATGGTGACCCGCTTGTACT
TCAGCACCGAGGAAGGGGGCGAACGCTCTGTCTGCCTCACCTTTGCCTTCCTCTTTCTGCTCCT
GGCCATGCTGGTACAGGTGGTCCAGGAGGACACTCTCGAGCTGGGGCTGGAGCCAGGCCTGGCC
AGTATGACCCAGAACTTGGAGCCACTTCTGAAGACGCAGGGCTGGGACTGGGCGCTCCCACTGG
CCAAGCTGGCCATCCGCATAGGGCTGGCATTCGTGGGGTCCATGCTAGGTGCCTTCCTCACCTT
TCCGGGCCTGCGGCTGGCCCAGACACACCTGGATGCACTGACCATGTCGGAAGACCGGCCCACA
CTGCAGTTCTTTCTTCATATCAGCTTCCTGTCCCCTCTGATCATCCTGTGGCTCTGGACCAAGC
CCATTGCACGAGACTTCCTGCACCAGGCACCACCTGGGGAGATGCCCTTCTCCCTGCTGTCGGA
CTCAGCCTTCGACTCCCTGCGCCTCTGGGTGCTGGTGGCACTGTGCCTGCTAAGGCTGGCAGTG
ACCAGGCCCCACCTGCAGGCCTACCTGTGCTTGGCCAAGGCCCGCGTGGAGCAGCTGCGCCGGG
AGGCCGGCCGCATAGAGGCCCGCGAGATCCAGAGGCGGGTGGTGCGAGTCTATTGCTACCTGAC
GGTGGTGAGTCTGCAGTACCTGACGCCGCTCATCTTCACCCTCAGCTGCACCCTGCTGCTCAAG
ACAATGTGCGGCTACTCCTGGGGCCCGGGCCGGATCCCCGTGCAGTCCCGGACCCCGTCCTCCA
CCCACGATCGCCTGGGGGGCCTGGGGGACGACGAGGCCCAGCAGACAGCGGCGCTGATCGCTGG
GGCCCTGGGCAGCCTGCTCACGCCCCTCTTCCTCCGCGCCATCCTCACCTTCCTCATCTGGTGG
ACAGCCGCCTGCCAGCTGCTCTCCAGCCTCTTCGGCCTCTACTTCCAGCGGCACCTGGCGGGCT
CCTAGCCGCCCGCAGACACTCCTGGGGCCCCGAGGCCCGGGCCTGAGCCAGCGGTGTAAGGGCC
GCTTCCTCCGCGTGTGCCTCAGTATCCTCCGGTGCCAGGTGGGCCTGGGGGGCCCCCGCAGCAC
CTGCTGTGCCCGCCCACTTCACCGCAGTGCCTGAGCCCTGGGCCCCTTGGGTCCCATGTTTCTG
CCTCAAAACTCTTGCCCTGGGCCCCGTGCCAGAGGATCCCAGGGCCATTGTCCCTGGATGGCAT
GCCCCCGCGCCCCGCTATTTGACGCACAGGTTGGAGGGTCATTCTTCTGAACAAATAAAAGAAC
AGGCTGATTTTTACTATCA

hide sequence

RefSeq Acc Id:

XM_038428071 ⟹ XP_038283999

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	44,509,654 - 44,525,939 (+)	NCBI

RefSeq Acc Id:

XM_038428072 ⟹ XP_038284000

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	44,509,581 - 44,525,939 (+)	NCBI

RefSeq Acc Id:

XM_038428073 ⟹ XP_038284001

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	44,509,654 - 44,525,939 (+)	NCBI

RefSeq Acc Id:

XM_038428074 ⟹ XP_038284002

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	44,512,622 - 44,525,939 (+)	NCBI

RefSeq Acc Id:

XM_038455681 ⟹ XP_038311609

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	20	43,938,526 - 43,954,585 (+)	NCBI

RefSeq Acc Id:

XM_038455682 ⟹ XP_038311610

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	20	43,938,599 - 43,954,585 (+)	NCBI

RefSeq Acc Id:

XM_038455683 ⟹ XP_038311611

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	20	43,941,567 - 43,954,585 (+)	NCBI

RefSeq Acc Id:

XM_038503730 ⟹ XP_038359658

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	43,747,007 - 43,763,372 (+)	NCBI

RefSeq Acc Id:

XM_038503731 ⟹ XP_038359659

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	43,746,934 - 43,763,372 (+)	NCBI

RefSeq Acc Id:

XM_038503732 ⟹ XP_038359660

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	43,747,007 - 43,763,372 (+)	NCBI

RefSeq Acc Id:

XM_038503733 ⟹ XP_038359661

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	43,749,975 - 43,763,372 (+)	NCBI

RefSeq Acc Id:

XM_038566754 ⟹ XP_038422682

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	44,431,883 - 44,448,294 (+)	NCBI

RefSeq Acc Id:

XM_038566755 ⟹ XP_038422683

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	44,431,810 - 44,448,294 (+)	NCBI

RefSeq Acc Id:

XM_038566756 ⟹ XP_038422684

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	44,431,883 - 44,448,294 (+)	NCBI

RefSeq Acc Id:

XM_038566757 ⟹ XP_038422685

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	44,434,851 - 44,448,294 (+)	NCBI

RefSeq Acc Id:

XM_038630896 ⟹ XP_038486824

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	44,156,482 - 44,172,432 (+)	NCBI

RefSeq Acc Id:

XM_038630897 ⟹ XP_038486825

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	44,156,409 - 44,172,432 (+)	NCBI

RefSeq Acc Id:

XM_038630898 ⟹ XP_038486826

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	44,156,482 - 44,172,432 (+)	NCBI

RefSeq Acc Id:

XM_038630899 ⟹ XP_038486827

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	44,159,450 - 44,172,432 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_013977778	(Get FASTA)	NCBI Sequence Viewer
	XP_038283999	(Get FASTA)	NCBI Sequence Viewer
	XP_038284000	(Get FASTA)	NCBI Sequence Viewer
	XP_038284001	(Get FASTA)	NCBI Sequence Viewer
	XP_038284002	(Get FASTA)	NCBI Sequence Viewer
	XP_038311609	(Get FASTA)	NCBI Sequence Viewer
	XP_038311610	(Get FASTA)	NCBI Sequence Viewer
	XP_038311611	(Get FASTA)	NCBI Sequence Viewer
	XP_038359658	(Get FASTA)	NCBI Sequence Viewer
	XP_038359659	(Get FASTA)	NCBI Sequence Viewer
	XP_038359660	(Get FASTA)	NCBI Sequence Viewer
	XP_038359661	(Get FASTA)	NCBI Sequence Viewer
	XP_038422682	(Get FASTA)	NCBI Sequence Viewer
	XP_038422683	(Get FASTA)	NCBI Sequence Viewer
	XP_038422684	(Get FASTA)	NCBI Sequence Viewer
	XP_038422685	(Get FASTA)	NCBI Sequence Viewer
	XP_038486824	(Get FASTA)	NCBI Sequence Viewer
	XP_038486825	(Get FASTA)	NCBI Sequence Viewer
	XP_038486826	(Get FASTA)	NCBI Sequence Viewer
	XP_038486827	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000021206.5
	ENSCAFP00000054192.2
	ENSCAFP00000056961.2
	ENSCAFP00000062603.2
	ENSCAFP00030021989.1
	ENSCAFP00030022171.1
	ENSCAFP00030022234.1
	ENSCAFP00030022317.1
	ENSCAFP00040035105.1
	ENSCAFP00040035163.1
	ENSCAFP00040035179.1
	ENSCAFP00040035234.1
	ENSCAFP00845025492.1
	ENSCAFP00845025540
	ENSCAFP00845025540.1
	ENSCAFP00845025617.1
	ENSCAFP00845025698
	ENSCAFP00845025698.1

RefSeq Acc Id:	XP_013977778 ⟸ XM_014122303
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0NKX0 (UniProtKB/TrEMBL), A0A8I3P7M6 (UniProtKB/TrEMBL), A0A8P0TE86 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPVFLPSLPSPALLPCSFFPPSLLPSFYPACPRCWNRKAVLGVQLVVTLLTATLMHRLAPHCSF ARWLLCNGSLFRYKHPTEEELRSLEGKPRPRGRKERWANGYSEEKPLSVPRDAPFQLETCPLTA VDALVLRFFLEYQWFVDFAVYSGGVYVFTEAYYYVLGPAKETNIAVFWCLLTIAFSIKMFLMVT RLYFSTEEGGERSVCLTFAFLFLLLAMLVQVVQEDTLELGLEPGLASMTQNLEPLLKTQGWDWA LPLAKLAIRIGLAFVGSMLGAFLTFPGLRLAQTHLDALTMSEDRPTLQFFLHISFLSPLIILWL WTKPIARDFLHQAPPGEMPFSLLSDSAFDSLRLWVLVALCLLRLAVTRPHLQAYLCLAKARVEQ LRREAGRIEAREIQRRVVRVYCYLTVVSLQYLTPLIFTLSCTLLLKTMCGYSWGPGRIPVQSRT PSSTHDRLGGLGDDEAQQTAALIAGALGSLLTPLFLRAILTFLIWWTAACQLLSSLFGLYFQRH LAGS hide sequence

Ensembl Acc Id:

ENSCAFP00000062603 ⟸ ENSCAFT00000092754

Ensembl Acc Id:

ENSCAFP00000056961 ⟸ ENSCAFT00000077019

Ensembl Acc Id:

ENSCAFP00000059191 ⟸ ENSCAFT00000087262

Ensembl Acc Id:

ENSCAFP00000054192 ⟸ ENSCAFT00000068648

Ensembl Acc Id:

ENSCAFP00000021206 ⟸ ENSCAFT00000022831

RefSeq Acc Id:	XP_038359659 ⟸ XM_038503731
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038359658 ⟸ XM_038503730
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038359660 ⟸ XM_038503732
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038359661 ⟸ XM_038503733
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038486825 ⟸ XM_038630897
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038486824 ⟸ XM_038630896
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038486826 ⟸ XM_038630898
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038486827 ⟸ XM_038630899
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038284000 ⟸ XM_038428072
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0KIR4 (UniProtKB/TrEMBL), A0A8C0TFY4 (UniProtKB/TrEMBL), A0A8I3P7M6 (UniProtKB/TrEMBL), A0A8P0TE86 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038283999 ⟸ XM_038428071
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0NKX0 (UniProtKB/TrEMBL), A0A8I3P7M6 (UniProtKB/TrEMBL), A0A8P0TE86 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038284001 ⟸ XM_038428073
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3P7M6 (UniProtKB/TrEMBL), A0A8P0TE86 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038284002 ⟸ XM_038428074
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0KIS4 (UniProtKB/TrEMBL), A0A8C0Z3Z4 (UniProtKB/TrEMBL), A0A8I3NVN9 (UniProtKB/TrEMBL), A0A8I3P7M6 (UniProtKB/TrEMBL), A0A8P0TE86 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038311609 ⟸ XM_038455681
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0KIR4 (UniProtKB/TrEMBL), A0A8C0TFY4 (UniProtKB/TrEMBL), A0A8I3P7M6 (UniProtKB/TrEMBL), A0A8P0TE86 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038311610 ⟸ XM_038455682
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3P7M6 (UniProtKB/TrEMBL), A0A8P0TE86 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038311611 ⟸ XM_038455683
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0KIS4 (UniProtKB/TrEMBL), A0A8C0Z3Z4 (UniProtKB/TrEMBL), A0A8I3NVN9 (UniProtKB/TrEMBL), A0A8I3P7M6 (UniProtKB/TrEMBL), A0A8P0TE86 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038422683 ⟸ XM_038566755
- Peptide Label:	isoform X2
- UniProtKB:	A0A8C0KIR4 (UniProtKB/TrEMBL), A0A8C0TFY4 (UniProtKB/TrEMBL), A0A8I3P7M6 (UniProtKB/TrEMBL), A0A8P0TE86 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038422682 ⟸ XM_038566754
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0NKX0 (UniProtKB/TrEMBL), A0A8I3P7M6 (UniProtKB/TrEMBL), A0A8P0TE86 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038422684 ⟸ XM_038566756
- Peptide Label:	isoform X3
- UniProtKB:	A0A8I3P7M6 (UniProtKB/TrEMBL), A0A8P0TE86 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038422685 ⟸ XM_038566757
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0KIS4 (UniProtKB/TrEMBL), A0A8C0Z3Z4 (UniProtKB/TrEMBL), A0A8I3NVN9 (UniProtKB/TrEMBL), A0A8I3P7M6 (UniProtKB/TrEMBL), A0A8P0TE86 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845025617 ⟸ ENSCAFT00845032743

Ensembl Acc Id:

ENSCAFP00845025492 ⟸ ENSCAFT00845032591

Ensembl Acc Id:

ENSCAFP00845025698 ⟸ ENSCAFT00845032832

Ensembl Acc Id:

ENSCAFP00845025540 ⟸ ENSCAFT00845032654

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000014369	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030013538	UniProtKB/TrEMBL
	ENSCAFG00040021673	UniProtKB/TrEMBL
	ENSCAFG00845018423	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000022831.5	UniProtKB/TrEMBL
	ENSCAFT00000068648.2	UniProtKB/TrEMBL
	ENSCAFT00000077019.2	UniProtKB/TrEMBL
	ENSCAFT00000092754.2	UniProtKB/TrEMBL
	ENSCAFT00030025186.1	UniProtKB/TrEMBL
	ENSCAFT00030025386.1	UniProtKB/TrEMBL
	ENSCAFT00030025466.1	UniProtKB/TrEMBL
	ENSCAFT00030025561.1	UniProtKB/TrEMBL
	ENSCAFT00040040225.1	UniProtKB/TrEMBL
	ENSCAFT00040040292.1	UniProtKB/TrEMBL
	ENSCAFT00040040317.1	UniProtKB/TrEMBL
	ENSCAFT00040040382.1	UniProtKB/TrEMBL
	ENSCAFT00845032591.1	UniProtKB/TrEMBL
	ENSCAFT00845032654	ENTREZGENE
	ENSCAFT00845032654.1	UniProtKB/TrEMBL
	ENSCAFT00845032743.1	UniProtKB/TrEMBL
	ENSCAFT00845032832	ENTREZGENE
	ENSCAFT00845032832.1	UniProtKB/TrEMBL
InterPro	Transmembrane_161A/B	UniProtKB/TrEMBL
NCBI Gene	TMEM161A	ENTREZGENE
PANTHER	PTHR13624	UniProtKB/TrEMBL
	TRANSMEMBRANE PROTEIN 161A	UniProtKB/TrEMBL
Pfam	Tmemb_161AB	UniProtKB/TrEMBL
UniProt	A0A8C0KIR4	ENTREZGENE
	A0A8C0KIS4	ENTREZGENE
	A0A8C0N6V2_CANLF	UniProtKB/TrEMBL
	A0A8C0NB11_CANLF	UniProtKB/TrEMBL
	A0A8C0NBF5_CANLF	UniProtKB/TrEMBL
	A0A8C0NKX0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0TFY4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0Z3Z4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NVJ8_CANLF	UniProtKB/TrEMBL
	A0A8I3NVN9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NWM6_CANLF	UniProtKB/TrEMBL
	A0A8I3P7M6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0P699_CANLF	UniProtKB/TrEMBL
	A0A8P0TE86	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:47489	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar