UBXN1 (UBX domain protein 1) - Rat Genome Database

Name: UBXN1
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Gene: UBXN1 (UBX domain protein 1) Canis lupus familiaris

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Symbol:

UBXN1

Name:

UBX domain protein 1

RGD ID:

12337654

Description:

ENCODES a protein that exhibits ATPase binding (inferred); K48-linked polyubiquitin modification-dependent protein binding (inferred); K6-linked polyubiquitin modification-dependent protein binding (inferred); INVOLVED IN negative regulation of ubiquitin-specific protease activity (ortholog); ASSOCIATED WITH Charcot-Marie-Tooth disease type 2 (ortholog); Disease Progression (ortholog); intellectual disability (ortholog); FOUND IN dendrite (ortholog); neuronal cell body (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

UBX domain-containing protein 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	UBXN1 (UBX domain protein 1)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, PhylomeDB, Treefam
Mus musculus (house mouse):	Ubxn1 (UBX domain protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Ubxn1 (UBX domain protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Ubxn1 (UBX domain protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	UBXN1 (UBX domain protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Ubxn1 (UBX domain protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	UBXN1 (UBX domain protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	UBXN1 (UBX domain protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Ubxn1 (UBX domain protein 1)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	53,977,937 - 53,982,108 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	53,978,062 - 53,982,111 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	52,582,976 - 52,587,154 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	55,029,832 - 55,034,219 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	55,029,965 - 55,034,222 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	54,126,075 - 54,130,447 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	53,701,299 - 53,705,487 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	54,496,856 - 54,501,245 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Charcot-Marie-Tooth disease type 2 (ISO)

Disease Progression (ISO)

intellectual disability (ISO)

Larsen-like syndrome B3GAT3 type (ISO)

leukocyte adhesion deficiency 3 (ISO)

Stomach Neoplasms (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

negative regulation of ERAD pathway (IEA)

negative regulation of proteasomal ubiquitin-dependent protein catabolic process (IEA)

negative regulation of protein K48-linked deubiquitination (IEA)

negative regulation of protein ubiquitination (IEA)

negative regulation of ubiquitin-specific protease activity (ISO)

Cellular Component

cytoplasm (IEA)

cytosol (IEA)

dendrite (ISO)

endoplasmic reticulum (IEA)

neuronal cell body (ISO)

nucleoplasm (IEA)

VCP-NPL4-UFD1 AAA ATPase complex (IEA)

Molecular Function

ATPase binding (IEA)

K48-linked polyubiquitin modification-dependent protein binding (IEA)

K6-linked polyubiquitin modification-dependent protein binding (IEA)

polyubiquitin modification-dependent protein binding (IEA)

proteasome regulatory particle binding (IEA)

protein binding (ISO)

ubiquitin binding (IEA)

ubiquitin protein ligase binding (IEA)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

UBXN1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	18	53,977,937 - 53,982,108 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	18	53,978,062 - 53,982,111 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	18	52,582,976 - 52,587,154 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	18	55,029,832 - 55,034,219 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	18	55,029,965 - 55,034,222 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	18	54,126,075 - 54,130,447 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	18	53,701,299 - 53,705,487 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	18	54,496,856 - 54,501,245 (+)	NCBI		UU_Cfam_GSD_1.0

UBXN1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	11	62,676,500 - 62,679,073 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	11	62,676,498 - 62,679,117 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	11	62,443,972 - 62,446,545 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	11	62,200,548 - 62,203,103 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	11	59,773,551 - 59,776,106 (-)	NCBI		Celera
Cytogenetic Map	11	q12.3	NCBI
HuRef	11	58,772,838 - 58,775,393 (-)	NCBI		HuRef
CHM1_1	11	62,327,085 - 62,329,640 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	11	62,665,920 - 62,668,532 (-)	NCBI		T2T-CHM13v2.0

Ubxn1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	8,848,912 - 8,853,030 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	8,848,860 - 8,853,227 (+)	Ensembl		GRCm39 Ensembl
GRCm38	19	8,871,548 - 8,875,666 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	8,871,496 - 8,875,863 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	8,946,049 - 8,950,146 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	8,938,604 - 8,942,701 (+)	NCBI		MGSCv36	mm8
Celera	19	8,632,231 - 8,636,264 (+)	NCBI		Celera
Cytogenetic Map	19	A	NCBI
cM Map	19	5.88	NCBI

Ubxn1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	215,194,418 - 215,198,343 (+)	NCBI		GRCr8
mRatBN7.2	1	205,765,309 - 205,769,234 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	205,745,120 - 205,816,520 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	214,174,101 - 214,177,761 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	221,208,841 - 221,212,517 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	213,901,691 - 213,905,367 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	225,067,953 - 225,071,944 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	225,068,009 - 225,071,945 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	232,005,529 - 232,009,566 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	211,541,002 - 211,544,682 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	1	203,278,239 - 203,281,917 (+)	NCBI		Celera
Cytogenetic Map	1	q43	NCBI

Ubxn1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955599	526,966 - 529,735 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955599	526,792 - 529,825 (+)	NCBI	ChiLan1.0	ChiLan1.0

UBXN1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	9	63,903,014 - 63,906,113 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	11	64,945,716 - 64,948,311 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	11	58,033,304 - 58,035,893 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	11	61,386,795 - 61,389,404 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	11	61,386,797 - 61,389,404 (-)	Ensembl	panpan1.1		panPan2

Ubxn1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404947	10,471,145 - 10,474,117 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936581	584,315 - 591,612 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936581	584,519 - 587,863 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

UBXN1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	2	9,072,968 - 9,075,594 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	2	9,072,549 - 9,075,595 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	2	8,418,740 - 8,421,335 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

UBXN1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	1	11,228,944 - 11,231,549 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	1	11,228,135 - 11,231,459 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666038	108,562,873 - 108,565,478 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Ubxn1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624926	1,179,584 - 1,182,180 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624926	1,179,498 - 1,182,445 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in UBXN1
89 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005631615	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038425309	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038501578	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038564267	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038628404	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000214	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000176	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000018	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000024886 ⟹ ENSCAFP00000023090

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	53,978,062 - 53,982,054 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000046195 ⟹ ENSCAFP00000037281

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	53,978,062 - 53,981,888 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000068864 ⟹ ENSCAFP00000049976

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	18	53,978,062 - 53,982,111 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845015196 ⟹ ENSCAFP00845011799

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	18	55,029,965 - 55,034,222 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845015243 ⟹ ENSCAFP00845011838

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	18	55,029,965 - 55,034,165 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845015295 ⟹ ENSCAFP00845011875

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	18	55,029,965 - 55,034,157 (+)	Ensembl

RefSeq Acc Id:

XM_005631615 ⟹ XP_005631672

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	18	53,977,937 - 53,982,108 (+)	NCBI
Dog10K_Boxer_Tasha	18	52,582,976 - 52,587,154 (+)	NCBI

Sequence:

show sequence

GCGCTAAACCGCTGCGCCACCCAGGGATCCCCAGGCCCGTGCTTTTTGGCTCTCGGAGGCACCA
GTCCACGCCCGTCGCCACGTGACCCAAACAGATCCGGGCACTTCCGCTTCCCCTCGGCGTTTTT
CCCGTCCGTGTCCGCTGAGGGTCCAGAGCCGGGTCCGCGCGGAGGCGGCGGTGGCGGCGCCATG
GCGGAGCTGACGGCTCTAGAGAGTCTCATCGAGATGGGCTTCCCCAGGGGACGCGCGGAGAAGG
CTCTGGCCCTCACAGGGAACCAGGGCATCGAGGCTGCAATGGACTGGTTGATGGAGCACGAAGA
TGAACCAGATGTAGACGAGCCGCTGCCGACGCCCCTTGGACGTGCCCTGGGACGGGAACCCACC
GTCTCGGAACAAAGTGGCCCTGAAGGAACTGGCTCTACTGGCGGAGAAGGCAAACCCGTTTTGA
GTGAAGAGGAGAGGCAGGAACAGACCAAGAGGATGTTGGAGCTGGTGGCCCAGAAGCAGCGGGA
GCGTGAAGAAAGAGAGGAGCGCGAGGCTTTGGAACGGGAACGGCAGCGCAGGAAACAAGGGCAA
GAGTTGTCAGCGGCTCGGCAGCGGCTGCAAGAAGATGAGATGCGCCGGGCTGCTGAGGAGCGGA
GGAGGGAAAAGGCTGAAGAGTTAGCAGCCAGACAGAGAGTCCGAGAAAAGATTGAAAGAGACAA
AGCAGAGAGAGCTAAGAAGTATGGTGGTAATGTGGGCTCTCGGCCGTCTCCACCAACAGAGCCA
GGGCCGGTTCCGTCCTCTCCCAGCCAGGAGCCTCCCTCCAAGCGGGAGTATGACCAGTGTCGCA
TACAGGTCAGGCTGCCAGATGGGACCTCACTGACCCAGACGTTCCGGGCACGGGAACAGCTGGC
CGCTGTGAGGCTCTATGTGGAGCTCCACCGTGGAGAAGAGCCTGGGGGAGACCAGGACCCTGTG
CAGTTGCTCAGTGGCTTTCCCCGGCGGGCCTTCTCAGAGGCTGACATGGAACGGCCTCTGCAGG
AGCTGGGACTTGTGCCTTCTGCTGTTCTTATTGTGGCCAAGAAATGTCCCAGCTGAGAGGCCTT
TATCCCACCATCTCTCTCTGACCTCTTCATCTTTGATAAAGCACTGACATCTCCTTCCTAATAA
ATAGACCCTGAGTTCTCTA

hide sequence

RefSeq Acc Id:

XM_038425309 ⟹ XP_038281237

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	18	55,029,832 - 55,034,219 (+)	NCBI

RefSeq Acc Id:

XM_038501578 ⟹ XP_038357506

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	18	54,126,075 - 54,130,447 (+)	NCBI

RefSeq Acc Id:

XM_038564267 ⟹ XP_038420195

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	18	54,496,856 - 54,501,245 (+)	NCBI

RefSeq Acc Id:

XM_038628404 ⟹ XP_038484332

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	18	53,701,299 - 53,705,487 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005631672	(Get FASTA)	NCBI Sequence Viewer
	XP_038281237	(Get FASTA)	NCBI Sequence Viewer
	XP_038357506	(Get FASTA)	NCBI Sequence Viewer
	XP_038420195	(Get FASTA)	NCBI Sequence Viewer
	XP_038484332	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000023090.3
	ENSCAFP00000037281.2
	ENSCAFP00000049976.1
	ENSCAFP00030009791.1
	ENSCAFP00030009826.1
	ENSCAFP00030009857.1
	ENSCAFP00040030783.1
	ENSCAFP00040030853.1
	ENSCAFP00040030919.1
	ENSCAFP00845011799.1
	ENSCAFP00845011838
	ENSCAFP00845011838.1
	ENSCAFP00845011875.1

RefSeq Acc Id:

XP_005631672 ⟸ XM_005631615

- UniProtKB:

A0A8C0KLM0 (UniProtKB/TrEMBL), A0A8C0T2W0 (UniProtKB/TrEMBL), A0A8I3N9J6 (UniProtKB/TrEMBL), A0A8C0MPI6 (UniProtKB/TrEMBL), A0A8P0SS09 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MAELTALESLIEMGFPRGRAEKALALTGNQGIEAAMDWLMEHEDEPDVDEPLPTPLGRALGREP
TVSEQSGPEGTGSTGGEGKPVLSEEERQEQTKRMLELVAQKQREREEREEREALERERQRRKQG
QELSAARQRLQEDEMRRAAEERRREKAEELAARQRVREKIERDKAERAKKYGGNVGSRPSPPTE
PGPVPSSPSQEPPSKREYDQCRIQVRLPDGTSLTQTFRAREQLAAVRLYVELHRGEEPGGDQDP
VQLLSGFPRRAFSEADMERPLQELGLVPSAVLIVAKKCPS

hide sequence

Ensembl Acc Id:

ENSCAFP00000049976 ⟸ ENSCAFT00000068864

Ensembl Acc Id:

ENSCAFP00000023090 ⟸ ENSCAFT00000024886

Ensembl Acc Id:

ENSCAFP00000037281 ⟸ ENSCAFT00000046195

RefSeq Acc Id:

XP_038357506 ⟸ XM_038501578

RefSeq Acc Id:

XP_038484332 ⟸ XM_038628404

RefSeq Acc Id:	XP_038281237 ⟸ XM_038425309
- UniProtKB:	A0A8C0KLM0 (UniProtKB/TrEMBL), A0A8C0T2W0 (UniProtKB/TrEMBL), A0A8I3N9J6 (UniProtKB/TrEMBL), A0A8C0MPI6 (UniProtKB/TrEMBL), A0A8P0SS09 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038420195 ⟸ XM_038564267
- UniProtKB:	A0A8C0KLM0 (UniProtKB/TrEMBL), A0A8C0MPI6 (UniProtKB/TrEMBL), A0A8C0T2W0 (UniProtKB/TrEMBL), A0A8I3N9J6 (UniProtKB/TrEMBL), A0A8P0SS09 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845011799 ⟸ ENSCAFT00845015196

Ensembl Acc Id:

ENSCAFP00845011875 ⟸ ENSCAFT00845015295

Ensembl Acc Id:

ENSCAFP00845011838 ⟸ ENSCAFT00845015243

Protein Domains

UBA UBX

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000015710	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030006074	UniProtKB/TrEMBL
	ENSCAFG00040019079	UniProtKB/TrEMBL
	ENSCAFG00845008628	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000024886.6	UniProtKB/TrEMBL
	ENSCAFT00000046195.3	UniProtKB/TrEMBL
	ENSCAFT00000068864.2	UniProtKB/TrEMBL
	ENSCAFT00030011198.1	UniProtKB/TrEMBL
	ENSCAFT00030011239.1	UniProtKB/TrEMBL
	ENSCAFT00030011275.1	UniProtKB/TrEMBL
	ENSCAFT00040035353.1	UniProtKB/TrEMBL
	ENSCAFT00040035436.1	UniProtKB/TrEMBL
	ENSCAFT00040035508.1	UniProtKB/TrEMBL
	ENSCAFT00845015196.1	UniProtKB/TrEMBL
	ENSCAFT00845015243	ENTREZGENE
	ENSCAFT00845015243.1	UniProtKB/TrEMBL
	ENSCAFT00845015295.1	UniProtKB/TrEMBL
Gene3D-CATH	DNA helicase RuvA subunit, C-terminal domain	UniProtKB/TrEMBL
InterPro	UBA	UniProtKB/TrEMBL
	UBA-like_sf	UniProtKB/TrEMBL
	UBA_UBXN1	UniProtKB/TrEMBL
	Ubiquitin-like_domsf	UniProtKB/TrEMBL
	UBX_dom	UniProtKB/TrEMBL
KEGG Report	cfa:476055	UniProtKB/TrEMBL
NCBI Gene	UBXN1	ENTREZGENE
PANTHER	UBX DOMAIN-CONTAINING PROTEIN 1	UniProtKB/TrEMBL
	UBX DOMAIN-CONTAINING PROTEIN 1	UniProtKB/TrEMBL
Pfam	UBA_7	UniProtKB/TrEMBL
	UBX	UniProtKB/TrEMBL
PROSITE	UBA	UniProtKB/TrEMBL
	UBX	UniProtKB/TrEMBL
SMART	UBA	UniProtKB/TrEMBL
	UBX	UniProtKB/TrEMBL
Superfamily-SCOP	SSF46934	UniProtKB/TrEMBL
	SSF54236	UniProtKB/TrEMBL
UniProt	A0A8C0KLM0	ENTREZGENE
	A0A8C0MPI6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0T2W0	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0T4V8_CANLF	UniProtKB/TrEMBL
	A0A8C0Z233_CANLF	UniProtKB/TrEMBL
	A0A8I3N9J6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NBP3_CANLF	UniProtKB/TrEMBL
	A0A8I3RW88_CANLF	UniProtKB/TrEMBL
	A0A8P0SS09	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:48095	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD