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Gene: GPANK1 (G-patch domain and ankyrin repeats 1) Canis lupus familiaris

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Symbol:

GPANK1

Name:

G-patch domain and ankyrin repeats 1

RGD ID:

12401627

Description:

ENCODES a protein that exhibits nucleic acid binding (inferred); ASSOCIATED WITH megacolon (ortholog); proteasome-associated autoinflammatory syndrome 1 (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

BAT4; G patch domain and ankyrin repeat-containing protein 1; HLA-B associated transcript 4

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	1,146,339 - 1,150,055 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	1,146,376 - 1,148,566 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	1,282,514 - 1,286,281 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	1,291,309 - 1,295,074 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	1,291,346 - 1,293,551 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	1,150,647 - 1,153,990 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	1,217,914 - 1,221,677 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	1,284,990 - 1,288,754 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
GPANK1	Dog	megacolon		ISO	RGD:1321766	8554872	ClinVar Annotator: match by term: Megacolon	ClinVar	PMID:21681106
GPANK1	Dog	proteasome-associated autoinflammatory syndrome 1		ISO	RGD:1321766	8554872	ClinVar Annotator: match by term: Proteasome-associated autoinflammatory syndrome 1	ClinVar	PMID:28492532

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
GPANK1	Dog	nucleic acid binding	enables	IEA	InterPro:IPR000467	150520179		InterPro	GO_REF:0000002
GPANK1	Dog	protein binding	enables	ISO	PR:Q61937	9068941	PMID:15596447	MGI	PMID:15596447
GPANK1	Dog	protein binding	enables	ISO	UniProtKB:Q6DKK2	9068941	PMID:28514442, PMID:33961781	IntAct	PMID:28514442\|PMID:33961781
GPANK1	Dog	protein binding	enables	ISO	UniProtKB:O60333-2\|UniProtKB:O76024\|UniProtKB:P04792\|UniProtKB:Q96CV9\|UniProtKB:Q9Y3C5	9068941	PMID:32814053	IntAct	PMID:32814053
GPANK1	Dog	protein binding	enables	ISO	UniProtKB:P14373\|UniProtKB:P36406\|UniProtKB:Q08379\|UniProtKB:Q12800\|UniProtKB:Q52MB2\|UniProtKB:Q8ND90	9068941	PMID:25416956	IntAct	PMID:25416956
GPANK1	Dog	protein binding	enables	ISO	UniProtKB:A2RRN7\|UniProtKB:A6NEM1\|UniProtKB:A6ZKI3\|UniProtKB:A8MQ03\|UniProtKB:A8MTA8-2\|UniProtKB:G4XUV3\|UniProtKB:O43143\|UniProtKB:O43281-2\|UniProtKB:O43482\|UniProtKB:O60504\|UniProtKB:O75031\|UniProtKB:O95429\|UniProtKB:O95678\|UniProtKB:O95751\|UniProtKB:P0C7X2\|UniProtKB:P14373\|UniProtKB:P26367\|UniProtKB:P31943\|UniProtKB:P36406\|UniProtKB:P40199\|UniProtKB:P50221\|UniProtKB:P59991\|UniProtKB:P60410\|UniProtKB:P60510\|UniProtKB:P61758\|UniProtKB:P63010-2\|UniProtKB:Q03431\|UniProtKB:Q05516\|UniProtKB:Q08117-2\|UniProtKB:Q10567-3\|UniProtKB:Q12933\|UniProtKB:Q13133-3\|UniProtKB:Q13190\|UniProtKB:Q16610\|UniProtKB:Q1MX18\|UniProtKB:Q3LI70\|UniProtKB:Q3LI72\|UniProtKB:Q3SY46\|UniProtKB:Q52MB2\|UniProtKB:Q5W5X9-3\|UniProtKB:Q63ZY3\|UniProtKB:Q6DKK2\|UniProtKB:Q6FHY5\|UniProtKB:Q6IA69\|UniProtKB:Q6PF18\|UniProtKB:Q6PI77\|UniProtKB:Q7L273\|UniProtKB:Q86WV8\|UniProtKB:Q8IWT0-2\|UniProtKB:Q8N6F8\|UniProtKB:Q8NI38\|UniProtKB:Q8TCB7\|UniProtKB:Q8WTU0\|UniProtKB:Q96A72\|UniProtKB:Q96EL1\|UniProtKB:Q96N21\|UniProtKB:Q99471\|UniProtKB:Q99750\|UniProtKB:Q9BRK4\|UniProtKB:Q9BXJ5\|UniProtKB:Q9BYU1\|UniProtKB:Q9C0B1-2\|UniProtKB:Q9H079\|UniProtKB:Q9HBE1-4\|UniProtKB:Q9HDD0\|UniProtKB:Q9NQX0\|UniProtKB:Q9NRI5-2\|UniProtKB:Q9NYB9-2\|UniProtKB:Q9NYG5-2\|UniProtKB:Q9NZ72\|UniProtKB:Q9UDW3\|UniProtKB:Q9UFD9\|UniProtKB:Q9UGI0\|UniProtKB:Q9UJV3-2\|UniProtKB:Q9UL33-2\|UniProtKB:Q9ULX6\|UniProtKB:Q9UM82\|UniProtKB:Q9Y5V3	9068941	PMID:32296183	IntAct	PMID:32296183
GPANK1	Dog	protein binding	enables	ISO	UniProtKB:Q9BRK4	9068941	PMID:21516116	IntAct	PMID:21516116
GPANK1	Dog	protein binding	enables	ISO	UniProtKB:P14373\|UniProtKB:P36406\|UniProtKB:Q08379\|UniProtKB:Q8ND90	9068941	PMID:31515488	IntAct	PMID:31515488

PMID:22301074

GPANK1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	12	1,146,339 - 1,150,055 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	12	1,146,376 - 1,148,566 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	12	1,282,514 - 1,286,281 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	12	1,291,309 - 1,295,074 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	12	1,291,346 - 1,293,551 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	12	1,150,647 - 1,153,990 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	12	1,217,914 - 1,221,677 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	12	1,284,990 - 1,288,754 (-)	NCBI		UU_Cfam_GSD_1.0

GPANK1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	31,661,228 - 31,666,283 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	31,661,228 - 31,666,283 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	31,629,005 - 31,634,060 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	31,737,841 - 31,741,142 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	31,737,841 - 31,741,142	NCBI
Celera	6	33,228,083 - 33,231,384 (-)	NCBI		Celera
Cytogenetic Map	6	p21.33	NCBI
HuRef	6	31,415,231 - 31,420,285 (-)	NCBI		HuRef
CHM1_1	6	31,631,142 - 31,636,196 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	31,514,261 - 31,519,317 (-)	NCBI		T2T-CHM13v2.0

Gpank1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	17	35,340,472 - 35,343,791 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	17	35,340,431 - 35,343,790 (+)	Ensembl		GRCm39 Ensembl
GRCm38	17	35,121,448 - 35,124,815 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	17	35,121,455 - 35,124,814 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	17	35,258,441 - 35,261,760 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	17	34,731,008 - 34,732,862 (+)	NCBI		MGSCv36	mm8
Celera	17	38,218,446 - 38,221,764 (+)	NCBI		Celera
Cytogenetic Map	17	B1	NCBI
cM Map	17	18.59	NCBI

Gpank1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	20	3,702,309 - 3,705,476 (-)	NCBI		GRCr8
mRatBN7.2	20	3,697,641 - 3,700,814 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	20	3,697,641 - 3,700,858 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	20	4,396,611 - 4,399,666 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	20	3,758,669 - 3,761,724 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	20	4,296,557 - 4,299,612 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	20	5,113,232 - 5,116,382 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	20	5,113,339 - 5,116,382 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	20	7,186,483 - 7,189,641 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	20	3,761,295 - 3,764,338 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	20	3,763,020 - 3,763,294 (-)	NCBI
Celera	20	4,324,958 - 4,328,001 (+)	NCBI		Celera
Cytogenetic Map	20	p12	NCBI

Gpank1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955437	207,735 - 211,104 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955437	207,563 - 211,374 (-)	NCBI	ChiLan1.0	ChiLan1.0

GPANK1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	46,139,122 - 46,143,033 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	42,100,639 - 42,104,541 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	31,323,258 - 31,327,461 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	32,213,136 - 32,217,344 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	32,213,136 - 32,217,344 (-)	Ensembl	panpan1.1		panPan2

Gpank1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	35,696,045 - 35,699,317 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936727	1,863,401 - 1,865,118 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936727	1,862,960 - 1,865,299 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

GPANK1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	7	23,777,118 - 23,780,851 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	7	23,777,104 - 23,780,835 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	7	27,471,121 - 27,474,857 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

GPANK1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	17	40,358,652 - 40,362,734 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	17	40,359,961 - 40,362,547 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666044	31,572,930 - 31,577,278 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Gpank1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624754	24,538,634 - 24,545,561 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624754	24,537,770 - 24,541,845 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in GPANK1
38 total Variants

Assembly: CanFam3.1

Chromosome	Start Pos	End Pos	Reference Nucleotide	Variant Nucleotide	Variant Type	Strain	Variant Page
12	1148446	1148447	G	A	snv	Tibetan Mastiff (TM5), Spanish Water Dog (PE002), Chinese indigenous dogs (DQ8)	View more Information
12	1148498	1148499	C	A	snv	European Variation Archive Release 4, European Variation Archive Release 6, Greyhound (GY432)	View more Information
12	1148503	1148504	C	A	snv	Wolf (WO001_895), Jack Russell Terrier (JR0034), Dachshund (DH0117), Australian Terrier (AR001)	View more Information

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10


RefSeq Transcripts	XM_005627150	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038491336	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038553528	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038553529	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038617418	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038617419	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038683003	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038683004	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_538835	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000123	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000357	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000012	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000000927 ⟹ ENSCAFP00000000846

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	12	1,146,376 - 1,148,566 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845020222 ⟹ ENSCAFP00845015853

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	12	1,291,346 - 1,293,551 (-)	Ensembl

RefSeq Acc Id:

XM_005627150 ⟹ XP_005627207

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	12	1,146,339 - 1,149,312 (-)	NCBI
Dog10K_Boxer_Tasha	12	1,282,514 - 1,285,862 (-)	NCBI

Sequence:

show sequence

AAGTAGGACCCCAACCGACAGAGCCTCTGTCCTCGCGCTGCCTGGGCACGTGGCATCCTGGAGGGTCCCACCGTGCGAAGGCTCAGCCTGGCGCTTCGCACACGCCCGCACCCTCAAGTTCTGCTTTG
TGGTGGTTGATTTTTTTTTCAGTCACACATGTGTGTCTGGGTCGTGTGGCTATTGGACTGGCAGCACCTTTGCTTAGATAAAATTTTTGTGGTACAGAGACCCTGTGGGGTCTCCACAGAGACTGGAG
TTTCTCCCCCAAATCTTCTTCTTGCATCCGGAGAAGGTTAAAAGTCTGTTTTTGTTTGGAAAGACCCTACCCTGACATAGGATCAAGGAAGATTTAAAGGGCTAGGCTGATTGTTTTCTTAACTGCAC
GTCTTACCTGGTGATCAAGTAGTTTGAGAGAGAAGCTGTTTTTACTTATTGTTCTCCCAAAAGCCATGTCCAGGCCCTCCCTCATCACCTTCACCCCGGCCACCAACCCCAGTGACCTCTGGAAAGAT
GGGCAGCAGCAGTCACAGCCTGAAGAGCTGGAGCCCACCCTGAATGGGGCTGCAGCCCGGGCTTTCTATGAGGCCCTGATTGCAGAAGAGAGCAGCATCCCTGCATCCCAGAGATCTCAGCCTGAACC
TGACAGGAAAAGAAAGAGGAAGAAGAGAAGAATGATGGGGGAAGCTGCTGTAGGAGCCTCAGCAGGACATGGACAAAGGAGATCCCTTGAGGCAGAGGACAAGATGACCCATTGGATACTGAGGGCAG
CCCAGGAGGGTGACCTAGCAGAACTAAGAAGGCTCTTGGATCCCCACGAGGCAGGGGGAGCGGGGGGCAATATCAATGCTCGGGATGCCTTCTGGTGGACCCCCCTGATGTGTGCTGCTCGAGCAGGC
CAGGGGGCTGCTGTGCGCTATCTCCTGGGCCGTGGAGCTGCCTGGGTGGGTGTCTGTGAGCTGGGTGGCAAGGATGCTGCTCAGCTGGCTGAAGAAGCGGGTTTTCCTGAGGTGGCGCGCATGGTCCG
AGAGAGCCACGGAGAGACGAGGAATCCAGAGAACCGGTCCCAATCCCCTTCCTTCCAGTACTGCGAGACCTGCAATGCTCACTTCCAAGACTCTAATCATTGGACATCCACTGCTCACCTGCTGTCAC
TGCCTCGTGATCTCAGGTCCCCCAACCTGCCCCTTGGGGTGCCCGCCTCCAGCCCAGGCTTTAAGCTGCTGCTGAGGGGAGGCTGGGAGCCTGGAATGGGGCTGGGACCCCGGGGTGAGGGCCGCACC
AACCCCATCCCCACTGTCCTCAAGAGGGACCAGGAAGGATTAGGCTACAGATCGGTGCCCCAACCCCGAGTCACACACTTTCTGGCCCGAGATACTCGGGCCATAGCTGGGAGGGAGAGAGCCCCTCG
GGTGACCACACTGAGCTGGAGAGAGGAGAGAAGGCAGGAGGAGAAAGACAGGGCCTGGGAGTGGGATCTGAGGACATACATGAACCTTGAGTTCTGACCTTGGTAAGGTCTGATCCTGATCTATTGCT
GAAGTCTGAACTTGGACCTAGGCACTTTAGCTTTTACTTCTGGGGGTCTGTCCAGGTTCCAAACACTCAGATTGTAGTCAGTGGGCTCTGCCTTTGGGAGAGAGAAGCTGAGAGCTGAAAAATAAATC
AAATTTCTTCTTTTGTGTTTTA

hide sequence

RefSeq Acc Id:

XM_038491336 ⟹ XP_038347264

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	12	1,150,647 - 1,153,990 (-)	NCBI

RefSeq Acc Id:

XM_038553528 ⟹ XP_038409456

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	12	1,284,990 - 1,288,754 (-)	NCBI

RefSeq Acc Id:

XM_038553529 ⟹ XP_038409457

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	12	1,284,990 - 1,288,335 (-)	NCBI

RefSeq Acc Id:

XM_038617418 ⟹ XP_038473346

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	12	1,217,914 - 1,221,677 (-)	NCBI

RefSeq Acc Id:

XM_038617419 ⟹ XP_038473347

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	12	1,217,914 - 1,221,258 (-)	NCBI

RefSeq Acc Id:

XM_038683003 ⟹ XP_038538931

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	12	1,291,309 - 1,295,074 (-)	NCBI

RefSeq Acc Id:

XM_038683004 ⟹ XP_038538932

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	12	1,291,309 - 1,294,655 (-)	NCBI

RefSeq Acc Id:

XM_538835 ⟹ XP_538835

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	12	1,146,339 - 1,150,055 (-)	NCBI
Dog10K_Boxer_Tasha	12	1,282,514 - 1,286,281 (-)	NCBI

Sequence:

show sequence

CGCGAGGCCCAGGAACAAGACGCTCGGGGGTGGGGAGCAGCGGGATACCACCGGAAGCGGAAGC
GCAGTACCCCGTTCTGGGCCAGGGAGTATGGGAAATAGAGTCGTAGGGTCGCGCAACTGAGGGGCCGGGAGGGGGCGGGGAAGGAACGGGGCTGGAGGGCTGGATTCCTGCAACTCCCCTCACACAGC
GAGGCTCTGCCCCAGGTGTTTGCCGGCAGCCCAGGGTGCTGACCTCGTCCCCGACTACCCCACCGGGTCCTTGTTGCCTGCGGAGCCTCTCGCCAGAGTCAGGCCCGCCACTGGAGGCCCCACCCGGG
CCGGTGCTTCACCCCGGGGTCTAGTCTCCTCAGGCGGGAGTTCTCCCAAAAGCCATGTCCAGGCCCTCCCTCATCACCTTCACCCCGGCCACCAACCCCAGTGACCTCTGGAAAGATGGGCAGCAGCA
GTCACAGCCTGAAGAGCTGGAGCCCACCCTGAATGGGGCTGCAGCCCGGGCTTTCTATGAGGCCCTGATTGCAGAAGAGAGCAGCATCCCTGCATCCCAGAGATCTCAGCCTGAACCTGACAGGAAAA
GAAAGAGGAAGAAGAGAAGAATGATGGGGGAAGCTGCTGTAGGAGCCTCAGCAGGACATGGACAAAGGAGATCCCTTGAGGCAGAGGACAAGATGACCCATTGGATACTGAGGGCAGCCCAGGAGGGT
GACCTAGCAGAACTAAGAAGGCTCTTGGATCCCCACGAGGCAGGGGGAGCGGGGGGCAATATCAATGCTCGGGATGCCTTCTGGTGGACCCCCCTGATGTGTGCTGCTCGAGCAGGCCAGGGGGCTGC
TGTGCGCTATCTCCTGGGCCGTGGAGCTGCCTGGGTGGGTGTCTGTGAGCTGGGTGGCAAGGATGCTGCTCAGCTGGCTGAAGAAGCGGGTTTTCCTGAGGTGGCGCGCATGGTCCGAGAGAGCCACG
GAGAGACGAGGAATCCAGAGAACCGGTCCCAATCCCCTTCCTTCCAGTACTGCGAGACCTGCAATGCTCACTTCCAAGACTCTAATCATTGGACATCCACTGCTCACCTGCTGTCACTGCCTCGTGAT
CTCAGGTCCCCCAACCTGCCCCTTGGGGTGCCCGCCTCCAGCCCAGGCTTTAAGCTGCTGCTGAGGGGAGGCTGGGAGCCTGGAATGGGGCTGGGACCCCGGGGTGAGGGCCGCACCAACCCCATCCC
CACTGTCCTCAAGAGGGACCAGGAAGGATTAGGCTACAGATCGGTGCCCCAACCCCGAGTCACACACTTTCTGGCCCGAGATACTCGGGCCATAGCTGGGAGGGAGAGAGCCCCTCGGGTGACCACAC
TGAGCTGGAGAGAGGAGAGAAGGCAGGAGGAGAAAGACAGGGCCTGGGAGTGGGATCTGAGGACATACATGAACCTTGAGTTCTGACCTTGGTAAGGTCTGATCCTGATCTATTGCTGAAGTCTGAAC
TTGGACCTAGGCACTTTAGCTTTTACTTCTGGGGGTCTGTCCAGGTTCCAAACACTCAGATTGTAGTCAGTGGGCTCTGCCTTTGGGAGAGAGAAGCTGAGAGCTGAAAAATAAATCAAATTTCTTCT
TTTGTGTTTTA

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Protein RefSeqs	XP_005627207	(Get FASTA)	NCBI Sequence Viewer
	XP_038347264	(Get FASTA)	NCBI Sequence Viewer
	XP_038409456	(Get FASTA)	NCBI Sequence Viewer
	XP_038409457	(Get FASTA)	NCBI Sequence Viewer
	XP_038473346	(Get FASTA)	NCBI Sequence Viewer
	XP_038473347	(Get FASTA)	NCBI Sequence Viewer
	XP_038538931	(Get FASTA)	NCBI Sequence Viewer
	XP_038538932	(Get FASTA)	NCBI Sequence Viewer
	XP_538835	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000000846.3
	ENSCAFP00030007237.1
	ENSCAFP00040016911.1
	ENSCAFP00845015853
	ENSCAFP00845015853.1

RefSeq Acc Id:

XP_538835 ⟸ XM_538835

- UniProtKB:

A0A8C0LB90 (UniProtKB/TrEMBL), A0A8C0MAK7 (UniProtKB/TrEMBL), A0A8I3RWH4 (UniProtKB/TrEMBL), A0A8C0S7I4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSRPSLITFTPATNPSDLWKDGQQQSQPEELEPTLNGAAARAFYEALIAEESSIPASQRSQPEPDRKRKRKKRRMMGEAAVGASAGHGQRRSLEAEDKMTHWILRAAQEGDLAELRRLLDPHEAGGAG
GNINARDAFWWTPLMCAARAGQGAAVRYLLGRGAAWVGVCELGGKDAAQLAEEAGFPEVARMVRESHGETRNPENRSQSPSFQYCETCNAHFQDSNHWTSTAHLLSLPRDLRSPNLPLGVPASSPGFK
LLLRGGWEPGMGLGPRGEGRTNPIPTVLKRDQEGLGYRSVPQPRVTHFLARDTRAIAGRERAPRVTTLSWREERRQEEKDRAWEWDLRTYMNLEF

hide sequence

RefSeq Acc Id:

XP_005627207 ⟸ XM_005627150

- UniProtKB:

A0A8C0LB90 (UniProtKB/TrEMBL), A0A8C0MAK7 (UniProtKB/TrEMBL), A0A8I3RWH4 (UniProtKB/TrEMBL), A0A8C0S7I4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MSRPSLITFTPATNPSDLWKDGQQQSQPEELEPTLNGAAARAFYEALIAEESSIPASQRSQPEPDRKRKRKKRRMMGEAAVGASAGHGQRRSLEAEDKMTHWILRAAQEGDLAELRRLLDPHEAGGAG
GNINARDAFWWTPLMCAARAGQGAAVRYLLGRGAAWVGVCELGGKDAAQLAEEAGFPEVARMVRESHGETRNPENRSQSPSFQYCETCNAHFQDSNHWTSTAHLLSLPRDLRSPNLPLGVPASSPGFK
LLLRGGWEPGMGLGPRGEGRTNPIPTVLKRDQEGLGYRSVPQPRVTHFLARDTRAIAGRERAPRVTTLSWREERRQEEKDRAWEWDLRTYMNLEF

hide sequence

Ensembl Acc Id:

ENSCAFP00000000846 ⟸ ENSCAFT00000000927

RefSeq Acc Id:

XP_038347264 ⟸ XM_038491336

RefSeq Acc Id:

XP_038473346 ⟸ XM_038617418

Protein Domains

G-patch

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000000601	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030004488	UniProtKB/TrEMBL
	ENSCAFG00040010495	UniProtKB/TrEMBL
	ENSCAFG00845011410	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000000927.5	UniProtKB/TrEMBL
	ENSCAFT00030008241.1	UniProtKB/TrEMBL
	ENSCAFT00040019480.1	UniProtKB/TrEMBL
	ENSCAFT00845020222	ENTREZGENE
	ENSCAFT00845020222.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.20	UniProtKB/TrEMBL
InterPro	Ankyrin_rpt	UniProtKB/TrEMBL
	Ankyrin_rpt-contain_sf	UniProtKB/TrEMBL
	G_patch_dom	UniProtKB/TrEMBL
	GPANK1	UniProtKB/TrEMBL
KEGG Report	cfa:481714	UniProtKB/TrEMBL
NCBI Gene	GPANK1	ENTREZGENE
PANTHER	G PATCH DOMAIN AND ANKYRIN REPEAT-CONTAINING PROTEIN 1	UniProtKB/TrEMBL
	PTHR20923	UniProtKB/TrEMBL
Pfam	Ank_4	UniProtKB/TrEMBL
	G-patch	UniProtKB/TrEMBL
PROSITE	G_PATCH	UniProtKB/TrEMBL
SMART	G_patch	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48403	UniProtKB/TrEMBL
UniProt	A0A8C0LB90	ENTREZGENE
	A0A8C0MAK7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0S7I4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3RWH4	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:41361	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar