RBFOX1 (RNA binding fox-1 homolog 1) - Rat Genome Database

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Gene: RBFOX1 (RNA binding fox-1 homolog 1) Canis lupus familiaris
Analyze
Symbol: RBFOX1
Name: RNA binding fox-1 homolog 1
RGD ID: 12308920
Description: ENCODES a protein that exhibits mRNA 3'-UTR binding (ortholog); INVOLVED IN neuromuscular process controlling balance (ortholog); regulation of alternative mRNA splicing, via spliceosome (ortholog); regulation of skeletal muscle cell differentiation (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autistic disorder (ortholog); benign epilepsy with centrotemporal spikes (ortholog); FOUND IN cytoplasm (inferred); cytoplasmic stress granule (inferred); nuclear stress granule (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: RNA binding protein fox-1 homolog 1; RNA binding protein, fox-1 homolog 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1634,218,276 - 36,255,529 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl634,220,648 - 36,255,384 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha635,609,952 - 37,647,214 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0634,421,178 - 36,456,830 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl634,422,071 - 36,456,879 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1634,218,561 - 36,256,306 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0634,090,868 - 36,147,046 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0634,513,003 - 36,547,216 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
RBFOX1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1634,218,276 - 36,255,529 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl634,220,648 - 36,255,384 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha635,609,952 - 37,647,214 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0634,421,178 - 36,456,830 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl634,422,071 - 36,456,879 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1634,218,561 - 36,256,306 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0634,090,868 - 36,147,046 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0634,513,003 - 36,547,216 (-)NCBIUU_Cfam_GSD_1.0
RBFOX1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38165,239,721 - 7,713,340 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl165,239,802 - 7,713,340 (+)EnsemblGRCh38hg38GRCh38
GRCh37166,069,025 - 7,763,342 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36166,009,133 - 7,702,500 (+)NCBINCBI36Build 36hg18NCBI36
Celera166,278,710 - 7,977,033 (+)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef166,033,145 - 7,728,991 (+)NCBIHuRef
CHM1_1166,071,131 - 7,764,167 (+)NCBICHM1_1
T2T-CHM13v2.0165,269,380 - 7,744,948 (+)NCBIT2T-CHM13v2.0
Rbfox1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39165,702,566 - 7,230,344 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl165,703,219 - 7,229,390 (+)EnsemblGRCm39 Ensembl
GRCm38165,884,793 - 7,412,480 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl165,885,355 - 7,411,526 (+)EnsemblGRCm38mm10GRCm38
MGSCv37165,884,886 - 7,412,573 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36165,800,319 - 7,326,847 (+)NCBIMGSCv36mm8
Celera166,516,973 - 8,058,700 (+)NCBICelera
Cytogenetic Map16A1NCBI
cM Map163.34NCBI
Rbfox1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8108,658,809 - 10,754,648 (-)NCBIGRCr8
mRatBN7.2108,152,198 - 10,248,120 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl108,152,198 - 9,686,659 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1012,854,706 - 13,195,257 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01012,345,337 - 12,686,155 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0108,002,626 - 8,343,153 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0108,312,961 - 10,437,778 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl108,312,961 - 8,654,892 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0107,109,396 - 7,482,255 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4108,213,474 - 8,561,580 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1108,216,011 - 8,561,515 (-)NCBI
Celera107,132,939 - 7,472,569 (-)NCBICelera
Cytogenetic Map10q12NCBI
Rbfox1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544210,344,365 - 10,908,434 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544210,345,261 - 10,694,602 (-)NCBIChiLan1.0ChiLan1.0
RBFOX1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2185,767,287 - 8,246,570 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1169,557,393 - 12,037,776 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0164,162,659 - 6,640,962 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1165,415,947 - 7,889,215 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl165,418,607 - 7,889,215 (+)Ensemblpanpan1.1panPan2
Rbfox1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344107,414,183 - 108,998,589 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365306,306,877 - 6,845,073 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365305,259,612 - 6,843,668 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
RBFOX1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl334,939,573 - 37,300,810 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1334,938,703 - 37,209,772 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2335,870,791 - 36,254,430 (-)NCBISscrofa10.2Sscrofa10.2susScr3
RBFOX1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.154,896,225 - 7,365,137 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366606822,855,140 - 25,753,876 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Rbfox1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248244,550,670 - 5,113,842 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248242,997,980 - 5,113,744 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in RBFOX1
20501 total Variants

Expression


RNA-SEQ Expression
High: > 1000 TPM value   Medium: Between 11 and 1000 TPM
Low: Between 0.5 and 10 TPM   Below Cutoff: < 0.5 TPM

alimentary part of gastrointestinal system circulatory system endocrine system exocrine system hemolymphoid system hepatobiliary system integumental system musculoskeletal system nervous system reproductive system respiratory system adipose tissue
High
Medium 4 6 6
Low 3 1 9 5 6 2
Below cutoff 2 13 6 6 6 1 8 8 6

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_005621565 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005621566 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005621567 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005621568 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005621569 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005621570 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005621571 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005621572 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005621573 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005621574 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_005621575 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014114639 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479207 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479208 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479209 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479210 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479211 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479212 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479213 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540435 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540437 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540438 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540439 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540440 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540441 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540443 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540444 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540445 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540446 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540447 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540448 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540449 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540450 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540451 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038547708 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038547762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038547773 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604533 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604534 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604535 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604536 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604537 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604538 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604539 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604540 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604541 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604542 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604543 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604544 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604545 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604547 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604548 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669221 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669223 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669225 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669226 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669227 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669228 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669229 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669231 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669232 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669233 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669234 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_846368 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSCAFT00000030298   ⟹   ENSCAFP00000028149
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl634,220,648 - 34,400,405 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000030301   ⟹   ENSCAFP00000028152
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl634,220,648 - 34,582,991 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000060425   ⟹   ENSCAFP00000056207
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl635,971,924 - 36,255,384 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000064477   ⟹   ENSCAFP00000058463
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl634,220,648 - 34,556,512 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000066064   ⟹   ENSCAFP00000058603
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl634,222,078 - 36,255,384 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000071982   ⟹   ENSCAFP00000064186
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl634,220,648 - 34,556,512 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000073595   ⟹   ENSCAFP00000044104
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl634,220,648 - 35,264,853 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000083008   ⟹   ENSCAFP00000054944
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl634,220,648 - 34,556,512 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000083927   ⟹   ENSCAFP00000047860
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl634,220,648 - 34,556,512 (-)Ensembl
RefSeq Acc Id: ENSCAFT00000088359   ⟹   ENSCAFP00000058369
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl634,222,078 - 35,649,941 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845027722   ⟹   ENSCAFP00845021817
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl634,422,071 - 34,787,667 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845027775   ⟹   ENSCAFP00845021859
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl634,422,071 - 34,787,667 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845027843   ⟹   ENSCAFP00845021915
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl634,422,071 - 34,760,164 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845027899   ⟹   ENSCAFP00845021960
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl634,422,071 - 34,605,786 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845027914   ⟹   ENSCAFP00845021972
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl634,422,160 - 34,604,795 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845027977   ⟹   ENSCAFP00845022021
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl634,422,220 - 34,760,164 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845028025   ⟹   ENSCAFP00845022052
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl634,422,220 - 34,604,794 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845028084   ⟹   ENSCAFP00845022097
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl634,424,658 - 34,604,795 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845028212   ⟹   ENSCAFP00845022200
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl634,424,984 - 36,456,879 (-)Ensembl
RefSeq Acc Id: ENSCAFT00845028281   ⟹   ENSCAFP00845022252
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl634,424,984 - 35,851,208 (-)Ensembl
RefSeq Acc Id: XM_005621565   ⟹   XP_005621622
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1634,218,276 - 36,255,527 (-)NCBI
Dog10K_Boxer_Tasha635,613,649 - 37,647,209 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005621566   ⟹   XP_005621623
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1634,218,276 - 36,255,525 (-)NCBI
Dog10K_Boxer_Tasha635,613,649 - 37,647,205 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005621567   ⟹   XP_005621624
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1634,218,276 - 36,255,524 (-)NCBI
Dog10K_Boxer_Tasha635,609,952 - 37,647,205 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005621568   ⟹   XP_005621625
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1634,218,276 - 36,255,522 (-)NCBI
Dog10K_Boxer_Tasha635,609,952 - 37,647,201 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005621569   ⟹   XP_005621626
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1634,218,276 - 36,255,529 (-)NCBI
Dog10K_Boxer_Tasha635,613,649 - 37,647,214 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005621570   ⟹   XP_005621627
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1634,218,276 - 36,255,527 (-)NCBI
Dog10K_Boxer_Tasha635,613,682 - 37,647,210 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005621571   ⟹   XP_005621628
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1634,218,276 - 36,255,526 (-)NCBI
Dog10K_Boxer_Tasha635,612,590 - 37,647,208 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005621572   ⟹   XP_005621629
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1634,218,276 - 36,255,524 (-)NCBI
Dog10K_Boxer_Tasha635,609,952 - 37,647,206 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005621574   ⟹   XP_005621631
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1634,218,276 - 34,583,311 (-)NCBI
Dog10K_Boxer_Tasha635,613,649 - 35,975,806 (-)NCBI
Sequence:
RefSeq Acc Id: XM_005621575   ⟹   XP_005621632
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1634,218,276 - 34,556,196 (-)NCBI
Dog10K_Boxer_Tasha635,613,649 - 35,948,636 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014114639   ⟹   XP_013970114
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1634,218,276 - 36,255,526 (-)NCBI
Dog10K_Boxer_Tasha635,613,682 - 37,647,206 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038479207   ⟹   XP_038335135
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1634,222,258 - 36,256,301 (-)NCBI
RefSeq Acc Id: XM_038479208   ⟹   XP_038335136
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1634,222,258 - 36,256,297 (-)NCBI
RefSeq Acc Id: XM_038479209   ⟹   XP_038335137
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1634,222,258 - 36,256,301 (-)NCBI
RefSeq Acc Id: XM_038479210   ⟹   XP_038335138
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1634,218,561 - 36,256,297 (-)NCBI
RefSeq Acc Id: XM_038479211   ⟹   XP_038335139
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1634,218,561 - 36,256,293 (-)NCBI
RefSeq Acc Id: XM_038479212   ⟹   XP_038335140
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1634,222,258 - 36,256,306 (-)NCBI
RefSeq Acc Id: XM_038479213   ⟹   XP_038335141
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1634,222,291 - 36,256,302 (-)NCBI
RefSeq Acc Id: XM_038479214   ⟹   XP_038335142
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1634,222,291 - 36,256,298 (-)NCBI
RefSeq Acc Id: XM_038479215   ⟹   XP_038335143
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1634,221,199 - 36,256,300 (-)NCBI
RefSeq Acc Id: XM_038479216   ⟹   XP_038335144
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1634,218,561 - 36,256,298 (-)NCBI
RefSeq Acc Id: XM_038479217   ⟹   XP_038335145
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1634,222,258 - 34,584,662 (-)NCBI
RefSeq Acc Id: XM_038479218   ⟹   XP_038335146
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1634,222,258 - 35,267,130 (-)NCBI
RefSeq Acc Id: XM_038479219   ⟹   XP_038335147
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1634,222,258 - 35,267,129 (-)NCBI
RefSeq Acc Id: XM_038479220   ⟹   XP_038335148
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1634,222,258 - 34,557,548 (-)NCBI
RefSeq Acc Id: XM_038479221   ⟹   XP_038335149
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1634,218,561 - 34,557,545 (-)NCBI
RefSeq Acc Id: XM_038540435   ⟹   XP_038396363
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0634,516,704 - 36,547,211 (-)NCBI
RefSeq Acc Id: XM_038540437   ⟹   XP_038396365
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0634,516,704 - 36,547,207 (-)NCBI
RefSeq Acc Id: XM_038540438   ⟹   XP_038396366
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0634,516,704 - 36,547,211 (-)NCBI
RefSeq Acc Id: XM_038540439   ⟹   XP_038396367
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0634,513,003 - 36,547,207 (-)NCBI
RefSeq Acc Id: XM_038540440   ⟹   XP_038396368
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0634,513,003 - 36,547,203 (-)NCBI
RefSeq Acc Id: XM_038540441   ⟹   XP_038396369
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0634,516,704 - 36,547,216 (-)NCBI
RefSeq Acc Id: XM_038540443   ⟹   XP_038396371
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0634,516,737 - 36,547,212 (-)NCBI
RefSeq Acc Id: XM_038540444   ⟹   XP_038396372
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0634,516,737 - 36,547,208 (-)NCBI
RefSeq Acc Id: XM_038540445   ⟹   XP_038396373
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0634,515,645 - 36,547,210 (-)NCBI
RefSeq Acc Id: XM_038540446   ⟹   XP_038396374
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0634,513,003 - 36,547,208 (-)NCBI
RefSeq Acc Id: XM_038540447   ⟹   XP_038396375
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0634,516,704 - 34,878,874 (-)NCBI
RefSeq Acc Id: XM_038540448   ⟹   XP_038396376
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0634,516,704 - 35,559,457 (-)NCBI
RefSeq Acc Id: XM_038540449   ⟹   XP_038396377
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0634,516,704 - 35,559,456 (-)NCBI
RefSeq Acc Id: XM_038540450   ⟹   XP_038396378
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0634,516,704 - 34,851,733 (-)NCBI
RefSeq Acc Id: XM_038540451   ⟹   XP_038396379
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0634,513,003 - 34,851,730 (-)NCBI
RefSeq Acc Id: XM_038547708   ⟹   XP_038403636
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha635,613,649 - 37,647,209 (-)NCBI
RefSeq Acc Id: XM_038547762   ⟹   XP_038403690
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha635,613,649 - 36,657,709 (-)NCBI
RefSeq Acc Id: XM_038547773   ⟹   XP_038403701
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha635,613,649 - 36,657,708 (-)NCBI
RefSeq Acc Id: XM_038604533   ⟹   XP_038460461
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0634,094,565 - 36,147,041 (-)NCBI
RefSeq Acc Id: XM_038604534   ⟹   XP_038460462
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0634,094,565 - 36,147,037 (-)NCBI
RefSeq Acc Id: XM_038604535   ⟹   XP_038460463
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0634,094,565 - 36,147,041 (-)NCBI
RefSeq Acc Id: XM_038604536   ⟹   XP_038460464
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0634,090,868 - 36,147,037 (-)NCBI
RefSeq Acc Id: XM_038604537   ⟹   XP_038460465
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0634,090,868 - 36,147,033 (-)NCBI
RefSeq Acc Id: XM_038604538   ⟹   XP_038460466
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0634,094,565 - 36,147,046 (-)NCBI
RefSeq Acc Id: XM_038604539   ⟹   XP_038460467
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0634,094,598 - 36,147,042 (-)NCBI
RefSeq Acc Id: XM_038604540   ⟹   XP_038460468
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0634,094,598 - 36,147,038 (-)NCBI
RefSeq Acc Id: XM_038604541   ⟹   XP_038460469
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0634,093,506 - 36,147,040 (-)NCBI
RefSeq Acc Id: XM_038604542   ⟹   XP_038460470
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0634,090,868 - 36,147,038 (-)NCBI
RefSeq Acc Id: XM_038604543   ⟹   XP_038460471
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0634,094,565 - 34,463,338 (-)NCBI
RefSeq Acc Id: XM_038604544   ⟹   XP_038460472
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0634,094,565 - 35,150,696 (-)NCBI
RefSeq Acc Id: XM_038604545   ⟹   XP_038460473
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0634,094,565 - 35,150,695 (-)NCBI
RefSeq Acc Id: XM_038604547   ⟹   XP_038460475
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0634,094,565 - 34,436,177 (-)NCBI
RefSeq Acc Id: XM_038604548   ⟹   XP_038460476
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0634,090,868 - 34,436,174 (-)NCBI
RefSeq Acc Id: XM_038669219   ⟹   XP_038525147
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0634,424,879 - 36,456,825 (-)NCBI
RefSeq Acc Id: XM_038669220   ⟹   XP_038525148
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0634,424,879 - 36,456,821 (-)NCBI
RefSeq Acc Id: XM_038669221   ⟹   XP_038525149
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0634,424,879 - 36,456,825 (-)NCBI
RefSeq Acc Id: XM_038669222   ⟹   XP_038525150
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0634,421,178 - 36,456,821 (-)NCBI
RefSeq Acc Id: XM_038669223   ⟹   XP_038525151
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0634,421,178 - 36,456,817 (-)NCBI
RefSeq Acc Id: XM_038669224   ⟹   XP_038525152
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0634,424,879 - 36,456,830 (-)NCBI
RefSeq Acc Id: XM_038669225   ⟹   XP_038525153
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0634,424,912 - 36,456,826 (-)NCBI
RefSeq Acc Id: XM_038669226   ⟹   XP_038525154
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0634,424,912 - 36,456,822 (-)NCBI
RefSeq Acc Id: XM_038669227   ⟹   XP_038525155
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0634,423,820 - 36,456,824 (-)NCBI
RefSeq Acc Id: XM_038669228   ⟹   XP_038525156
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0634,421,178 - 36,456,822 (-)NCBI
RefSeq Acc Id: XM_038669229   ⟹   XP_038525157
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0634,424,879 - 34,787,584 (-)NCBI
RefSeq Acc Id: XM_038669231   ⟹   XP_038525159
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0634,424,879 - 35,469,093 (-)NCBI
RefSeq Acc Id: XM_038669232   ⟹   XP_038525160
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0634,424,879 - 35,469,092 (-)NCBI
RefSeq Acc Id: XM_038669233   ⟹   XP_038525161
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0634,424,879 - 34,760,418 (-)NCBI
RefSeq Acc Id: XM_038669234   ⟹   XP_038525162
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0634,421,178 - 34,760,415 (-)NCBI
RefSeq Acc Id: XM_846368   ⟹   XP_851461
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1634,218,276 - 34,556,178 (-)NCBI
Dog10K_Boxer_Tasha635,609,952 - 35,948,633 (-)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_005621622 (Get FASTA)   NCBI Sequence Viewer  
  XP_005621623 (Get FASTA)   NCBI Sequence Viewer  
  XP_005621624 (Get FASTA)   NCBI Sequence Viewer  
  XP_005621625 (Get FASTA)   NCBI Sequence Viewer  
  XP_005621626 (Get FASTA)   NCBI Sequence Viewer  
  XP_005621627 (Get FASTA)   NCBI Sequence Viewer  
  XP_005621628 (Get FASTA)   NCBI Sequence Viewer  
  XP_005621629 (Get FASTA)   NCBI Sequence Viewer  
  XP_005621631 (Get FASTA)   NCBI Sequence Viewer  
  XP_005621632 (Get FASTA)   NCBI Sequence Viewer  
  XP_013970114 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335135 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335136 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335137 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335138 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335139 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335140 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335141 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335142 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335143 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335144 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335145 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335146 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335147 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335148 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335149 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396363 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396365 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396366 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396367 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396368 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396369 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396371 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396372 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396373 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396374 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396375 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396376 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396377 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396378 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396379 (Get FASTA)   NCBI Sequence Viewer  
  XP_038403636 (Get FASTA)   NCBI Sequence Viewer  
  XP_038403690 (Get FASTA)   NCBI Sequence Viewer  
  XP_038403701 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460461 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460462 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460463 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460464 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460465 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460466 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460467 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460468 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460469 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460470 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460471 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460472 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460473 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460475 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460476 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525147 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525148 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525149 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525150 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525151 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525152 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525153 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525154 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525155 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525156 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525157 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525159 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525160 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525161 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525162 (Get FASTA)   NCBI Sequence Viewer  
  XP_851461 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000028149.5
  ENSCAFP00000028152.5
  ENSCAFP00000044104.2
  ENSCAFP00000047860.1
  ENSCAFP00000054944.2
  ENSCAFP00000058369.1
  ENSCAFP00000058463.2
  ENSCAFP00000058603.1
  ENSCAFP00000064186.2
  ENSCAFP00000071062.1
  ENSCAFP00030011836.1
  ENSCAFP00030012590.1
  ENSCAFP00040015966.1
  ENSCAFP00845021817.1
  ENSCAFP00845021859.1
  ENSCAFP00845021915.1
  ENSCAFP00845021960.1
  ENSCAFP00845021972.1
  ENSCAFP00845022021
  ENSCAFP00845022021.1
  ENSCAFP00845022052
  ENSCAFP00845022052.1
  ENSCAFP00845022097.1
  ENSCAFP00845022200
  ENSCAFP00845022200.1
  ENSCAFP00845022252.1
Reference Protein Sequences
RefSeq Acc Id: XP_005621629   ⟸   XM_005621572
- Peptide Label: isoform X10
- Sequence:
RefSeq Acc Id: XP_005621624   ⟸   XM_005621567
- Peptide Label: isoform X4
- Sequence:
RefSeq Acc Id: XP_005621625   ⟸   XM_005621568
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_851461   ⟸   XM_846368
- Peptide Label: isoform X15
- UniProtKB: A0A8I3NXY3 (UniProtKB/TrEMBL),   A0A8P0NXW4 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005621626   ⟸   XM_005621569
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_005621627   ⟸   XM_005621570
- Peptide Label: isoform X7
- Sequence:
RefSeq Acc Id: XP_005621622   ⟸   XM_005621565
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHJ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013970114   ⟸   XM_014114639
- Peptide Label: isoform X8
- Sequence:
RefSeq Acc Id: XP_005621623   ⟸   XM_005621566
- Peptide Label: isoform X2
- UniProtKB: A0A8I3NYU8 (UniProtKB/TrEMBL),   A0A8P0P7T1 (UniProtKB/TrEMBL),   A0A8C0MHJ9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005621631   ⟸   XM_005621574
- Peptide Label: isoform X11
- UniProtKB: A0A8C0S5G2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005621632   ⟸   XM_005621575
- Peptide Label: isoform X14
- UniProtKB: A0A8C0RF15 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_005621628   ⟸   XM_005621571
- Peptide Label: isoform X9
- Sequence:
RefSeq Acc Id: ENSCAFP00000028152   ⟸   ENSCAFT00000030301
RefSeq Acc Id: ENSCAFP00000028149   ⟸   ENSCAFT00000030298
RefSeq Acc Id: ENSCAFP00000058369   ⟸   ENSCAFT00000088359
RefSeq Acc Id: ENSCAFP00000058463   ⟸   ENSCAFT00000064477
RefSeq Acc Id: ENSCAFP00000056207   ⟸   ENSCAFT00000060425
RefSeq Acc Id: ENSCAFP00000054944   ⟸   ENSCAFT00000083008
RefSeq Acc Id: ENSCAFP00000044104   ⟸   ENSCAFT00000073595
RefSeq Acc Id: ENSCAFP00000047860   ⟸   ENSCAFT00000083927
RefSeq Acc Id: ENSCAFP00000064186   ⟸   ENSCAFT00000071982
RefSeq Acc Id: ENSCAFP00000058603   ⟸   ENSCAFT00000066064
RefSeq Acc Id: XP_038335144   ⟸   XM_038479216
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038335138   ⟸   XM_038479210
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038335139   ⟸   XM_038479211
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038335149   ⟸   XM_038479221
- Peptide Label: isoform X15
RefSeq Acc Id: XP_038335143   ⟸   XM_038479215
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038335140   ⟸   XM_038479212
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038335137   ⟸   XM_038479209
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038335135   ⟸   XM_038479207
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038335136   ⟸   XM_038479208
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038335146   ⟸   XM_038479218
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038335147   ⟸   XM_038479219
- Peptide Label: isoform X13
RefSeq Acc Id: XP_038335145   ⟸   XM_038479217
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038335148   ⟸   XM_038479220
- Peptide Label: isoform X14
RefSeq Acc Id: XP_038335141   ⟸   XM_038479213
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038335142   ⟸   XM_038479214
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038460470   ⟸   XM_038604542
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038460464   ⟸   XM_038604536
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038460465   ⟸   XM_038604537
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038460476   ⟸   XM_038604548
- Peptide Label: isoform X15
RefSeq Acc Id: XP_038460469   ⟸   XM_038604541
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038460466   ⟸   XM_038604538
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038460463   ⟸   XM_038604535
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038460461   ⟸   XM_038604533
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038460462   ⟸   XM_038604534
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038460472   ⟸   XM_038604544
- Peptide Label: isoform X12
RefSeq Acc Id: XP_038460473   ⟸   XM_038604545
- Peptide Label: isoform X13
RefSeq Acc Id: XP_038460471   ⟸   XM_038604543
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038460475   ⟸   XM_038604547
- Peptide Label: isoform X14
RefSeq Acc Id: XP_038460467   ⟸   XM_038604539
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038460468   ⟸   XM_038604540
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038525156   ⟸   XM_038669228
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038525150   ⟸   XM_038669222
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038525151   ⟸   XM_038669223
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038525162   ⟸   XM_038669234
- Peptide Label: isoform X15
- UniProtKB: A0A8I3NXY3 (UniProtKB/TrEMBL),   A0A8P0NXW4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525155   ⟸   XM_038669227
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038525152   ⟸   XM_038669224
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038525149   ⟸   XM_038669221
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038525147   ⟸   XM_038669219
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHJ9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525148   ⟸   XM_038669220
- Peptide Label: isoform X2
- UniProtKB: A0A8I3NYU8 (UniProtKB/TrEMBL),   A0A8P0P7T1 (UniProtKB/TrEMBL),   A0A8C0MHJ9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525159   ⟸   XM_038669231
- Peptide Label: isoform X12
- UniProtKB: A0A8C0MHJ9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525160   ⟸   XM_038669232
- Peptide Label: isoform X13
- UniProtKB: A0A8C0MHJ9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525157   ⟸   XM_038669229
- Peptide Label: isoform X11
- UniProtKB: A0A8C0S5G2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525161   ⟸   XM_038669233
- Peptide Label: isoform X14
- UniProtKB: A0A8C0RF15 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525153   ⟸   XM_038669225
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038525154   ⟸   XM_038669226
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038403636   ⟸   XM_038547708
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038403690   ⟸   XM_038547762
- Peptide Label: isoform X12
- UniProtKB: A0A8C0MHJ9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038403701   ⟸   XM_038547773
- Peptide Label: isoform X13
- UniProtKB: A0A8C0MHJ9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396374   ⟸   XM_038540446
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038396367   ⟸   XM_038540439
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038396368   ⟸   XM_038540440
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038396379   ⟸   XM_038540451
- Peptide Label: isoform X15
- UniProtKB: A0A8I3NXY3 (UniProtKB/TrEMBL),   A0A8P0NXW4 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396373   ⟸   XM_038540445
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038396369   ⟸   XM_038540441
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038396366   ⟸   XM_038540438
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038396363   ⟸   XM_038540435
- Peptide Label: isoform X1
- UniProtKB: A0A8C0MHJ9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396365   ⟸   XM_038540437
- Peptide Label: isoform X2
- UniProtKB: A0A8C0MHJ9 (UniProtKB/TrEMBL),   A0A8I3NYU8 (UniProtKB/TrEMBL),   A0A8P0P7T1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396376   ⟸   XM_038540448
- Peptide Label: isoform X12
- UniProtKB: A0A8C0MHJ9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396377   ⟸   XM_038540449
- Peptide Label: isoform X13
- UniProtKB: A0A8C0MHJ9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396375   ⟸   XM_038540447
- Peptide Label: isoform X11
- UniProtKB: A0A8C0S5G2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396378   ⟸   XM_038540450
- Peptide Label: isoform X14
- UniProtKB: A0A8C0RF15 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396371   ⟸   XM_038540443
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038396372   ⟸   XM_038540444
- Peptide Label: isoform X8
RefSeq Acc Id: ENSCAFP00845022021   ⟸   ENSCAFT00845027977
RefSeq Acc Id: ENSCAFP00845022097   ⟸   ENSCAFT00845028084
RefSeq Acc Id: ENSCAFP00845022052   ⟸   ENSCAFT00845028025
RefSeq Acc Id: ENSCAFP00845021817   ⟸   ENSCAFT00845027722
RefSeq Acc Id: ENSCAFP00845021960   ⟸   ENSCAFT00845027899
RefSeq Acc Id: ENSCAFP00845022252   ⟸   ENSCAFT00845028281
RefSeq Acc Id: ENSCAFP00845021915   ⟸   ENSCAFT00845027843
RefSeq Acc Id: ENSCAFP00845022200   ⟸   ENSCAFT00845028212
RefSeq Acc Id: ENSCAFP00845021859   ⟸   ENSCAFT00845027775
RefSeq Acc Id: ENSCAFP00845021972   ⟸   ENSCAFT00845027914
Protein Domains
RRM


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000019082 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030006505 UniProtKB/TrEMBL
  ENSCAFG00040009366 UniProtKB/TrEMBL
  ENSCAFG00845014550 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000030298.5 UniProtKB/TrEMBL
  ENSCAFT00000030301.6 UniProtKB/TrEMBL
  ENSCAFT00000064477.2 UniProtKB/TrEMBL
  ENSCAFT00000066064.2 UniProtKB/TrEMBL
  ENSCAFT00000071982.2 UniProtKB/TrEMBL
  ENSCAFT00000073595.2 UniProtKB/TrEMBL
  ENSCAFT00000083008.2 UniProtKB/TrEMBL
  ENSCAFT00000083927.2 UniProtKB/TrEMBL
  ENSCAFT00000088359.2 UniProtKB/TrEMBL
  ENSCAFT00000098381.1 UniProtKB/TrEMBL
  ENSCAFT00030013563.1 UniProtKB/TrEMBL
  ENSCAFT00030014438.1 UniProtKB/TrEMBL
  ENSCAFT00040018383.1 UniProtKB/TrEMBL
  ENSCAFT00845027722.1 UniProtKB/TrEMBL
  ENSCAFT00845027775.1 UniProtKB/TrEMBL
  ENSCAFT00845027843.1 UniProtKB/TrEMBL
  ENSCAFT00845027899.1 UniProtKB/TrEMBL
  ENSCAFT00845027914.1 UniProtKB/TrEMBL
  ENSCAFT00845027977 ENTREZGENE
  ENSCAFT00845027977.1 UniProtKB/TrEMBL
  ENSCAFT00845028025 ENTREZGENE
  ENSCAFT00845028025.1 UniProtKB/TrEMBL
  ENSCAFT00845028084.1 UniProtKB/TrEMBL
  ENSCAFT00845028212 ENTREZGENE
  ENSCAFT00845028212.1 UniProtKB/TrEMBL
  ENSCAFT00845028281.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.70.330 UniProtKB/TrEMBL
InterPro Fox-1_C_dom UniProtKB/TrEMBL
  FOX1_RRM UniProtKB/TrEMBL
  Nucleotide-bd_a/b_plait_sf UniProtKB/TrEMBL
  RBD_domain_sf UniProtKB/TrEMBL
  RBFOX1-like UniProtKB/TrEMBL
  RNA-bd_Fox-1 UniProtKB/TrEMBL
  RRM_dom UniProtKB/TrEMBL
NCBI Gene RBFOX1 ENTREZGENE
PANTHER ATAXIN 2-BINDING PROTEIN 1-RELATED UniProtKB/TrEMBL
  RNA BINDING PROTEIN FOX-1 HOMOLOG 1 UniProtKB/TrEMBL
  RNA BINDING PROTEIN FOX-1 HOMOLOG 1 UniProtKB/TrEMBL
Pfam Fox-1_C UniProtKB/TrEMBL
  RRM_1 UniProtKB/TrEMBL
PIRSF Ataxin_2_bd_A2BP UniProtKB/TrEMBL
PROSITE RRM UniProtKB/TrEMBL
SMART RRM UniProtKB/TrEMBL
Superfamily-SCOP SSF54928 UniProtKB/TrEMBL
UniProt A0A8C0MHJ9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0RF15 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0S5G2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NNY9_CANLF UniProtKB/TrEMBL
  A0A8I3NSQ4_CANLF UniProtKB/TrEMBL
  A0A8I3NSR2_CANLF UniProtKB/TrEMBL
  A0A8I3NXJ9_CANLF UniProtKB/TrEMBL
  A0A8I3NXY3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3NYU8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3P0N4_CANLF UniProtKB/TrEMBL
  A0A8I3P699_CANLF UniProtKB/TrEMBL
  A0A8I3RYW8_CANLF UniProtKB/TrEMBL
  A0A8I3RYZ0_CANLF UniProtKB/TrEMBL
  A0A8P0NJX8_CANLF UniProtKB/TrEMBL
  A0A8P0NK38_CANLF UniProtKB/TrEMBL
  A0A8P0NXW4 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0P4H8_CANLF UniProtKB/TrEMBL
  A0A8P0P7I7_CANLF UniProtKB/TrEMBL
  A0A8P0P7K7_CANLF UniProtKB/TrEMBL
  A0A8P0P7T1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0PCU3_CANLF UniProtKB/TrEMBL
  A0A8P0PKW0_CANLF UniProtKB/TrEMBL
  A0A8P0SXC8_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:45398 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-09-26 RBFOX1  RNA binding fox-1 homolog 1    RNA binding protein, fox-1 homolog 1  Symbol and/or name change 5135510 APPROVED