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Gene: EIF3M (eukaryotic translation initiation factor 3 subunit M) Canis lupus familiaris

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Symbol:

EIF3M

Name:

eukaryotic translation initiation factor 3 subunit M

RGD ID:

12394506

Description:

ENCODES a protein that exhibits translation initiation factor activity (inferred); translation initiation factor binding (inferred); INVOLVED IN cytoplasmic translational initiation (inferred); formation of cytoplasmic translation initiation complex (inferred); translation (inferred); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH intellectual disability (ortholog); FOUND IN cytoplasm (inferred); eukaryotic 43S preinitiation complex (inferred); eukaryotic 48S preinitiation complex (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

PCI domain containing 1 (herpesvirus entry mediator); PCID1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	34,944,181 - 35,036,686 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	34,944,181 - 35,033,541 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	34,558,412 - 34,583,117 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	35,555,348 - 35,580,077 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	35,550,252 - 35,579,999 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	35,126,209 - 35,150,910 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	34,706,619 - 34,731,340 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	35,342,246 - 35,366,933 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
EIF3M	Dog	intellectual disability		ISO	RGD:1607072	8554872	ClinVar Annotator: match by term: Intellectual disability	ClinVar

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
EIF3M	Dog	cytoplasmic translational initiation	involved_in	IEA	UniRule:UR000107134	150520179		UniProt	GO_REF:0000104
EIF3M	Dog	cytoplasmic translational initiation	involved_in	IBA	PANTHER:PTN000394291\|PomBase:SPAC1751.03	150520179		GO_Central	GO_REF:0000033
EIF3M	Dog	formation of cytoplasmic translation initiation complex	involved_in	IEA	UniRule:UR000107134	150520179		UniProt	GO_REF:0000104
EIF3M	Dog	translation	involved_in	IEA	UniProtKB-KW:KW-0648	150520179		UniProt	GO_REF:0000043
EIF3M	Dog	translation	acts_upstream_of_or_within	IEA	UniProtKB:Q99JX4\|ensembl:ENSMUSP00000028592	150520179		Ensembl	GO_REF:0000107
EIF3M	Dog	translational initiation	involved_in	IEA	UniProtKB-KW:KW-0396	150520179		UniProt	GO_REF:0000043

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
EIF3M	Dog	cytoplasm	located_in	IEA	InterPro:IPR027528	150520179		InterPro	GO_REF:0000002
EIF3M	Dog	cytoplasm	located_in	IEA	UniProtKB-KW:KW-0963	150520179		UniProt	GO_REF:0000043
EIF3M	Dog	cytoplasm	located_in	IEA	UniProtKB-SubCell:SL-0086	150520179		UniProt	GO_REF:0000044
EIF3M	Dog	cytoplasm	located_in	IEA	UniRule:UR000107134	150520179		UniProt	GO_REF:0000104
EIF3M	Dog	eukaryotic 43S preinitiation complex	part_of	IEA	UniRule:UR000107134	150520179		UniProt	GO_REF:0000104
EIF3M	Dog	eukaryotic 48S preinitiation complex	part_of	IEA	UniRule:UR000107134	150520179		UniProt	GO_REF:0000104
EIF3M	Dog	eukaryotic translation initiation factor 3 complex	part_of	IEA	InterPro:IPR027528	150520179		InterPro	GO_REF:0000002
EIF3M	Dog	eukaryotic translation initiation factor 3 complex	part_of	IBA	MGI:1351744\|PANTHER:PTN000394291\|PomBase:SPAC1751.03\|UniProtKB:Q7L2H7	150520179		GO_Central	GO_REF:0000033
EIF3M	Dog	eukaryotic translation initiation factor 3 complex	part_of	IEA	UniProtKB:Q7L2H7\|ensembl:ENSP00000436049	150520179		Ensembl	GO_REF:0000107
EIF3M	Dog	eukaryotic translation initiation factor 3 complex, eIF3m	part_of	IEA	UniRule:UR000107134	150520179		UniProt	GO_REF:0000104
EIF3M	Dog	eukaryotic translation initiation factor 3 complex, eIF3m	part_of	IEA	UniProtKB:Q99JX4\|ensembl:ENSMUSP00000028592	150520179		Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
EIF3M	Dog	protein binding	enables	ISO	UniProtKB:Q9Q2G4	9068941	PMID:22190034	IntAct	PMID:22190034
EIF3M	Dog	protein binding	enables	ISO	UniProtKB:O00303\|UniProtKB:O15372\|UniProtKB:P55884	9068941	PMID:18599441	IntAct	PMID:18599441
EIF3M	Dog	protein binding	enables	ISO	UniProtKB:O15372	9068941	PMID:19615732	IntAct	PMID:19615732
EIF3M	Dog	protein binding	enables	ISO	UniProtKB:O00303\|UniProtKB:P55884	9068941	PMID:18599441	UniProt	PMID:18599441
EIF3M	Dog	protein binding	enables	ISO	UniProtKB:O00303\|UniProtKB:O15372	9068941	PMID:23623729, PMID:28514442	IntAct	PMID:23623729\|PMID:28514442
EIF3M	Dog	protein binding	enables	ISO	UniProtKB:O00303	9068941	PMID:16169070, PMID:19748344, PMID:25416956	IntAct	PMID:16169070\|PMID:19748344\|PMID:25416956
EIF3M	Dog	protein binding	enables	ISO	UniProtKB:O00303\|UniProtKB:O75800\|UniProtKB:Q6ZMS7-2\|UniProtKB:Q8N7C3\|UniProtKB:Q9P2A4	9068941	PMID:32296183	IntAct	PMID:32296183
EIF3M	Dog	protein binding	enables	ISO	UniProtKB:O15372\|UniProtKB:P55884	9068941	PMID:35271311	IntAct	PMID:35271311
EIF3M	Dog	protein binding	enables	ISO	UniProtKB:O00303\|UniProtKB:O15372\|UniProtKB:P55884\|UniProtKB:Q7RTV2	9068941	PMID:33961781	IntAct	PMID:33961781
EIF3M	Dog	translation initiation factor activity	enables	IEA	InterPro:IPR027528	150520179		InterPro	GO_REF:0000002
EIF3M	Dog	translation initiation factor activity	contributes_to	IEA	UniProtKB:Q7L2H7\|ensembl:ENSP00000436049	150520179		Ensembl	GO_REF:0000107
EIF3M	Dog	translation initiation factor activity	enables	IEA	UniProtKB-KW:KW-0396	150520179		UniProt	GO_REF:0000043
EIF3M	Dog	translation initiation factor activity	enables	IEA	UniRule:UR000107134	150520179		UniProt	GO_REF:0000104
EIF3M	Dog	translation initiation factor binding	enables	IEA	UniProtKB:Q99JX4\|ensembl:ENSMUSP00000028592	150520179		Ensembl	GO_REF:0000107

RGD Manual Annotations

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
EIF3M	Dog	translation initiation pathway		ISO	RGD:1607072	9068941		RGD	PMID:24499181\|REF_RGD_ID:10002776

PMID:22301074	PMID:30032202

EIF3M
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	34,944,181 - 35,036,686 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	34,944,181 - 35,033,541 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	34,558,412 - 34,583,117 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	35,555,348 - 35,580,077 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	35,550,252 - 35,579,999 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	35,126,209 - 35,150,910 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	34,706,619 - 34,731,340 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	35,342,246 - 35,366,933 (-)	NCBI		UU_Cfam_GSD_1.0

EIF3M
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	32,583,831 - 32,606,264 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	32,583,798 - 32,606,264 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	32,605,377 - 32,627,810 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	32,561,967 - 32,580,595 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	11	32,752,144 - 32,770,766 (+)	NCBI		Celera
Cytogenetic Map	11	p13	NCBI
HuRef	11	32,299,982 - 32,318,710 (+)	NCBI		HuRef
CHM1_1	11	32,605,368 - 32,624,094 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	11	32,719,345 - 32,741,774 (+)	NCBI		T2T-CHM13v2.0

Eif3m
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	2	104,830,001 - 104,847,372 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	2	104,830,001 - 104,847,425 (-)	Ensembl		GRCm39 Ensembl
GRCm38	2	104,999,656 - 105,017,027 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	2	104,999,656 - 105,017,080 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	2	104,839,813 - 104,857,184 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	2	104,800,495 - 104,817,866 (-)	NCBI		MGSCv36	mm8
Celera	2	106,232,844 - 106,250,618 (-)	NCBI		Celera
Cytogenetic Map	2	E2	NCBI
cM Map	2	55.06	NCBI

Eif3m
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	3	111,879,589 - 111,897,193 (-)	NCBI		GRCr8
mRatBN7.2	3	91,424,754 - 91,442,358 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	3	91,416,325 - 91,442,392 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	3	94,916,720 - 94,934,260 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	3	103,515,667 - 103,533,207 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	3	101,347,071 - 101,364,663 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	3	94,990,086 - 95,007,690 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	3	94,990,068 - 95,007,712 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	3	101,614,557 - 101,632,161 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	3	90,384,185 - 90,401,789 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	3	90,483,293 - 90,500,897 (-)	NCBI		Celera
Cytogenetic Map	3	q33	NCBI

Eif3m
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955476	10,594,670 - 10,614,445 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955476	10,594,670 - 10,612,448 (+)	NCBI	ChiLan1.0	ChiLan1.0

EIF3M
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	34,792,473 - 34,811,242 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	34,796,892 - 34,819,400 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	32,545,655 - 32,568,153 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	32,433,324 - 32,451,829 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	32,433,324 - 32,451,829 (+)	Ensembl	panpan1.1		panPan2

Eif3m
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	32,136,240 - 32,152,880 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936533	5,256,284 - 5,277,728 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936533	5,261,050 - 5,277,675 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EIF3M
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	28,256,591 - 28,282,770 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	28,258,399 - 28,282,812 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	30,748,559 - 30,772,863 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EIF3M
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	32,595,317 - 32,614,648 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	32,595,397 - 32,614,615 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	129,757,017 - 129,776,297 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Eif3m
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624766	21,041,167 - 21,060,039 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624766	21,041,235 - 21,057,430 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in EIF3M
1156 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10


RefSeq Transcripts	XM_005631145	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014121226	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022405355	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022405356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038424176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038424177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038424178	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038424179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038454456	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038500523	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038500524	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038500525	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038500526	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038563101	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038563102	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038563103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038563104	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038627224	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038627225	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038627226	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038627227	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000213	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000011822 ⟹ ENSCAFP00000010960

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	34,944,182 - 34,968,805 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000064907 ⟹ ENSCAFP00000059741

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	34,944,181 - 34,968,770 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000075880 ⟹ ENSCAFP00000065287

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	34,944,182 - 35,033,541 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845047731 ⟹ ENSCAFP00845037454

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	18	35,550,252 - 35,579,925 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845047794 ⟹ ENSCAFP00845037503

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	18	35,552,409 - 35,579,957 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845047902 ⟹ ENSCAFP00845037576

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	18	35,555,351 - 35,579,999 (-)	Ensembl

RefSeq Acc Id:

XM_005631145 ⟹ XP_005631202

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	18	34,944,181 - 34,968,886 (-)	NCBI
Dog10K_Boxer_Tasha	18	34,558,412 - 34,583,117 (-)	NCBI

Sequence:

show sequence

CCCGGAAGCGGTAGTGAGGCCGCCCCCCTCCCCCCCGCCCGCGCGCGCTGCTGCCGCTCTCTTTCCGGTCGGCGTGGTTTTGCGAGCGGAGCGGTCGCCGCGCCCGGGTCTTCGCCATGAGCGTCCCG
GCCTTCATCGACATCAGCGAGGAAGATCAGGCTGCTGAGCTTCGAGCTTATCTGAAATCTAAAGGAGCTGAAATTTCAGAAGAGAACTCAGAAGGTGGACTTCATGTAGATTTAGCTCAAATTATTGA
GGCCTGTGATGTATGTCTGAAAGAAGACGATAAAGATGTTGAAAGTGTGATGAACAGCGTGGTATCCCTCCTGTTGATCCTGGAGCCGGACAAGCAAGAAGCTCTGATTGAAAGCCTATGTGAAAAAC
TGGTCAAATTTCGGGAAGGTGAACGCCCATCTTTGAGACTGCAGTTGCTAAGCAACCTTTTCCATGGGATGGATAAGAATACTCCTGTAAGATATACAGTATATTGCAGCCTCATTAAAGTGGCAGCA
TCTTGTGGGGCCATCCAGTATATTCCAACTGAGCTGGATCAAGTTCGAAAATGGATTTCTGATTGGAACCTCACCACTGAAAAAAAACACACCCTTTTAAGGCTCCTTTATGAGGCACTTGTGGATTG
TAAGAAAAGTGATGCTGCCTCAAAAGTCATGGTAGAGTTGCTAGGAAGTTACACAGAGGACAACGCTTCCCAGGCTCGAGTTGATGCCCACAGGTGTATTGTACGAGCATTGAAAGATCCAAATGCAT
TTCTCTTTGACCATCTTCTCACTTTAAAACCAGTCAAATTTTTGGAAGGCGAGCTTATTCATGATCTTTTAACCATTTTTGTGAGTGCTAAACTGGCATCATATGTCAAGTTTTATCAGAATAATAAA
GACTTCATTGATTCACTTGGTCTATTACATGAACAGAATATGGCAAAAATGAGACTGCTTACTTTCATGGGAATGGCAGTGGAAAATAAAGAAATTTCTTTTGACACAATGCAGCAAGAACTTCAGAT
TGGAGCCGATGATGTTGAAGCATTTGTTATTGATGCAGTAAGAACTAAAATGGTCTACTGCAAAATTGATCAGACCCAGAGGAAAGTAGTTGTCAGTCATAGTACACATCGGACATTTGGAAAACAGC
AGTGGCAGCAACTGTATGACACACTAAATGCCTGGAAACAAAACTTGAACAAAGTGAAAAACAGCCTTTTGAGTCTTTCTGATACATGAATTTTTATGCTATATAAAATTTGGTTCTTTTTGGAAGAA
ATCTAAATCATAGTAAAACAAACTAAAATTTGA

hide sequence

RefSeq Acc Id:

XM_014121226 ⟹ XP_013976701

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	18	34,944,181 - 34,968,525 (-)	NCBI
Dog10K_Boxer_Tasha	18	34,558,412 - 34,582,769 (-)	NCBI

Sequence:

show sequence

TCGGGCGCCGGGCCCGCCGAGGTTTCGCGGCCGGCTTCCTGGTTGGCGTCGCTCTTCCAGGCCG
TGTCACTCCTGGCGACACTACTTTCTGACTGACTGGGGATGGTGTCTGCTTCCGTCTCCCCAGTGCAGCCACATCCGGAGTGGGAGGTGGCGAATCTCCAGACGACGCTGCTGAGCTTCGAGCTTATC
TGAAATCTAAAGGAGCTGAAATTTCAGAAGAGAACTCAGAAGGTGGACTTCATGTAGATTTAGCTCAAATTATTGAGGCCTGTGATGTATGTCTGAAAGAAGACGATAAAGATGTTGAAAGTGTGATG
AACAGCGTGGTATCCCTCCTGTTGATCCTGGAGCCGGACAAGCAAGAAGCTCTGATTGAAAGCCTATGTGAAAAACTGGTCAAATTTCGGGAAGGTGAACGCCCATCTTTGAGACTGCAGTTGCTAAG
CAACCTTTTCCATGGGATGGATAAGAATACTCCTGTAAGATATACAGTATATTGCAGCCTCATTAAAGTGGCAGCATCTTGTGGGGCCATCCAGTATATTCCAACTGAGCTGGATCAAGTTCGAAAAT
GGATTTCTGATTGGAACCTCACCACTGAAAAAAAACACACCCTTTTAAGGCTCCTTTATGAGGCACTTGTGGATTGTAAGAAAAGTGATGCTGCCTCAAAAGTCATGGTAGAGTTGCTAGGAAGTTAC
ACAGAGGACAACGCTTCCCAGGCTCGAGTTGATGCCCACAGGTGTATTGTACGAGCATTGAAAGATCCAAATGCATTTCTCTTTGACCATCTTCTCACTTTAAAACCAGTCAAATTTTTGGAAGGCGA
GCTTATTCATGATCTTTTAACCATTTTTGTGAGTGCTAAACTGGCATCATATGTCAAGTTTTATCAGAATAATAAAGACTTCATTGATTCACTTGGTCTATTACATGAACAGAATATGGCAAAAATGA
GACTGCTTACTTTCATGGGAATGGCAGTGGAAAATAAAGAAATTTCTTTTGACACAATGCAGCAAGAACTTCAGATTGGAGCCGATGATGTTGAAGCATTTGTTATTGATGCAGTAAGAACTAAAATG
GTCTACTGCAAAATTGATCAGACCCAGAGGAAAGTAGTTGTCAGTCATAGTACACATCGGACATTTGGAAAACAGCAGTGGCAGCAACTGTATGACACACTAAATGCCTGGAAACAAAACTTGAACAA
AGTGAAAAACAGCCTTTTGAGTCTTTCTGATACATGAATTTTTATGCTATATAAAATTTGGTTCTTTTTGGAAGAAATCTAAATCATAGTAAAACAAACTAAAATTTGA

hide sequence

RefSeq Acc Id:

XM_022405356 ⟹ XP_022261064

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	18	34,944,181 - 34,969,085 (-)	NCBI
Dog10K_Boxer_Tasha	18	34,558,412 - 34,583,085 (-)	NCBI

Sequence:

show sequence

AGACGCGAGCTCAGCGAAGGACGGCAGGCGACACCGTTCCGGACGATGGAAGCGACAGGCGGAGCCAAGACCCGGCGCCGTCGAGGGCGCCCGTGAGGCCCGCCCACGCGCGTGCGCCCCGCCTTAGC
GCGAGGTGGGATTGGCCCCCCTGGTCCCGCCCATCTTGGTGGCCACGCCCCGCAAGACGGGCGCGGGGTAACCCGGAAGCGGTAGTGAGGCCGCCCCCCTCCCCCCCGCCCGCGCGCGCTGCTGCCGC
TCTCTTTCCGGTCGGCGTGGTTTTGCGAGCGGAGCGGTCGCCGCGCCCGGGTCTTCGCCATGAGCGTCCCGGCCTTCATCGACATCAGCGAGGAAGATCAGATGTTGAAAGTGTGATGAACAGCGTGG
TATCCCTCCTGTTGATCCTGGAGCCGGACAAGCAAGAAGCTCTGATTGAAAGCCTATGTGAAAAACTGGTCAAATTTCGGGAAGGTGAACGCCCATCTTTGAGACTGCAGTTGCTAAGCAACCTTTTC
CATGGGATGGATAAGAATACTCCTGTAAGATATACAGTATATTGCAGCCTCATTAAAGTGGCAGCATCTTGTGGGGCCATCCAGTATATTCCAACTGAGCTGGATCAAGTTCGAAAATGGATTTCTGA
TTGGAACCTCACCACTGAAAAAAAACACACCCTTTTAAGGCTCCTTTATGAGGCACTTGTGGATTGTAAGAAAAGTGATGCTGCCTCAAAAGTCATGGTAGAGTTGCTAGGAAGTTACACAGAGGACA
ACGCTTCCCAGGCTCGAGTTGATGCCCACAGGTGTATTGTACGAGCATTGAAAGATCCAAATGCATTTCTCTTTGACCATCTTCTCACTTTAAAACCAGTCAAATTTTTGGAAGGCGAGCTTATTCAT
GATCTTTTAACCATTTTTGTGAGTGCTAAACTGGCATCATATGTCAAGTTTTATCAGAATAATAAAGACTTCATTGATTCACTTGGTCTATTACATGAACAGAATATGGCAAAAATGAGACTGCTTAC
TTTCATGGGAATGGCAGTGGAAAATAAAGAAATTTCTTTTGACACAATGCAGCAAGAACTTCAGATTGGAGCCGATGATGTTGAAGCATTTGTTATTGATGCAGTAAGAACTAAAATGGTCTACTGCA
AAATTGATCAGACCCAGAGGAAAGTAGTTGTCAGTCATAGTACACATCGGACATTTGGAAAACAGCAGTGGCAGCAACTGTATGACACACTAAATGCCTGGAAACAAAACTTGAACAAAGTGAAAAAC
AGCCTTTTGAGTCTTTCTGATACATGAATTTTTATGCTATATAAAATTTGGTTCTTTTTGGAAGAAATCTAAATCATAGTAAAACAAACTAAAATTTGA

hide sequence

RefSeq Acc Id:

XM_038424176 ⟹ XP_038280104

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	18	35,555,348 - 35,580,041 (-)	NCBI

RefSeq Acc Id:

XM_038424177 ⟹ XP_038280105

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	18	35,555,348 - 35,580,041 (-)	NCBI

RefSeq Acc Id:

XM_038424178 ⟹ XP_038280106

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	18	35,555,348 - 35,579,693 (-)	NCBI

RefSeq Acc Id:

XM_038424179 ⟹ XP_038280107

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	18	35,555,348 - 35,580,077 (-)	NCBI

RefSeq Acc Id:

XM_038454456 ⟹ XP_038310384

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	18	34,558,412 - 34,583,117 (-)	NCBI

RefSeq Acc Id:

XM_038500523 ⟹ XP_038356451

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	18	35,126,209 - 35,150,910 (-)	NCBI

RefSeq Acc Id:

XM_038500524 ⟹ XP_038356452

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	18	35,126,209 - 35,150,910 (-)	NCBI

RefSeq Acc Id:

XM_038500525 ⟹ XP_038356453

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	18	35,126,209 - 35,150,562 (-)	NCBI

RefSeq Acc Id:

XM_038500526 ⟹ XP_038356454

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	18	35,126,209 - 35,150,878 (-)	NCBI

RefSeq Acc Id:

XM_038563101 ⟹ XP_038419029

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	18	35,342,246 - 35,366,933 (-)	NCBI

RefSeq Acc Id:

XM_038563102 ⟹ XP_038419030

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	18	35,342,246 - 35,366,933 (-)	NCBI

RefSeq Acc Id:

XM_038563103 ⟹ XP_038419031

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	18	35,342,246 - 35,366,585 (-)	NCBI

RefSeq Acc Id:

XM_038563104 ⟹ XP_038419032

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	18	35,342,246 - 35,366,901 (-)	NCBI

RefSeq Acc Id:

XM_038627224 ⟹ XP_038483152

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	18	34,706,619 - 34,731,304 (-)	NCBI

RefSeq Acc Id:

XM_038627225 ⟹ XP_038483153

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	18	34,706,619 - 34,731,304 (-)	NCBI

RefSeq Acc Id:

XM_038627226 ⟹ XP_038483154

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	18	34,706,619 - 34,730,956 (-)	NCBI

RefSeq Acc Id:

XM_038627227 ⟹ XP_038483155

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	18	34,706,619 - 34,731,340 (-)	NCBI


Protein RefSeqs	XP_005631202	(Get FASTA)	NCBI Sequence Viewer
	XP_013976701	(Get FASTA)	NCBI Sequence Viewer
	XP_022261064	(Get FASTA)	NCBI Sequence Viewer
	XP_038280104	(Get FASTA)	NCBI Sequence Viewer
	XP_038280105	(Get FASTA)	NCBI Sequence Viewer
	XP_038280106	(Get FASTA)	NCBI Sequence Viewer
	XP_038280107	(Get FASTA)	NCBI Sequence Viewer
	XP_038310384	(Get FASTA)	NCBI Sequence Viewer
	XP_038356451	(Get FASTA)	NCBI Sequence Viewer
	XP_038356452	(Get FASTA)	NCBI Sequence Viewer
	XP_038356453	(Get FASTA)	NCBI Sequence Viewer
	XP_038356454	(Get FASTA)	NCBI Sequence Viewer
	XP_038419029	(Get FASTA)	NCBI Sequence Viewer
	XP_038419030	(Get FASTA)	NCBI Sequence Viewer
	XP_038419031	(Get FASTA)	NCBI Sequence Viewer
	XP_038419032	(Get FASTA)	NCBI Sequence Viewer
	XP_038483152	(Get FASTA)	NCBI Sequence Viewer
	XP_038483153	(Get FASTA)	NCBI Sequence Viewer
	XP_038483154	(Get FASTA)	NCBI Sequence Viewer
	XP_038483155	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000010960.4
	ENSCAFP00000065287.2
	ENSCAFP00000068536.1
	ENSCAFP00030033364.1
	ENSCAFP00030033432.1
	ENSCAFP00040031788.1
	ENSCAFP00040031902.1
	ENSCAFP00845037454.1
	ENSCAFP00845037503
	ENSCAFP00845037503.1
	ENSCAFP00845037576.1

RefSeq Acc Id:	XP_005631202 ⟸ XM_005631145
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0T580 (UniProtKB/TrEMBL), A0A8C0JN32 (UniProtKB/TrEMBL), A0A8I3PRM4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSVPAFIDISEEDQAAELRAYLKSKGAEISEENSEGGLHVDLAQIIEACDVCLKEDDKDVESVMNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLI KVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFY QNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSLLSLSDT hide sequence

RefSeq Acc Id:

XP_013976701 ⟸ XM_014121226

- Peptide Label:

isoform X3

- Sequence:

show sequence

MNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGS
YTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQIGADDVEAFVIDAVRTK
MVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSLLSLSDT

hide sequence

RefSeq Acc Id:

XP_022261064 ⟸ XM_022405356

- Peptide Label:

isoform X3

- Sequence:

show sequence

MNSVVSLLLILEPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSL
IKVAASCGAIQYIPTELDQVRKWISDWNLTTEKKHTLLRLLYEALVDCKKSDAASKVMVELLGSYTEDNASQARVDAHRCIVRALKDPNAFLFDHLLTLKPVKFLEGELIHDLLTIFVSAKLASYVKF
YQNNKDFIDSLGLLHEQNMAKMRLLTFMGMAVENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCKIDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKVKNSLLSLSDT

hide sequence

Ensembl Acc Id:

ENSCAFP00000059741 ⟸ ENSCAFT00000064907

Ensembl Acc Id:

ENSCAFP00000010960 ⟸ ENSCAFT00000011822

Protein Domains

PCI

RGD ID:

13686488

Promoter ID:

EPDNEW_C4556

Type:

multiple initiation site

Name:

EIF3M_1

Description:

eukaryotic translation initiation factor 3 subunit M

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	18	34,968,826 - 34,968,886	EPDNEW

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000007368	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030020762	UniProtKB/TrEMBL
	ENSCAFG00040019700	UniProtKB/TrEMBL
	ENSCAFG00845027029	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000011822.5	UniProtKB/TrEMBL
	ENSCAFT00000075880.2	UniProtKB/TrEMBL
	ENSCAFT00000097848.1	UniProtKB/TrEMBL
	ENSCAFT00030038251.1	UniProtKB/TrEMBL
	ENSCAFT00030038325.1	UniProtKB/TrEMBL
	ENSCAFT00040036505.1	UniProtKB/TrEMBL
	ENSCAFT00040036627.1	UniProtKB/TrEMBL
	ENSCAFT00845047731.1	UniProtKB/TrEMBL
	ENSCAFT00845047794	ENTREZGENE
	ENSCAFT00845047794.1	UniProtKB/TrEMBL
	ENSCAFT00845047902.1	UniProtKB/TrEMBL
InterPro	ARM-type_fold	UniProtKB/TrEMBL
	COPS7/eIF3m	UniProtKB/TrEMBL
	eIF3m	UniProtKB/TrEMBL
	eIF3m_C_helix	UniProtKB/TrEMBL
	PCI_dom	UniProtKB/TrEMBL
	WH_DNA-bd_sf	UniProtKB/TrEMBL
KEGG Report	cfa:475950	UniProtKB/TrEMBL
NCBI Gene	EIF3M	ENTREZGENE
PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT M	UniProtKB/TrEMBL
	PTHR15350	UniProtKB/TrEMBL
Pfam	eIF3m_C_helix	UniProtKB/TrEMBL
	PCI	UniProtKB/TrEMBL
PROSITE	PCI	UniProtKB/TrEMBL
SMART	PINT	UniProtKB/TrEMBL
Superfamily-SCOP	SSF46785	UniProtKB/TrEMBL
	SSF48371	UniProtKB/TrEMBL
UniProt	A0A8C0JN32	ENTREZGENE
	A0A8C0NZ00_CANLF	UniProtKB/TrEMBL
	A0A8C0T580	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PRI3_CANLF	UniProtKB/TrEMBL
	A0A8I3PRM4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PRT8_CANLF	UniProtKB/TrEMBL
	A0A8P0SCV1_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:40279	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar

RGD Manual Annotations