HTR4 (5-hydroxytryptamine receptor 4) - Rat Genome Database

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Gene: HTR4 (5-hydroxytryptamine receptor 4) Canis lupus familiaris
Analyze
Symbol: HTR4
Name: 5-hydroxytryptamine receptor 4
RGD ID: 12412643
Description: ENCODES a protein that exhibits G protein-coupled serotonin receptor activity (ortholog); INVOLVED IN adenylate cyclase-activating G protein-coupled receptor signaling pathway (ortholog); gamma-aminobutyric acid signaling pathway (ortholog); PARTICIPATES IN serotonin signaling pathway via receptors engaging G alphas protein family; ASSOCIATED WITH Anorexia (ortholog); anorexia nervosa (ortholog); atrial fibrillation (ortholog); FOUND IN glutamatergic synapse (ortholog); plasma membrane (ortholog); postsynapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1460,224,534 - 60,359,244 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl460,185,056 - 60,353,439 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha459,949,833 - 60,122,933 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0460,674,206 - 60,843,707 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl460,674,419 - 60,840,580 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1460,454,461 - 60,627,575 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0460,581,160 - 60,754,247 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0461,099,415 - 61,272,556 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component
cytoplasm  (IEA)
endosome  (IEA)
endosome membrane  (IEA)
glutamatergic synapse  (IEA,ISO)
membrane  (IEA)
plasma membrane  (IEA,ISO)
postsynapse  (IEA,ISO)
synapse  (IEA)

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
HTR4
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1460,224,534 - 60,359,244 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl460,185,056 - 60,353,439 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha459,949,833 - 60,122,933 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0460,674,206 - 60,843,707 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl460,674,419 - 60,840,580 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1460,454,461 - 60,627,575 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0460,581,160 - 60,754,247 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0461,099,415 - 61,272,556 (+)NCBIUU_Cfam_GSD_1.0
HTR4
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh385148,451,032 - 148,654,527 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl5148,446,042 - 148,677,235 (-)EnsemblGRCh38hg38GRCh38
GRCh375147,830,595 - 148,034,090 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 365147,810,788 - 148,013,934 (-)NCBINCBI36Build 36hg18NCBI36
Build 345147,841,291 - 148,013,909NCBI
Celera5143,909,957 - 144,112,979 (-)NCBICelera
Cytogenetic Map5q32NCBI
HuRef5142,977,652 - 143,180,200 (-)NCBIHuRef
CHM1_15147,263,294 - 147,466,440 (-)NCBICHM1_1
T2T-CHM13v2.05148,985,559 - 149,189,026 (-)NCBIT2T-CHM13v2.0
Htr4
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391862,456,618 - 62,636,098 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1862,457,275 - 62,629,648 (+)EnsemblGRCm39 Ensembl
GRCm381862,323,546 - 62,503,027 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1862,324,204 - 62,496,577 (+)EnsemblGRCm38mm10GRCm38
MGSCv371862,483,858 - 62,627,456 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361862,449,573 - 62,593,171 (+)NCBIMGSCv36mm8
Celera1863,595,586 - 63,739,634 (+)NCBICelera
Cytogenetic Map18E1NCBI
cM Map1835.1NCBI
Htr4
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81858,036,277 - 58,221,327 (+)NCBIGRCr8
mRatBN7.21855,765,981 - 55,949,921 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1855,766,725 - 55,949,321 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1857,859,595 - 58,004,005 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01858,573,357 - 58,718,297 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01856,389,844 - 56,534,835 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01857,637,013 - 57,820,317 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1857,654,290 - 57,819,698 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01856,863,669 - 57,046,345 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41858,417,163 - 58,468,888 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11858,489,392 - 58,542,436 (+)NCBI
Celera1853,929,187 - 54,054,080 (+)NCBICelera
Cytogenetic Map18q12.1NCBI
Htr4
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554155,685,309 - 5,802,409 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554155,745,056 - 5,802,409 (+)NCBIChiLan1.0ChiLan1.0
HTR4
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v24143,683,697 - 144,013,085 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan15141,823,246 - 142,152,592 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v05143,918,925 - 144,208,779 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.15149,889,969 - 150,097,024 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl5149,889,969 - 150,108,357 (-)Ensemblpanpan1.1panPan2
Htr4
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213144,536,506 - 144,732,575 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365046,146,974 - 6,265,631 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365046,146,974 - 6,306,000 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
HTR4
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl2149,731,034 - 149,912,495 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.12149,768,295 - 149,813,801 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22156,451,710 - 156,485,863 (-)NCBISscrofa10.2Sscrofa10.2susScr3
HTR4
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12351,087,430 - 51,279,915 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2351,087,285 - 51,182,200 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603426,474,972 - 26,668,312 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Htr4
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247747,887,577 - 8,027,500 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247747,851,451 - 8,027,524 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in HTR4
1485 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
2 5 1 22 20 14 4 5 4 5 22 13 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_022417830 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022417831 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022417832 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473990 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473991 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038473992 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038498074 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038498079 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038498083 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038498085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038498087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038535084 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038535085 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038535086 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038535087 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038535088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038599380 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038599381 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038599382 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038599383 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038599384 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038663690 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038663691 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038663692 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038663693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038663694 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000051 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000088 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000355 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000004 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000029146   ⟹   ENSCAFP00000027104
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl460,202,767 - 60,331,161 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000048142   ⟹   ENSCAFP00000041232
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl460,185,056 - 60,326,185 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000073692   ⟹   ENSCAFP00000055715
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl460,202,767 - 60,341,729 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000078022   ⟹   ENSCAFP00000055864
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl460,223,800 - 60,326,185 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000083351   ⟹   ENSCAFP00000052526
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl460,202,767 - 60,353,439 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000092195   ⟹   ENSCAFP00000046436
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl460,202,767 - 60,326,185 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845018857   ⟹   ENSCAFP00845014726
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl460,674,419 - 60,840,580 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845018902   ⟹   ENSCAFP00845014768
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl460,674,419 - 60,829,627 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845018952   ⟹   ENSCAFP00845014809
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl460,674,419 - 60,825,823 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845018988   ⟹   ENSCAFP00845014833
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl460,674,419 - 60,819,877 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845019014   ⟹   ENSCAFP00845014855
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl460,674,419 - 60,814,931 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845019187   ⟹   ENSCAFP00845014988
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl460,674,419 - 60,814,931 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845019217   ⟹   ENSCAFP00845015013
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl460,674,419 - 60,793,822 (+)Ensembl
RefSeq Acc Id: XM_038473988   ⟹   XP_038329916
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1460,454,461 - 60,596,962 (+)NCBI
RefSeq Acc Id: XM_038473989   ⟹   XP_038329917
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1460,454,660 - 60,596,962 (+)NCBI
RefSeq Acc Id: XM_038473990   ⟹   XP_038329918
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1460,454,461 - 60,627,575 (+)NCBI
RefSeq Acc Id: XM_038473991   ⟹   XP_038329919
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1460,454,461 - 60,596,962 (+)NCBI
RefSeq Acc Id: XM_038473992   ⟹   XP_038329920
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1460,454,461 - 60,627,575 (+)NCBI
RefSeq Acc Id: XM_038498074   ⟹   XP_038354002
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha459,949,833 - 60,092,324 (+)NCBI
RefSeq Acc Id: XM_038498079   ⟹   XP_038354007
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha459,950,032 - 60,092,324 (+)NCBI
RefSeq Acc Id: XM_038498083   ⟹   XP_038354011
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha459,949,833 - 60,122,933 (+)NCBI
RefSeq Acc Id: XM_038498085   ⟹   XP_038354013
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha459,949,833 - 60,092,324 (+)NCBI
RefSeq Acc Id: XM_038498087   ⟹   XP_038354015
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha459,949,833 - 60,122,933 (+)NCBI
RefSeq Acc Id: XM_038535084   ⟹   XP_038391012
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0461,099,415 - 61,241,916 (+)NCBI
RefSeq Acc Id: XM_038535085   ⟹   XP_038391013
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0461,099,614 - 61,241,916 (+)NCBI
RefSeq Acc Id: XM_038535086   ⟹   XP_038391014
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0461,099,415 - 61,272,556 (+)NCBI
RefSeq Acc Id: XM_038535087   ⟹   XP_038391015
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0461,099,415 - 61,241,916 (+)NCBI
RefSeq Acc Id: XM_038535088   ⟹   XP_038391016
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0461,099,415 - 61,272,556 (+)NCBI
RefSeq Acc Id: XM_038599380   ⟹   XP_038455308
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0460,581,160 - 60,721,875 (+)NCBI
RefSeq Acc Id: XM_038599381   ⟹   XP_038455309
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0460,581,359 - 60,721,875 (+)NCBI
RefSeq Acc Id: XM_038599382   ⟹   XP_038455310
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0460,581,160 - 60,754,247 (+)NCBI
RefSeq Acc Id: XM_038599383   ⟹   XP_038455311
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0460,581,160 - 60,721,875 (+)NCBI
RefSeq Acc Id: XM_038599384   ⟹   XP_038455312
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0460,581,160 - 60,754,247 (+)NCBI
RefSeq Acc Id: XM_038663690   ⟹   XP_038519618
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0460,674,206 - 60,816,695 (+)NCBI
RefSeq Acc Id: XM_038663691   ⟹   XP_038519619
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0460,674,405 - 60,816,695 (+)NCBI
RefSeq Acc Id: XM_038663692   ⟹   XP_038519620
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0460,674,206 - 60,843,707 (+)NCBI
RefSeq Acc Id: XM_038663693   ⟹   XP_038519621
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0460,674,206 - 60,816,695 (+)NCBI
RefSeq Acc Id: XM_038663694   ⟹   XP_038519622
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0460,674,206 - 60,843,707 (+)NCBI
Protein Sequences
Protein RefSeqs XP_038329916 (Get FASTA)   NCBI Sequence Viewer  
  XP_038329917 (Get FASTA)   NCBI Sequence Viewer  
  XP_038329918 (Get FASTA)   NCBI Sequence Viewer  
  XP_038329919 (Get FASTA)   NCBI Sequence Viewer  
  XP_038329920 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354002 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354007 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354011 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354013 (Get FASTA)   NCBI Sequence Viewer  
  XP_038354015 (Get FASTA)   NCBI Sequence Viewer  
  XP_038391012 (Get FASTA)   NCBI Sequence Viewer  
  XP_038391013 (Get FASTA)   NCBI Sequence Viewer  
  XP_038391014 (Get FASTA)   NCBI Sequence Viewer  
  XP_038391015 (Get FASTA)   NCBI Sequence Viewer  
  XP_038391016 (Get FASTA)   NCBI Sequence Viewer  
  XP_038455308 (Get FASTA)   NCBI Sequence Viewer  
  XP_038455309 (Get FASTA)   NCBI Sequence Viewer  
  XP_038455310 (Get FASTA)   NCBI Sequence Viewer  
  XP_038455311 (Get FASTA)   NCBI Sequence Viewer  
  XP_038455312 (Get FASTA)   NCBI Sequence Viewer  
  XP_038519618 (Get FASTA)   NCBI Sequence Viewer  
  XP_038519619 (Get FASTA)   NCBI Sequence Viewer  
  XP_038519620 (Get FASTA)   NCBI Sequence Viewer  
  XP_038519621 (Get FASTA)   NCBI Sequence Viewer  
  XP_038519622 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000027104.4
  ENSCAFP00000041232.3
  ENSCAFP00000046436.1
  ENSCAFP00000052526.2
  ENSCAFP00000055715.1
  ENSCAFP00000055864.2
  ENSCAFP00000068800.1
  ENSCAFP00030001778.1
  ENSCAFP00030001796.1
  ENSCAFP00030001801.1
  ENSCAFP00030001808.1
  ENSCAFP00030001815.1
  ENSCAFP00845014726
  ENSCAFP00845014726.1
  ENSCAFP00845014768.1
  ENSCAFP00845014809.1
  ENSCAFP00845014833
  ENSCAFP00845014833.1
  ENSCAFP00845014855
  ENSCAFP00845014855.1
  ENSCAFP00845014988
  ENSCAFP00845014988.1
  ENSCAFP00845015013.1
Ensembl Acc Id: ENSCAFP00000041232   ⟸   ENSCAFT00000048142
Ensembl Acc Id: ENSCAFP00000055715   ⟸   ENSCAFT00000073692
Ensembl Acc Id: ENSCAFP00000052526   ⟸   ENSCAFT00000083351
Ensembl Acc Id: ENSCAFP00000027104   ⟸   ENSCAFT00000029146
Ensembl Acc Id: ENSCAFP00000055864   ⟸   ENSCAFT00000078022
Ensembl Acc Id: ENSCAFP00000046436   ⟸   ENSCAFT00000092195
RefSeq Acc Id: XP_038329918   ⟸   XM_038473990
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038329920   ⟸   XM_038473992
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038329916   ⟸   XM_038473988
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038329919   ⟸   XM_038473991
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038329917   ⟸   XM_038473989
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038455310   ⟸   XM_038599382
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038455312   ⟸   XM_038599384
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038455308   ⟸   XM_038599380
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038455311   ⟸   XM_038599383
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038455309   ⟸   XM_038599381
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038519620   ⟸   XM_038663692
- Peptide Label: isoform X2
- UniProtKB: A0A8I3RVZ5 (UniProtKB/TrEMBL),   A0A8P0T510 (UniProtKB/TrEMBL),   A0A8I3NIS3 (UniProtKB/TrEMBL),   A0A8P0T808 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038519622   ⟸   XM_038663694
- Peptide Label: isoform X4
- UniProtKB: A0A8C0LU90 (UniProtKB/TrEMBL),   A0A8C0LZE5 (UniProtKB/TrEMBL),   A0A8I3NSA7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038519618   ⟸   XM_038663690
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RA13 (UniProtKB/TrEMBL),   A0A8I3N6U6 (UniProtKB/TrEMBL),   A0A8C0LHU7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038519621   ⟸   XM_038663693
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LUB9 (UniProtKB/TrEMBL),   A0A8I3N755 (UniProtKB/TrEMBL),   A0A8C0LHU7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038519619   ⟸   XM_038663691
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RA13 (UniProtKB/TrEMBL),   A0A8I3N6U6 (UniProtKB/TrEMBL),   A0A8C0LHU7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038354011   ⟸   XM_038498083
- Peptide Label: isoform X2
- UniProtKB: A0A8I3RVZ5 (UniProtKB/TrEMBL),   A0A8P0T510 (UniProtKB/TrEMBL),   A0A8I3NIS3 (UniProtKB/TrEMBL),   A0A8P0T808 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038354015   ⟸   XM_038498087
- Peptide Label: isoform X4
- UniProtKB: A0A8C0LU90 (UniProtKB/TrEMBL),   A0A8C0LZE5 (UniProtKB/TrEMBL),   A0A8I3NSA7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038354002   ⟸   XM_038498074
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RA13 (UniProtKB/TrEMBL),   A0A8I3N6U6 (UniProtKB/TrEMBL),   A0A8C0LHU7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038354013   ⟸   XM_038498085
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LUB9 (UniProtKB/TrEMBL),   A0A8I3N755 (UniProtKB/TrEMBL),   A0A8C0LHU7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038354007   ⟸   XM_038498079
- Peptide Label: isoform X1
- UniProtKB: A0A8C0RA13 (UniProtKB/TrEMBL),   A0A8I3N6U6 (UniProtKB/TrEMBL),   A0A8C0LHU7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038391014   ⟸   XM_038535086
- Peptide Label: isoform X2
- UniProtKB: A0A8I3NIS3 (UniProtKB/TrEMBL),   A0A8I3RVZ5 (UniProtKB/TrEMBL),   A0A8P0T510 (UniProtKB/TrEMBL),   A0A8P0T808 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038391016   ⟸   XM_038535088
- Peptide Label: isoform X4
- UniProtKB: A0A8C0LU90 (UniProtKB/TrEMBL),   A0A8C0LZE5 (UniProtKB/TrEMBL),   A0A8I3NSA7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038391012   ⟸   XM_038535084
- Peptide Label: isoform X1
- UniProtKB: A0A8C0LHU7 (UniProtKB/TrEMBL),   A0A8C0RA13 (UniProtKB/TrEMBL),   A0A8I3N6U6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038391015   ⟸   XM_038535087
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LHU7 (UniProtKB/TrEMBL),   A0A8C0LUB9 (UniProtKB/TrEMBL),   A0A8I3N755 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038391013   ⟸   XM_038535085
- Peptide Label: isoform X1
- UniProtKB: A0A8C0LHU7 (UniProtKB/TrEMBL),   A0A8C0RA13 (UniProtKB/TrEMBL),   A0A8I3N6U6 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845014809   ⟸   ENSCAFT00845018952
Ensembl Acc Id: ENSCAFP00845014726   ⟸   ENSCAFT00845018857
Ensembl Acc Id: ENSCAFP00845014768   ⟸   ENSCAFT00845018902
Ensembl Acc Id: ENSCAFP00845015013   ⟸   ENSCAFT00845019217
Ensembl Acc Id: ENSCAFP00845014988   ⟸   ENSCAFT00845019187
Ensembl Acc Id: ENSCAFP00845014833   ⟸   ENSCAFT00845018988
Ensembl Acc Id: ENSCAFP00845014855   ⟸   ENSCAFT00845019014
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000018345 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030001153 UniProtKB/TrEMBL
  ENSCAFG00845010692 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000029146.6 UniProtKB/TrEMBL
  ENSCAFT00000048142.3 UniProtKB/TrEMBL
  ENSCAFT00000073692.2 UniProtKB/TrEMBL
  ENSCAFT00000078022.2 UniProtKB/TrEMBL
  ENSCAFT00000083351.2 UniProtKB/TrEMBL
  ENSCAFT00000092195.2 UniProtKB/TrEMBL
  ENSCAFT00000102054.1 UniProtKB/TrEMBL
  ENSCAFT00030002008.1 UniProtKB/TrEMBL
  ENSCAFT00030002027.1 UniProtKB/TrEMBL
  ENSCAFT00030002032.1 UniProtKB/TrEMBL
  ENSCAFT00030002041.1 UniProtKB/TrEMBL
  ENSCAFT00030002048.1 UniProtKB/TrEMBL
  ENSCAFT00845018857 ENTREZGENE
  ENSCAFT00845018857.1 UniProtKB/TrEMBL
  ENSCAFT00845018902.1 UniProtKB/TrEMBL
  ENSCAFT00845018952.1 UniProtKB/TrEMBL
  ENSCAFT00845018988 ENTREZGENE
  ENSCAFT00845018988.1 UniProtKB/TrEMBL
  ENSCAFT00845019014 ENTREZGENE
  ENSCAFT00845019014.1 UniProtKB/TrEMBL
  ENSCAFT00845019187 ENTREZGENE
  ENSCAFT00845019187.1 UniProtKB/TrEMBL
  ENSCAFT00845019217.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro 5HT4_rcpt UniProtKB/TrEMBL
  GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
NCBI Gene HTR4 ENTREZGENE
PANTHER 5-HYDROXYTRYPTAMINE RECEPTOR UniProtKB/TrEMBL
  5-HYDROXYTRYPTAMINE RECEPTOR 4 UniProtKB/TrEMBL
  5-HYDROXYTRYPTAMINE RECEPTOR 4 UniProtKB/TrEMBL
  ADRENERGIC RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS 5HT4RECEPTR UniProtKB/TrEMBL
  GPCRRHODOPSN UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
SMART 7TM_GPCR_Srsx UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A8C0LHU7 ENTREZGENE
  A0A8C0LU90 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0LUB9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0LZE5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RA11_CANLF UniProtKB/TrEMBL
  A0A8C0RA13 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3N6U6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3N755 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NAZ6_CANLF UniProtKB/TrEMBL
  A0A8I3NIS3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NS87_CANLF UniProtKB/TrEMBL
  A0A8I3NSA7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3RVZ5 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0T510 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0T808 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0TKP1_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:41831 ENTREZGENE