TRIM47 (tripartite motif containing 47)

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Gene: TRIM47 (tripartite motif containing 47) Canis lupus familiaris

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Symbol:

TRIM47

Name:

tripartite motif containing 47

RGD ID:

12312569

Description:

ENCODES a protein that exhibits ubiquitin protein ligase activity (ortholog); INVOLVED IN regulation of postsynapse assembly (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); Experimental Neoplasms (ortholog); Neoplasm Invasiveness (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

E3 ubiquitin-protein ligase TRIM47; tripartite motif-containing protein 47

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	4,718,806 - 4,731,121 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	4,726,249 - 4,730,790 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	5,406,720 - 5,411,258 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	5,396,740 - 5,401,287 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	5,396,459 - 5,401,302 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	5,436,492 - 5,441,029 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	5,546,182 - 5,550,719 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	5,606,839 - 5,611,364 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Breast Neoplasms (ISO)

Experimental Neoplasms (ISO)

Neoplasm Invasiveness (ISO)

peroxisomal acyl-CoA oxidase deficiency (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

protein ubiquitination (IEA)

regulation of postsynapse assembly (ISO)

Cellular Component

cytoplasm (IEA)

cytosol (IEA)

glutamatergic synapse (ISO)

postsynapse (ISO)

Molecular Function

metal ion binding (IEA)

protein binding (ISO)

ubiquitin protein ligase activity (ISO)

ubiquitin-protein transferase activity (IEA)

zinc ion binding (IEA)

References

Additional References at PubMed

PMID:22301074

Genomics

Comparative Map Data

TRIM47
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	9	4,718,806 - 4,731,121 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	9	4,726,249 - 4,730,790 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	9	5,406,720 - 5,411,258 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	9	5,396,740 - 5,401,287 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	9	5,396,459 - 5,401,302 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	9	5,436,492 - 5,441,029 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	9	5,546,182 - 5,550,719 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	9	5,606,839 - 5,611,364 (+)	NCBI		UU_Cfam_GSD_1.0

TRIM47
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	17	75,874,164 - 75,878,581 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	17	75,874,164 - 75,878,581 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	17	73,870,245 - 73,874,662 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	17	71,381,840 - 71,386,251 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	17	71,381,841 - 71,386,251	NCBI
Celera	17	70,460,294 - 70,464,705 (-)	NCBI		Celera
Cytogenetic Map	17	q25.1	NCBI
HuRef	17	69,295,889 - 69,300,300 (-)	NCBI		HuRef
CHM1_1	17	73,935,205 - 73,939,617 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	17	76,767,314 - 76,771,775 (-)	NCBI		T2T-CHM13v2.0

Trim47
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	11	115,996,576 - 116,001,061 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	11	115,996,578 - 116,018,036 (-)	Ensembl		GRCm39 Ensembl
GRCm38	11	116,105,750 - 116,110,235 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	11	116,105,752 - 116,127,210 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	11	115,967,140 - 115,971,330 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	11	115,921,849 - 115,926,298 (-)	NCBI		MGSCv36	mm8
Celera	11	127,869,116 - 127,873,315 (-)	NCBI		Celera
Cytogenetic Map	11	E2	NCBI
cM Map	11	80.91	NCBI

Trim47
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	10	101,836,465 - 101,840,936 (-)	NCBI		GRCr8
mRatBN7.2	10	101,337,573 - 101,342,044 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	10	101,337,573 - 101,342,044 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	10	106,399,062 - 106,403,533 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	10	105,862,154 - 105,866,625 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	10	101,258,492 - 101,262,963 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	10	104,654,717 - 104,659,188 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	10	104,654,717 - 104,659,188 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	10	103,626,183 - 103,630,654 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	10	106,211,265 - 106,215,736 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	10	99,911,258 - 99,915,729 (-)	NCBI		Celera
Cytogenetic Map	10	q32.1	NCBI

Trim47
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955506	6,379,088 - 6,385,446 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955506	6,379,088 - 6,383,671 (+)	NCBI	ChiLan1.0	ChiLan1.0

TRIM47
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	19	91,918,356 - 91,922,806 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	17	96,743,059 - 96,747,563 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	17	69,824,959 - 69,829,442 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	17	75,375,749 - 75,380,031 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	17	75,376,071 - 75,379,964 (-)	Ensembl	panpan1.1		panPan2

Trim47
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405602	5,359,668 - 5,362,651 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936594	1,049,470 - 1,053,515 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936594	1,049,308 - 1,053,533 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TRIM47
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	12	5,535,236 - 5,539,715 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	12	5,535,259 - 5,539,721 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	12	5,491,990 - 5,496,460 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TRIM47
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	16	45,806,945 - 45,811,468 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	16	45,806,991 - 45,811,469 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666077	16,560,908 - 16,565,442 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Trim47
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624801	5,761,584 - 5,765,873 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624801	5,761,584 - 5,765,866 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TRIM47
137 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_014116207	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038484887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038546569	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038546570	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038610568	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038610569	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038625396	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038675692	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000091	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000103	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000313	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000009	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000007956 ⟹ ENSCAFP00000007367

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	9	4,726,249 - 4,730,790 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845040147 ⟹ ENSCAFP00845031442

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	9	5,396,459 - 5,401,302 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845040229 ⟹ ENSCAFP00845031512

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	9	5,396,753 - 5,401,302 (+)	Ensembl

RefSeq Acc Id:

XM_014116207 ⟹ XP_013971682

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	9	4,718,806 - 4,731,121 (+)	NCBI
Dog10K_Boxer_Tasha	9	5,406,720 - 5,411,258 (+)	NCBI

Sequence:

show sequence

ATGCAAACACCCCGCAGCCGCTTGCCTCCCATGCAGTGTGCCGCCCTCCCCTTGGACCGGGAGG
CACGGTCGTCCAGGGGCCCCTGGGGGTCACACGGGGCCGGGGCCGCGCGCGCAGCCTGGGCTGG
GGCCGGTGTCCCGGGCCCCGGGGGCGGGCCGAGCGGGGGACGGAAGGGGGCTGGACCCTTGGCC
CGGGTCCCGGGGGCGGGGCCGCAGCGCGCGGGCCGGGGCCCTCCCTGGGCGGGAGCAGAGCAAG
CGGCGCCCGGGCGGCCGCGGAGCTATGGACGGCAGCGGGCCCTTCGGCTGCCCCATCTGCCTGG
AGCCGCTCCGGTAGCCGGAGACGCTGCCCTGCGGCCCAACTTCTGCCTGGGCTGCCTGGGCGCG
CTCTGGCCGCACCGCGGCGCGGTTGGCACCGGCGGGCCCGGAGGCGCGGCCCGCTGCCCGCTGT
GCCAGGAGCCCTTCCCCGACGGCCTGCAGCTCCGCAAGAACCACACGCTGTCCGAGCTGCTGCA
GCTCCGCCAGGGCTCGGGCTCCGCGCCCGGGCCCGGCCCGGCCCCGGCCCCGGCCCCGGCCCCG
GCCCCGGCCCCGGAGCCCACGCCGCCCAGCGCGCCGCCCAGCGCCCCGGAGCCCTCGGCTCCCT
GCGCGCCCGAGCCCTGGCCCGGCGGCGAAGAGCCGGTGCGCTGCGACGCGTGCCCCGAGGGCGC
CGCCCTGCCCGCCGCGCTGTCCTGCCTCTCCTGCCTCGCCTCCTTCTGCCCCGCGCACCTGGGC
CCGCACGACCGCAGCCCCGCGCTGCGCGGACACCGCCTGGTGCCGCCGCTGCGCCGGCTGGAGG
AGAGCCTGTGCCCGCGCCACCTGCGGCCGCTCGAGCGCTACTGCCGCGCCGAGCGCGTGTGCCT
GTGCGAGGCCTGCGCCGCCCAGGAGCACCGGGGCCACGAACTCGTGCCGCTGGAGCAGGAGCGC
GCGCTCCAGGAGGCGGACCAATCCAAAGTCCTGAGTGCCGTGGAGGATCGCATGGATGAGCTGG
GCGCTGGCATTGCACTGTCCCGGCGCACGGTGGCCCTCATCAAGAGCGCAGCCTTGGCAGAGCG
GGAGAAGGTGAGCCGACTGTTCACCGAGGCTGCGGCCATCCTGCAGGGCTTCCAGACAGAGGTG
CTGGGCTTCATCGAGGAGGGGGAGGCCACCATGCTGGGCCGCTCCCAGGGTGACCTGCGGCGCC
AGGAGGAACAGCGCAGTAGGCTGAGCCGGGCCCGCCACAACCTCAGTCAGGTCCCCGAGGCCGA
CTCGGTCAGCTTCCTGCAGGAGCTCCTGGCATTGAGGCTGGCCCTGGAGGAGGGGTGCGGCCCT
GGGCCCGGCCCCCCGAGGGAGCTCAGCTTCACAAAATCCTCCCAAGCCGTGCGGGCGGTTAGAG
ATGTGCTGGCAGCGGCCTGTGCCAGCCAGTGGGAGCAGCTGCGGGGGTTGGGCGGTGATGAAGA
CGAGTTGCAGAAGTTGGGCACAGAAGATGCCGAGTCCCAAGACCCTGATAGCACCAACAACGTG
GAGAGTGAGGCTCCCAGGGATTACTTCCTCAAGTTCGCCTACATCGTGGACCTGGACAGCGACA
CGGCAGACAAGTACTTGCAGCTGTTTGGGACCAAAGGTGTAAAGAGGGTGCTGTGTCCCATCAA
CTACCCTGAGTCACCCACCCGCTTCACCCACTGCGAGCAGGTGCTGGGTGAGGGCGCCCTGGAC
CGGGGCACCTACTACTGGGAGGTAGAGATCATCGACGGCTGGGTCAGCGTGGGGGTCATGGCCG
AAGACTTCTCCCCGCAAGAGCCCTATGATCGGGGCCGGCTGGGCCGCAACGCCCACTCCTGCTG
CCTGCAGTGGAATGGACGGAGCTTCTCCGTCTGGTTCCACGGGCTCGAGGCGCCCCTGCCCCAG
CCCTTCTCGCCCACCGTCGGGATCTGCCTAGAATATGCTGACCGAGCCCTGGCCTTCTACGCCG
TGCGGGACGGCAAGATGAACCTGCTTCGGAGGTTGAAGGCCTCCAGGGCCCGCCGGAGCAGCAC
CCTGGCCTCCTCCATCGACCCCTTCCAGAGCCGCCTGGATGGCCATTTTGCAGGACTCTTCACT
CGCAGGCTCAAGCCTGCTTTCTTCCTGGAGAGTGTGGACGCCCACCTGCAGATCGGGCCTCTCA
AGAAGTCCTGCATATCTGTGCTGAAGAGGAGGTGATGCCGGAGGGCATGGGGCCTCCTGCAGTG
TTTCTGCTCCTGGGAAGCTAGCTTCTCTTCACACCCTCATCTTGACCCCAGGGAACGGTACTGT
GGAGTCCCCCACCTCCCCAGGCTTCTCATTCCTGGAGGCCTCCTGGGCCTTCCACCTCTCAAGG
AGCGTCCCCCAGACCCCTTGAAATGCCCCTCAGACCCTGTCCCCCTGTAGGCCTTGTTTCTGGG
AGAGAAAGCCAGAGCTGGGACAGATCCAGGCTACCCGGTCCCTCCTTTCCCAGGTTCCTGGGAC
AGTGCCTGGCACATAGTAGGTGCTGAATAAATATTTGTTGAATGAA

hide sequence

RefSeq Acc Id:

XM_038484887 ⟹ XP_038340815

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	9	5,436,492 - 5,441,029 (+)	NCBI

RefSeq Acc Id:

XM_038546569 ⟹ XP_038402497

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	5,606,839 - 5,611,364 (+)	NCBI

RefSeq Acc Id:

XM_038546570 ⟹ XP_038402498

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	9	5,606,839 - 5,611,364 (+)	NCBI

RefSeq Acc Id:

XM_038610568 ⟹ XP_038466496

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	5,546,182 - 5,550,719 (+)	NCBI

RefSeq Acc Id:

XM_038610569 ⟹ XP_038466497

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	9	5,546,182 - 5,550,719 (+)	NCBI

RefSeq Acc Id:

XM_038625396 ⟹ XP_038481324

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	9	5,406,720 - 5,411,258 (+)	NCBI

RefSeq Acc Id:

XM_038675692 ⟹ XP_038531620

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	9	5,396,740 - 5,401,287 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_013971682	(Get FASTA)	NCBI Sequence Viewer
	XP_038340815	(Get FASTA)	NCBI Sequence Viewer
	XP_038402497	(Get FASTA)	NCBI Sequence Viewer
	XP_038402498	(Get FASTA)	NCBI Sequence Viewer
	XP_038466496	(Get FASTA)	NCBI Sequence Viewer
	XP_038466497	(Get FASTA)	NCBI Sequence Viewer
	XP_038481324	(Get FASTA)	NCBI Sequence Viewer
	XP_038531620	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00040002934.1
	ENSCAFP00845031442
	ENSCAFP00845031442.1
	ENSCAFP00845031512.1

RefSeq Acc Id:	XP_013971682 ⟸ XM_014116207
- Peptide Label:	isoform X5
- UniProtKB:	A0A8C0PR99 (UniProtKB/TrEMBL), A0A8I3PH65 (UniProtKB/TrEMBL)
- Sequence:	show sequence MQTPRSRLPPMQCAALPLDREARSSRGPWGSHGAGAARAAWAGAGVPGPGGGPSGGRKGAGPLA RVPGAGPQRAGRGPPWAGAEQAAPGRPRSYGRQRALRLPHLPGAAPVAGDAALRPNFCLGCLGA LWPHRGAVGTGGPGGAARCPLCQEPFPDGLQLRKNHTLSELLQLRQGSGSAPGPGPAPAPAPAP APAPEPTPPSAPPSAPEPSAPCAPEPWPGGEEPVRCDACPEGAALPAALSCLSCLASFCPAHLG PHDRSPALRGHRLVPPLRRLEESLCPRHLRPLERYCRAERVCLCEACAAQEHRGHELVPLEQER ALQEADQSKVLSAVEDRMDELGAGIALSRRTVALIKSAALAEREKVSRLFTEAAAILQGFQTEV LGFIEEGEATMLGRSQGDLRRQEEQRSRLSRARHNLSQVPEADSVSFLQELLALRLALEEGCGP GPGPPRELSFTKSSQAVRAVRDVLAAACASQWEQLRGLGGDEDELQKLGTEDAESQDPDSTNNV ESEAPRDYFLKFAYIVDLDSDTADKYLQLFGTKGVKRVLCPINYPESPTRFTHCEQVLGEGALD RGTYYWEVEIIDGWVSVGVMAEDFSPQEPYDRGRLGRNAHSCCLQWNGRSFSVWFHGLEAPLPQ PFSPTVGICLEYADRALAFYAVRDGKMNLLRRLKASRARRSSTLASSIDPFQSRLDGHFAGLFT RRLKPAFFLESVDAHLQIGPLKKSCISVLKRR hide sequence

Ensembl Acc Id:

ENSCAFP00000007367 ⟸ ENSCAFT00000007956

RefSeq Acc Id:	XP_038340815 ⟸ XM_038484887
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038466497 ⟸ XM_038610569
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038466496 ⟸ XM_038610568
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038531620 ⟸ XM_038675692
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0PR99 (UniProtKB/TrEMBL), A0A8I3PH65 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038481324 ⟸ XM_038625396
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0JVI0 (UniProtKB/TrEMBL), A0A8C0PR99 (UniProtKB/TrEMBL), A0A8I3PH65 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038402497 ⟸ XM_038546569
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0PR99 (UniProtKB/TrEMBL), A0A8I3PH65 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038402498 ⟸ XM_038546570
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0PR99 (UniProtKB/TrEMBL), A0A8I3PH65 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845031512 ⟸ ENSCAFT00845040229

Ensembl Acc Id:

ENSCAFP00845031442 ⟸ ENSCAFT00845040147

Protein Domains

B box-type B30.2/SPRY RING-type

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000004953	Ensembl
	ENSCAFG00040001811	UniProtKB/TrEMBL
	ENSCAFG00845022732	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00040003424.1	UniProtKB/TrEMBL
	ENSCAFT00845040147	ENTREZGENE
	ENSCAFT00845040147.1	UniProtKB/TrEMBL
	ENSCAFT00845040229.1	UniProtKB/TrEMBL
Gene3D-CATH	2.60.120.920	UniProtKB/TrEMBL
	3.30.40.10	UniProtKB/TrEMBL
	4.10.830.40	UniProtKB/TrEMBL
	Classic Zinc Finger	UniProtKB/TrEMBL
InterPro	B30.2/SPRY	UniProtKB/TrEMBL
	B30.2/SPRY_sf	UniProtKB/TrEMBL
	ConA-like_dom_sf	UniProtKB/TrEMBL
	E3_ubiq-ligase_TRIM/RNF	UniProtKB/TrEMBL
	PRY	UniProtKB/TrEMBL
	TRIM47_SPRY_PRY	UniProtKB/TrEMBL
	Znf-RING_LisH	UniProtKB/TrEMBL
	Znf_B-box	UniProtKB/TrEMBL
	Znf_RING	UniProtKB/TrEMBL
	Znf_RING/FYVE/PHD	UniProtKB/TrEMBL
	Znf_RING_CS	UniProtKB/TrEMBL
NCBI Gene	TRIM47	ENTREZGENE
PANTHER	B-BOX DOMAIN CONTAINING	UniProtKB/TrEMBL
	E3 UBIQUITIN-PROTEIN LIGASE TRIM47	UniProtKB/TrEMBL
Pfam	PRY	UniProtKB/TrEMBL
	zf-B_box	UniProtKB/TrEMBL
	zf-RING_UBOX	UniProtKB/TrEMBL
PROSITE	B302_SPRY	UniProtKB/TrEMBL
	ZF_BBOX	UniProtKB/TrEMBL
	ZF_RING_1	UniProtKB/TrEMBL
	ZF_RING_2	UniProtKB/TrEMBL
SMART	BBOX	UniProtKB/TrEMBL
	PRY	UniProtKB/TrEMBL
	RING	UniProtKB/TrEMBL
Superfamily-SCOP	B-box zinc-binding domain	UniProtKB/TrEMBL
	RING/U-box	UniProtKB/TrEMBL
	SSF49899	UniProtKB/TrEMBL
UniProt	A0A8C0JVI0	ENTREZGENE
	A0A8C0PR99	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PH65	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3S3A2_CANLF	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD

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Imported Disease Annotations - ClinVar

Imported Disease Annotations - CTD