TSEN2 (tRNA splicing endonuclease subunit 2)

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Gene: TSEN2 (tRNA splicing endonuclease subunit 2) Canis lupus familiaris

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Symbol:

TSEN2

Name:

tRNA splicing endonuclease subunit 2

RGD ID:

12345153

Description:

ENCODES a protein that exhibits DNA binding (inferred); DNA-binding transcription factor activity (inferred); lyase activity (inferred); INVOLVED IN intracellular receptor signaling pathway (inferred); regulation of DNA-templated transcription (inferred); regulation of transcription by RNA polymerase II (inferred); PARTICIPATES IN tRNA maturation pathway; ASSOCIATED WITH Deglutition Disorders (ortholog); genetic disease (ortholog); hemolytic-uremic syndrome (ortholog); FOUND IN centrosome (inferred); cytoplasm (inferred); cytosol (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tRNA splicing endonuclease 2 homolog; tRNA-splicing endonuclease subunit Sen2

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	6,031,295 - 6,090,938 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	6,050,357 - 6,207,981 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	6,067,927 - 6,127,172 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	6,060,280 - 6,119,929 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	6,078,684 - 6,119,841 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	5,775,670 - 5,835,307 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	6,129,564 - 6,189,194 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	6,106,273 - 6,164,648 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Deglutition Disorders (ISO)

genetic disease (ISO)

hemolytic-uremic syndrome (ISO)

intellectual disability (ISO)

microcephaly (ISO)

movement disease (ISO)

pontocerebellar hypoplasia (ISO)

pontocerebellar hypoplasia type 1B (ISO)

pontocerebellar hypoplasia type 2B (ISO)

RASopathy (ISO)

Vision Disorders (ISO)

Weight Gain (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

intracellular receptor signaling pathway (IEA)

regulation of DNA-templated transcription (IEA)

regulation of transcription by RNA polymerase II (IEA)

rhythmic process (IEA)

tRNA processing (IEA)

tRNA splicing, via endonucleolytic cleavage and ligation (IEA)

Cellular Component

centrosome (IEA)

cytoplasm (IEA)

cytosol (IEA)

intracellular membrane-bounded organelle (IEA)

nucleoplasm (IEA)

nucleus (IEA)

tRNA-intron endonuclease complex (IEA)

Molecular Function

DNA binding (IEA)

DNA-binding transcription factor activity (IEA)

lyase activity (IEA)

metal ion binding (IEA)

nuclear receptor activity (IEA)

nucleic acid binding (IEA)

protein binding (ISO)

sequence-specific DNA binding (IEA)

tRNA-intron endonuclease activity (IEA)

zinc ion binding (IEA)

Molecular Pathway Annotations Click to see Annotation Detail View

tRNA maturation pathway (ISO)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

TSEN2
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	20	6,031,295 - 6,090,938 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	20	6,050,357 - 6,207,981 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	20	6,067,927 - 6,127,172 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	20	6,060,280 - 6,119,929 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	20	6,078,684 - 6,119,841 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	20	5,775,670 - 5,835,307 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	20	6,129,564 - 6,189,194 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	20	6,106,273 - 6,164,648 (-)	NCBI		UU_Cfam_GSD_1.0

TSEN2
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	3	12,480,231 - 12,539,624 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	3	12,484,421 - 12,541,549 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	3	12,525,979 - 12,581,123 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	3	12,501,028 - 12,549,812 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	3	12,463,261 - 12,512,159 (+)	NCBI		Celera
Cytogenetic Map	3	p25.2	NCBI
HuRef	3	12,458,994 - 12,507,895 (+)	NCBI		HuRef
CHM1_1	3	12,476,015 - 12,524,909 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	3	12,478,037 - 12,537,426 (+)	NCBI		T2T-CHM13v2.0

Tsen2
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	115,521,652 - 115,555,297 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	115,521,625 - 115,555,589 (+)	Ensembl		GRCm39 Ensembl
GRCm38	6	115,544,659 - 115,578,350 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	115,544,664 - 115,578,628 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	115,494,722 - 115,528,354 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	115,510,323 - 115,543,955 (+)	NCBI		MGSCv36	mm8
Celera	6	117,384,279 - 117,417,834 (+)	NCBI		Celera
Cytogenetic Map	6	E3	NCBI
cM Map	6	53.58	NCBI

Tsen2
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	150,275,389 - 150,310,846 (+)	NCBI		GRCr8
mRatBN7.2	4	148,602,805 - 148,638,219 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	148,602,863 - 148,638,215 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	154,827,001 - 154,862,293 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	150,610,088 - 150,645,379 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	149,233,907 - 149,269,200 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	147,455,506 - 147,490,869 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	147,455,533 - 147,490,733 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	210,742,791 - 210,778,839 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	151,672,953 - 151,708,835 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	151,917,793 - 151,953,680 (+)	NCBI
Celera	4	137,494,385 - 137,528,921 (+)	NCBI		Celera
Cytogenetic Map	4	q42	NCBI

Tsen2
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955429	14,969,289 - 14,997,220 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955429	14,970,105 - 14,997,459 (+)	NCBI	ChiLan1.0	ChiLan1.0

TSEN2
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	2	12,471,154 - 12,524,257 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	3	12,475,973 - 12,529,018 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	3	12,410,885 - 12,463,932 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	3	12,754,106 - 12,800,801 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	3	12,759,375 - 12,800,201 (+)	Ensembl	panpan1.1		panPan2

Tsen2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404942	17,714,525 - 17,745,833 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936602	1,164,227 - 1,195,221 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936602	1,163,927 - 1,195,163 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TSEN2
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	13	68,467,860 - 68,520,717 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	13	68,480,708 - 68,520,726 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	13	75,697,087 - 75,737,589 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TSEN2
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	22	48,458,404 - 48,510,420 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	22	48,463,693 - 48,510,123 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666041	117,993,783 - 118,042,002 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tsen2
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624956	22,035 - 46,874 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624956	21,284 - 51,588 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TSEN2
757 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_014121648	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014121649	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_014121651	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038426900	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038426901	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038426902	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038502696	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038502697	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038502698	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038565614	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038565615	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038565616	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038629747	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038629748	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038629749	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_001318374	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002616571	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_002616572	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005297583	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005297584	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005297585	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005312466	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005312467	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005312468	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005340799	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005340800	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005340801	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005374566	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005374567	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005374568	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005408564	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005408565	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XR_005408566	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000232	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000058	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000291	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00845051171 ⟹ ENSCAFP00845040129

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	6,078,684 - 6,119,841 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845051208 ⟹ ENSCAFP00845040162

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	6,078,684 - 6,119,841 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845051236 ⟹ ENSCAFP00845040184

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	6,078,684 - 6,119,841 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845051258 ⟹ ENSCAFP00845040203

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	20	6,082,029 - 6,119,841 (-)	Ensembl

RefSeq Acc Id:

XM_014121648 ⟹ XP_013977123

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	20	6,049,612 - 6,090,938 (-)	NCBI
Dog10K_Boxer_Tasha	20	6,086,283 - 6,127,172 (-)	NCBI

Sequence:

show sequence

CTGCGCATTCGGCCCGGCTTTGCGGCCGCACTGCTTGACGGCAGCAGTCTCCGCCCTCCGGCCG
GCGTTGCCGAGGTAACGACAAGCGCGTGGGGCCGAGAAAGTTACCCCTGAGAAATGGCAGAAGC
AGTTTTCCGTGCCCCAAAGCGGAAAAGAAGAGTATATGAGAGTTTTGAGTCTCCACTGCCCATC
CCTTTTGGTCAAGACTGTGGGCCTAAGCAAGATTTCAAAGTGTTCACAGCAGAGATGATAAACA
ACAATGTAATTGTGAGGAACACAGAAGATATGGAGCAGCTCTATGGGAAAGGTTATTTTGGAAA
AGGTATCCTGTCTAGAAGCCGTCCAAACTTCACAATTTCAGATCCTAAGCTCGTTGCTAAGTGG
AAAGATATGAAGACAGACATGCCTATAATCACGTCAACAAAGTATCAGCATAGTGTAGAATGGG
CCACAAAGCTCATGCAAAGACAGGGGCAGGATGAGAGTACAGTGCGTAAAATCCTCCAGGATTA
CACAAAACCACTTGAGCATTCTGGTATAAAAAGGAATGAAGAAGGTCAGCGGCATGACGAGCTG
AACTCTGGAACAGTTTCCAAAATGGAAGGTACCACAGATAGAGAGGAACTTTCCATGATGAATG
GGGACTCGGGTAAGTCTGTTGGCATGGAGGGTCCCAGCAAGCCATCAGACCACCAGCAGCAGGG
CTCTGGGCCTGACCCACTCACTCCAGATGGCCTGGATGAATCTGTGGTAGAGGGTGCCACACTG
CAACACTGCCCTCTGCCTCAAATTCACTGTGGCAAAGATGATGGTCTCCTCCCCACACCTGGGG
ACACTCAGCCTGGGGACGGGAGCCAGCAAGCAGATCTCTGTGCCAGAAAGAGAGGGCCTGGTGA
TGAGTACGTGCTGGTGGAGGAAGATGTGTATGATGTGAGCGAGCAGGAATGTGCCCCAAATGAA
GAATTGGCACCCAAAAAGAGATTAGTATGCAGAAGAAATCCATATAGGATCTTGGAGTATTTGC
AACTCAGCCTAGAAGAGGCCTTTTTCCTGGTCTATGCTCTAGGATGTCTGAGTATTTATTATGA
GAAGGAGCCCTTAACAATCATGAAGCTCTGGAAAGCTTTCACTGTAGTTCAGCCCACATTCAGG
ACTACATACATGGCATACCATTACTTCCGAAGCAAGGGCTGGGTGCCCAAAGTGGGACTTAAGT
ATGGGACAGATTTACTGTTGTATCGAAAAGGCCCTCCATTTTACCATGCAAGTTACTCTGTCAT
CATCGAGTTAGTCGACGACCATTTTGAGGGCTCTCTTCGCAGACCCTTCAGTTGGAGGTCCCTG
GCTGCCTTGAACAGGGTTTCAGTTAACGTCTCCAAGGAACTCATGCTGTGCTATTTGATTAAAC
CCTCTACCATGACTGACAAAGAGATGGAGTCACCAGAATGTATGAAACAAATCAAAGTTCAGGA
GGTGATTCTAAGCCGCTGGGTTTCTTCAAGAGAGAGGAGTGACCAAGATGAACTTTAACAGTCC
AACCTCAGAACTATGATTTACCAGCAAATACTATTGAGTCTCCTACAGTAAGCCAAGTTCAGTG
TGAGGTAAAGAGTCCTCTTCTATAGCTGTCTGATAATTGAAAACTTTTAAAGGGCATGCCACTC
CCAGCACCAAAAAGTGATTAGTATTTTATAAGATAAAATTACCCAGGAGACAAAAAAGCCCTGT
GCTGGCCTTCAGAATCCGTCCTTGGGTCAGTCACTGACTCTGACTGATCCCGAGCTTCTCGTCT
ATGGACCTCTGTCCTCATCCATTCCAGTATGAAGGTTGGACTAGATGAGTCACAAGAGGATTCT
TCCAGCAACAGGGAAATCCTGTTACTCTCCAATTTTACCTGAAAATGGCAGTAGTTTACATTCG
TGTGGCACGGTACAGTTTCCCAAACACTTTTATGTGCATGCATCTTTTGTTACTCACCTCCAGT
CTGTTCCTGAGAGTGTGTCAGAGAGGAGACTTGGGGATTTGTAAGACCCCATCGATCCATTATG
TTAAATGGAACAAATAATGTGTCTCCTCGTATCTAAGAACTTGAACCAATTACTCAAACACTTA
AAAATTCGTTTAATGTCTATCAAGGATTTCCATGTCAGAAAGCCTTTAAAACCTAATCTTTAAC
TTTCAGTAAACTCACTGATGGACATGTTTGTGTATTGTACACAACAATATTGTACAGTATTAGA
TAAAAATTGCATCTTGCCTCACTGAACTTGTTACAAAATAAAAAAATGTGTGAAATAATGTATG
AAGATACATAATTCAATTAGCATTTAGTAAAACACAATTAACCAA

hide sequence

RefSeq Acc Id:

XM_014121649 ⟹ XP_013977124

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	20	6,049,612 - 6,089,850 (-)	NCBI
Dog10K_Boxer_Tasha	20	6,086,283 - 6,126,090 (-)	NCBI

Sequence:

show sequence

GACGTGGGACTCGATCCCGGGTCTCCAGGATCACGCCCTGGGCTGAAGGCGGCGCTAAACCGCT
GAGCCACCCGGCTGCCCAAGCCCTATTTTTCATAGTAAAGTAAATGGACCTAATGCTACTTGTA
TTTGGAGTTACCCCTGAGAAATGGCAGAAGCAGTTTTCCGTGCCCCAAAGCGGAAAAGAAGAGT
ATATGAGAGTTTTGAGTCTCCACTGCCCATCCCTTTTGGTCAAGACTGTGGGCCTAAGCAAGAT
TTCAAAGTGTTCACAGCAGAGATGATAAACAACAATGTAATTGTGAGGAACACAGAAGATATGG
AGCAGCTCTATGGGAAAGGTTATTTTGGAAAAGGTATCCTGTCTAGAAGCCGTCCAAACTTCAC
AATTTCAGATCCTAAGCTCGTTGCTAAGTGGAAAGATATGAAGACAGACATGCCTATAATCACG
TCAACAAAGTATCAGCATAGTGTAGAATGGGCCACAAAGCTCATGCAAAGACAGGGGCAGGATG
AGAGTACAGTGCGTAAAATCCTCCAGGATTACACAAAACCACTTGAGCATTCTGGTATAAAAAG
GAATGAAGAAGGTCAGCGGCATGACGAGCTGAACTCTGGAACAGTTTCCAAAATGGAAGGTACC
ACAGATAGAGAGGAACTTTCCATGATGAATGGGGACTCGGGTAAGTCTGTTGGCATGGAGGGTC
CCAGCAAGCCATCAGACCACCAGCAGCAGGGCTCTGGGCCTGACCCACTCACTCCAGATGGCCT
GGATGAATCTGTGGTAGAGGGTGCCACACTGCAACACTGCCCTCTGCCTCAAATTCACTGTGGC
AAAGATGATGGTCTCCTCCCCACACCTGGGGACACTCAGCCTGGGGACGGGAGCCAGCAAGCAG
ATCTCTGTGCCAGAAAGAGAGGGCCTGGTGATGAGTACGTGCTGGTGGAGGAAGATGTGTATGA
TGTGAGCGAGCAGGAATGTGCCCCAAATGAAGAATTGGCACCCAAAAAGAGATTAGTATGCAGA
AGAAATCCATATAGGATCTTGGAGTATTTGCAACTCAGCCTAGAAGAGGCCTTTTTCCTGGTCT
ATGCTCTAGGATGTCTGAGTATTTATTATGAGAAGGAGCCCTTAACAATCATGAAGCTCTGGAA
AGCTTTCACTGTAGTTCAGCCCACATTCAGGACTACATACATGGCATACCATTACTTCCGAAGC
AAGGGCTGGGTGCCCAAAGTGGGACTTAAGTATGGGACAGATTTACTGTTGTATCGAAAAGGCC
CTCCATTTTACCATGCAAGTTACTCTGTCATCATCGAGTTAGTCGACGACCATTTTGAGGGCTC
TCTTCGCAGACCCTTCAGTTGGAGGTCCCTGGCTGCCTTGAACAGGGTTTCAGTTAACGTCTCC
AAGGAACTCATGCTGTGCTATTTGATTAAACCCTCTACCATGACTGACAAAGAGATGGAGTCAC
CAGAATGTATGAAACAAATCAAAGTTCAGGAGGTGATTCTAAGCCGCTGGGTTTCTTCAAGAGA
GAGGAGTGACCAAGATGAACTTTAACAGTCCAACCTCAGAACTATGATTTACCAGCAAATACTA
TTGAGTCTCCTACAGTAAGCCAAGTTCAGTGTGAGGTAAAGAGTCCTCTTCTATAGCTGTCTGA
TAATTGAAAACTTTTAAAGGGCATGCCACTCCCAGCACCAAAAAGTGATTAGTATTTTATAAGA
TAAAATTACCCAGGAGACAAAAAAGCCCTGTGCTGGCCTTCAGAATCCGTCCTTGGGTCAGTCA
CTGACTCTGACTGATCCCGAGCTTCTCGTCTATGGACCTCTGTCCTCATCCATTCCAGTATGAA
GGTTGGACTAGATGAGTCACAAGAGGATTCTTCCAGCAACAGGGAAATCCTGTTACTCTCCAAT
TTTACCTGAAAATGGCAGTAGTTTACATTCGTGTGGCACGGTACAGTTTCCCAAACACTTTTAT
GTGCATGCATCTTTTGTTACTCACCTCCAGTCTGTTCCTGAGAGTGTGTCAGAGAGGAGACTTG
GGGATTTGTAAGACCCCATCGATCCATTATGTTAAATGGAACAAATAATGTGTCTCCTCGTATC
TAAGAACTTGAACCAATTACTCAAACACTTAAAAATTCGTTTAATGTCTATCAAGGATTTCCAT
GTCAGAAAGCCTTTAAAACCTAATCTTTAACTTTCAGTAAACTCACTGATGGACATGTTTGTGT
ATTGTACACAACAATATTGTACAGTATTAGATAAAAATTGCATCTTGCCTCACTGAACTTGTTA
CAAAATAAAAAAATGTGTGAAATAATGTATGAAGATACATAATTCAATTAGCATTTAGTAAAAC
ACAATTAACCAA

hide sequence

RefSeq Acc Id:

XM_014121651 ⟹ XP_013977126

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	20	6,049,612 - 6,089,658 (-)	NCBI
Dog10K_Boxer_Tasha	20	6,086,283 - 6,125,880 (-)	NCBI

Sequence:

show sequence

AGCTACATCCTTTACAGGTGCATAGCACTCGGCCCCTAGGGAGCTGTTGGGAGTGAGTTTGAAT
CGGCTATTCTGTCACCAGTAGTTGGCAGCTGTGTGACTACATGTTAAGATCACCTGGGTCCCAC
CCCAGAATTTCTGATGTAATTGCAGTTACCCCTGAGAAATGGCAGAAGCAGTTTTCCGTGCCCC
AAAGCGGAAAAGAAGAGTATATGAGAGTTTTGAGTCTCCACTGCCCATCCCTTTTGGTCAAGAC
TGTGGGCCTAAGCAAGATTTCAAAGTGTTCACAGCAGAGATGATAAACAACAATGTAATTGTGA
GGAACACAGAAGATATGGAGCAGCTCTATGGGAAAGGTTATTTTGGAAAAGGTATCCTGTCTAG
AAGCCGTCCAAACTTCACAATTTCAGATCCTAAGCTCGTTGCTAAGTGGAAAGATATGAAGACA
GACATGCCTATAATCACGTCAACAAAGTATCAGCATAGTGTAGAATGGGCCACAAAGCTCATGC
AAAGACAGGGGCAGGATGAGAGTACAGTGCGTAAAATCCTCCAGGATTACACAAAACCACTTGA
GCATTCTGGTATAAAAAGGAATGAAGAAGGTCAGCGGCATGACGAGCTGAACTCTGGAACAGTT
TCCAAAATGGAAGGTACCACAGATAGAGAGGAACTTTCCATGATGAATGGGGACTCGGGTAAGT
CTGTTGGCATGGAGGGTCCCAGCAAGCCATCAGACCACCAGCAGCAGGGCTCTGGGCCTGACCC
ACTCACTCCAGATGGCCTGGATGAATCTGTGGTAGAGGGTGCCACACTGCAACACTGCCCTCTG
CCTCAAATTCACTGTGGCAAAGATGATGGTCTCCTCCCCACACCTGGGGACACTCAGCCTGGGG
ACGGGAGCCAGCAAGCAGATCTCTGTGCCAGAAAGAGAGGGCCTGGTGATGAGTACGTGCTGGT
GGAGGAAGATGTGTATGATGTGAGCGAGCAGGAATGTGCCCCAAATGAAGAATTGGCACCCAAA
AAGAGATTAGTATGCAGAAGAAATCCATATAGGATCTTGGAGTATTTGCAACTCAGCCTAGAAG
AGGCCTTTTTCCTGGTCTATGCTCTAGGATGTCTGAGTATTTATTATGAGAAGGAGCCCTTAAC
AATCATGAAGCTCTGGAAAGCTTTCACTGTAGTTCAGCCCACATTCAGGACTACATACATGGCA
TACCATTACTTCCGAAGCAAGGGCTGGGTGCCCAAAGTGGGACTTAAGTATGGGACAGATTTAC
TGTTGTATCGAAAAGGCCCTCCATTTTACCATGCAAGTTACTCTGTCATCATCGAGTTAGTCGA
CGACCATTTTGAGGGCTCTCTTCGCAGACCCTTCAGTTGGAGGTCCCTGGCTGCCTTGAACAGG
GTTTCAGTTAACGTCTCCAAGGAACTCATGCTGTGCTATTTGATTAAACCCTCTACCATGACTG
ACAAAGAGATGGAGTCACCAGAATGTATGAAACAAATCAAAGTTCAGGAGGTGATTCTAAGCCG
CTGGGTTTCTTCAAGAGAGAGGAGTGACCAAGATGAACTTTAACAGTCCAACCTCAGAACTATG
ATTTACCAGCAAATACTATTGAGTCTCCTACAGTAAGCCAAGTTCAGTGTGAGGTAAAGAGTCC
TCTTCTATAGCTGTCTGATAATTGAAAACTTTTAAAGGGCATGCCACTCCCAGCACCAAAAAGT
GATTAGTATTTTATAAGATAAAATTACCCAGGAGACAAAAAAGCCCTGTGCTGGCCTTCAGAAT
CCGTCCTTGGGTCAGTCACTGACTCTGACTGATCCCGAGCTTCTCGTCTATGGACCTCTGTCCT
CATCCATTCCAGTATGAAGGTTGGACTAGATGAGTCACAAGAGGATTCTTCCAGCAACAGGGAA
ATCCTGTTACTCTCCAATTTTACCTGAAAATGGCAGTAGTTTACATTCGTGTGGCACGGTACAG
TTTCCCAAACACTTTTATGTGCATGCATCTTTTGTTACTCACCTCCAGTCTGTTCCTGAGAGTG
TGTCAGAGAGGAGACTTGGGGATTTGTAAGACCCCATCGATCCATTATGTTAAATGGAACAAAT
AATGTGTCTCCTCGTATCTAAGAACTTGAACCAATTACTCAAACACTTAAAAATTCGTTTAATG
TCTATCAAGGATTTCCATGTCAGAAAGCCTTTAAAACCTAATCTTTAACTTTCAGTAAACTCAC
TGATGGACATGTTTGTGTATTGTACACAACAATATTGTACAGTATTAGATAAAAATTGCATCTT
GCCTCACTGAACTTGTTACAAAATAAAAAAATGTGTGAAATAATGTATGAAGATACATAATTCA
ATTAGCATTTAGTAAAACACAATTAACCAA

hide sequence

RefSeq Acc Id:

XM_038426900 ⟹ XP_038282828

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	6,078,648 - 6,118,847 (-)	NCBI

RefSeq Acc Id:

XM_038426901 ⟹ XP_038282829

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	6,078,648 - 6,119,929 (-)	NCBI

RefSeq Acc Id:

XM_038426902 ⟹ XP_038282830

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	6,078,648 - 6,118,637 (-)	NCBI

RefSeq Acc Id:

XM_038502696 ⟹ XP_038358624

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	5,794,028 - 5,834,225 (-)	NCBI

RefSeq Acc Id:

XM_038502697 ⟹ XP_038358625

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	5,794,028 - 5,835,307 (-)	NCBI

RefSeq Acc Id:

XM_038502698 ⟹ XP_038358626

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	5,794,028 - 5,834,015 (-)	NCBI

RefSeq Acc Id:

XM_038565614 ⟹ XP_038421542

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	6,123,076 - 6,163,562 (-)	NCBI

RefSeq Acc Id:

XM_038565615 ⟹ XP_038421543

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	6,123,076 - 6,164,648 (-)	NCBI

RefSeq Acc Id:

XM_038565616 ⟹ XP_038421544

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	6,123,076 - 6,163,358 (-)	NCBI

RefSeq Acc Id:

XM_038629747 ⟹ XP_038485675

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	6,147,931 - 6,188,115 (-)	NCBI

RefSeq Acc Id:

XM_038629748 ⟹ XP_038485676

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	6,147,931 - 6,189,194 (-)	NCBI

RefSeq Acc Id:

XM_038629749 ⟹ XP_038485677

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	6,147,931 - 6,187,904 (-)	NCBI

RefSeq Acc Id:

XR_005297583

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	6,060,280 - 6,118,847 (-)	NCBI

RefSeq Acc Id:

XR_005297584

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	6,060,280 - 6,118,847 (-)	NCBI

RefSeq Acc Id:

XR_005297585

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	20	6,074,276 - 6,118,847 (-)	NCBI

RefSeq Acc Id:

XR_005312466

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	20	6,067,927 - 6,126,090 (-)	NCBI

RefSeq Acc Id:

XR_005312467

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	20	6,067,927 - 6,126,090 (-)	NCBI

RefSeq Acc Id:

XR_005312468

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	20	6,081,920 - 6,126,090 (-)	NCBI

RefSeq Acc Id:

XR_005340799

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	5,775,670 - 5,834,225 (-)	NCBI

RefSeq Acc Id:

XR_005340800

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	5,775,670 - 5,834,225 (-)	NCBI

RefSeq Acc Id:

XR_005340801

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	20	5,789,664 - 5,834,225 (-)	NCBI

RefSeq Acc Id:

XR_005374566

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	6,106,273 - 6,163,562 (-)	NCBI

RefSeq Acc Id:

XR_005374567

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	6,116,211 - 6,163,562 (-)	NCBI

RefSeq Acc Id:

XR_005374568

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	20	6,118,709 - 6,163,562 (-)	NCBI

RefSeq Acc Id:

XR_005408564

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	6,129,564 - 6,188,115 (-)	NCBI

RefSeq Acc Id:

XR_005408565

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	6,129,564 - 6,188,115 (-)	NCBI

RefSeq Acc Id:

XR_005408566

Type:

NON-CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	20	6,143,559 - 6,188,115 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_013977123	(Get FASTA)	NCBI Sequence Viewer
	XP_013977124	(Get FASTA)	NCBI Sequence Viewer
	XP_013977126	(Get FASTA)	NCBI Sequence Viewer
	XP_038282828	(Get FASTA)	NCBI Sequence Viewer
	XP_038282829	(Get FASTA)	NCBI Sequence Viewer
	XP_038282830	(Get FASTA)	NCBI Sequence Viewer
	XP_038358624	(Get FASTA)	NCBI Sequence Viewer
	XP_038358625	(Get FASTA)	NCBI Sequence Viewer
	XP_038358626	(Get FASTA)	NCBI Sequence Viewer
	XP_038421542	(Get FASTA)	NCBI Sequence Viewer
	XP_038421543	(Get FASTA)	NCBI Sequence Viewer
	XP_038421544	(Get FASTA)	NCBI Sequence Viewer
	XP_038485675	(Get FASTA)	NCBI Sequence Viewer
	XP_038485676	(Get FASTA)	NCBI Sequence Viewer
	XP_038485677	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000007420.4
	ENSCAFP00000007423.3
	ENSCAFP00000040069.3
	ENSCAFP00000047524.2
	ENSCAFP00000071530.1
	ENSCAFP00000074917.1
	ENSCAFP00000075127.1
	ENSCAFP00030037387.1
	ENSCAFP00030037571.1
	ENSCAFP00040035987.1
	ENSCAFP00040036015.1
	ENSCAFP00040036025.1
	ENSCAFP00040036148.1
	ENSCAFP00845040129
	ENSCAFP00845040129.1
	ENSCAFP00845040162.1
	ENSCAFP00845040184.1
	ENSCAFP00845040203.1

RefSeq Acc Id:

XP_013977123 ⟸ XM_014121648

- UniProtKB:

A0A8C0K243 (UniProtKB/TrEMBL), A0A8C0TFY8 (UniProtKB/TrEMBL), A0A8I3Q1M8 (UniProtKB/TrEMBL), A0A8C0TKA6 (UniProtKB/TrEMBL), A0A8P0N7R3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAEAVFRAPKRKRRVYESFESPLPIPFGQDCGPKQDFKVFTAEMINNNVIVRNTEDMEQLYGKG
YFGKGILSRSRPNFTISDPKLVAKWKDMKTDMPIITSTKYQHSVEWATKLMQRQGQDESTVRKI
LQDYTKPLEHSGIKRNEEGQRHDELNSGTVSKMEGTTDREELSMMNGDSGKSVGMEGPSKPSDH
QQQGSGPDPLTPDGLDESVVEGATLQHCPLPQIHCGKDDGLLPTPGDTQPGDGSQQADLCARKR
GPGDEYVLVEEDVYDVSEQECAPNEELAPKKRLVCRRNPYRILEYLQLSLEEAFFLVYALGCLS
IYYEKEPLTIMKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHAS
YSVIIELVDDHFEGSLRRPFSWRSLAALNRVSVNVSKELMLCYLIKPSTMTDKEMESPECMKQI
KVQEVILSRWVSSRERSDQDEL

hide sequence

RefSeq Acc Id:

XP_013977124 ⟸ XM_014121649

- UniProtKB:

A0A8C0K243 (UniProtKB/TrEMBL), A0A8C0TFY8 (UniProtKB/TrEMBL), A0A8I3Q1M8 (UniProtKB/TrEMBL), A0A8C0TKA6 (UniProtKB/TrEMBL), A0A8P0N7R3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAEAVFRAPKRKRRVYESFESPLPIPFGQDCGPKQDFKVFTAEMINNNVIVRNTEDMEQLYGKG
YFGKGILSRSRPNFTISDPKLVAKWKDMKTDMPIITSTKYQHSVEWATKLMQRQGQDESTVRKI
LQDYTKPLEHSGIKRNEEGQRHDELNSGTVSKMEGTTDREELSMMNGDSGKSVGMEGPSKPSDH
QQQGSGPDPLTPDGLDESVVEGATLQHCPLPQIHCGKDDGLLPTPGDTQPGDGSQQADLCARKR
GPGDEYVLVEEDVYDVSEQECAPNEELAPKKRLVCRRNPYRILEYLQLSLEEAFFLVYALGCLS
IYYEKEPLTIMKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHAS
YSVIIELVDDHFEGSLRRPFSWRSLAALNRVSVNVSKELMLCYLIKPSTMTDKEMESPECMKQI
KVQEVILSRWVSSRERSDQDEL

hide sequence

RefSeq Acc Id:

XP_013977126 ⟸ XM_014121651

- UniProtKB:

A0A8C0K243 (UniProtKB/TrEMBL), A0A8C0TFY8 (UniProtKB/TrEMBL), A0A8I3Q1M8 (UniProtKB/TrEMBL), A0A8C0TKA6 (UniProtKB/TrEMBL), A0A8P0N7R3 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAEAVFRAPKRKRRVYESFESPLPIPFGQDCGPKQDFKVFTAEMINNNVIVRNTEDMEQLYGKG
YFGKGILSRSRPNFTISDPKLVAKWKDMKTDMPIITSTKYQHSVEWATKLMQRQGQDESTVRKI
LQDYTKPLEHSGIKRNEEGQRHDELNSGTVSKMEGTTDREELSMMNGDSGKSVGMEGPSKPSDH
QQQGSGPDPLTPDGLDESVVEGATLQHCPLPQIHCGKDDGLLPTPGDTQPGDGSQQADLCARKR
GPGDEYVLVEEDVYDVSEQECAPNEELAPKKRLVCRRNPYRILEYLQLSLEEAFFLVYALGCLS
IYYEKEPLTIMKLWKAFTVVQPTFRTTYMAYHYFRSKGWVPKVGLKYGTDLLLYRKGPPFYHAS
YSVIIELVDDHFEGSLRRPFSWRSLAALNRVSVNVSKELMLCYLIKPSTMTDKEMESPECMKQI
KVQEVILSRWVSSRERSDQDEL

hide sequence

RefSeq Acc Id:

XP_038358625 ⟸ XM_038502697

RefSeq Acc Id:

XP_038358624 ⟸ XM_038502696

RefSeq Acc Id:

XP_038358626 ⟸ XM_038502698

RefSeq Acc Id:

XP_038485676 ⟸ XM_038629748

RefSeq Acc Id:

XP_038485675 ⟸ XM_038629747

RefSeq Acc Id:

XP_038485677 ⟸ XM_038629749

RefSeq Acc Id:	XP_038282829 ⟸ XM_038426901
- UniProtKB:	A0A8C0K243 (UniProtKB/TrEMBL), A0A8C0TFY8 (UniProtKB/TrEMBL), A0A8I3Q1M8 (UniProtKB/TrEMBL), A0A8C0TKA6 (UniProtKB/TrEMBL), A0A8P0N7R3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038282828 ⟸ XM_038426900
- UniProtKB:	A0A8C0K243 (UniProtKB/TrEMBL), A0A8C0TFY8 (UniProtKB/TrEMBL), A0A8I3Q1M8 (UniProtKB/TrEMBL), A0A8C0TKA6 (UniProtKB/TrEMBL), A0A8P0N7R3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038282830 ⟸ XM_038426902
- UniProtKB:	A0A8C0K243 (UniProtKB/TrEMBL), A0A8C0TFY8 (UniProtKB/TrEMBL), A0A8I3Q1M8 (UniProtKB/TrEMBL), A0A8C0TKA6 (UniProtKB/TrEMBL), A0A8P0N7R3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038421543 ⟸ XM_038565615
- UniProtKB:	A0A8C0PDE7 (UniProtKB/TrEMBL), A0A8C0TKA6 (UniProtKB/TrEMBL), A0A8P0N7R3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038421542 ⟸ XM_038565614
- UniProtKB:	A0A8C0PDE7 (UniProtKB/TrEMBL), A0A8C0TKA6 (UniProtKB/TrEMBL), A0A8P0N7R3 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038421544 ⟸ XM_038565616
- UniProtKB:	A0A8C0PDE7 (UniProtKB/TrEMBL), A0A8C0TKA6 (UniProtKB/TrEMBL), A0A8P0N7R3 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845040184 ⟸ ENSCAFT00845051236

Ensembl Acc Id:

ENSCAFP00845040203 ⟸ ENSCAFT00845051258

Ensembl Acc Id:

ENSCAFP00845040129 ⟸ ENSCAFT00845051171

Ensembl Acc Id:

ENSCAFP00845040162 ⟸ ENSCAFT00845051208

Protein Domains

NR LBD Nuclear receptor tRNA intron endonuclease catalytic tRNA intron endonuclease N-terminal

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000004991	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00000057543	UniProtKB/TrEMBL
	ENSCAFG00030023303	UniProtKB/TrEMBL
	ENSCAFG00030023385	UniProtKB/TrEMBL
	ENSCAFG00040022187	UniProtKB/TrEMBL
	ENSCAFG00040022282	UniProtKB/TrEMBL
	ENSCAFG00845028923	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000008014.6	UniProtKB/TrEMBL
	ENSCAFT00000008018.5	UniProtKB/TrEMBL
	ENSCAFT00000043380.3	UniProtKB/TrEMBL
	ENSCAFT00000074408.2	UniProtKB/TrEMBL
	ENSCAFT00000096771.1	UniProtKB/TrEMBL
	ENSCAFT00000106284.1	UniProtKB/TrEMBL
	ENSCAFT00000107762.1	UniProtKB/TrEMBL
	ENSCAFT00030042841.1	UniProtKB/TrEMBL
	ENSCAFT00030043044.1	UniProtKB/TrEMBL
	ENSCAFT00040041269.1	UniProtKB/TrEMBL
	ENSCAFT00040041297.1	UniProtKB/TrEMBL
	ENSCAFT00040041309.1	UniProtKB/TrEMBL
	ENSCAFT00040041440.1	UniProtKB/TrEMBL
	ENSCAFT00845051171	ENTREZGENE
	ENSCAFT00845051171.1	UniProtKB/TrEMBL
	ENSCAFT00845051208.1	UniProtKB/TrEMBL
	ENSCAFT00845051236.1	UniProtKB/TrEMBL
	ENSCAFT00845051258.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.565.10	UniProtKB/TrEMBL
	3.30.50.10	UniProtKB/TrEMBL
	3.40.1350.10	UniProtKB/TrEMBL
InterPro	1Cnucl_rcpt	UniProtKB/TrEMBL
	NHR-like_dom_sf	UniProtKB/TrEMBL
	Nucl_hrmn_rcpt_lig-bd	UniProtKB/TrEMBL
	Nuclear_hormone_rcpt_NR1	UniProtKB/TrEMBL
	Nuclear_hrmn_rcpt	UniProtKB/TrEMBL
	PPAR-gamma	UniProtKB/TrEMBL
	PPARgamma_N	UniProtKB/TrEMBL
	tRNA_endonuc-like_dom_sf	UniProtKB/TrEMBL
	tRNA_intron_Endo_cat-like_sf	UniProtKB/TrEMBL
	tRNA_intron_Endonuc_cat-like	UniProtKB/TrEMBL
	tRNA_intron_Endonuc_N	UniProtKB/TrEMBL
	tRNA_splic	UniProtKB/TrEMBL
	tRNA_splic_SEN2	UniProtKB/TrEMBL
	Znf_hrmn_rcpt	UniProtKB/TrEMBL
	Znf_NHR/GATA	UniProtKB/TrEMBL
KEGG Report	cfa:484651	UniProtKB/TrEMBL
NCBI Gene	TSEN2	ENTREZGENE
PANTHER	NUCLEAR HORMONE RECEPTOR	UniProtKB/TrEMBL
	PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA	UniProtKB/TrEMBL
	PTHR21227	UniProtKB/TrEMBL
	TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN2	UniProtKB/TrEMBL
Pfam	Hormone_recep	UniProtKB/TrEMBL
	PPARgamma_N	UniProtKB/TrEMBL
	tRNA_int_endo	UniProtKB/TrEMBL
	tRNA_int_endo_N	UniProtKB/TrEMBL
	zf-C4	UniProtKB/TrEMBL
PIRSF	tRNA_splic_SEN2	UniProtKB/TrEMBL
PRINTS	PROXISOMEPAR	UniProtKB/TrEMBL
	PROXISOMPAGR	UniProtKB/TrEMBL
	STRDHORMONER	UniProtKB/TrEMBL
	STROIDFINGER	UniProtKB/TrEMBL
PROSITE	NR_LBD	UniProtKB/TrEMBL
	NUCLEAR_REC_DBD_1	UniProtKB/TrEMBL
	NUCLEAR_REC_DBD_2	UniProtKB/TrEMBL
SMART	HOLI	UniProtKB/TrEMBL
	ZnF_C4	UniProtKB/TrEMBL
Superfamily-SCOP	Glucocorticoid receptor-like (DNA-binding domain)	UniProtKB/TrEMBL
	SSF48508	UniProtKB/TrEMBL
	SSF53032	UniProtKB/TrEMBL
UniProt	A0A8C0K243	ENTREZGENE
	A0A8C0PDE7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0PFP1_CANLF	UniProtKB/TrEMBL
	A0A8C0TEJ8_CANLF	UniProtKB/TrEMBL
	A0A8C0TFY8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0TKA6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3Q1M8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3Q542_CANLF	UniProtKB/TrEMBL
	A0A8I3Q5V8_CANLF	UniProtKB/TrEMBL
	A0A8I3Q6T1_CANLF	UniProtKB/TrEMBL
	A0A8P0N7R3	ENTREZGENE
	A0A8P0PS44_CANLF	UniProtKB/TrEMBL
	A0A8P0SU50_CANLF	UniProtKB/TrEMBL
	A0A8P0T0F7_CANLF	UniProtKB/TrEMBL
UniProt Secondary	A0A8P0N7R3	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

Imported Disease Annotations - OMIM

RGD Manual Annotations