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Gene: TXLNB (taxilin beta) Canis lupus familiaris

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Symbol:

TXLNB

Name:

taxilin beta

RGD ID:

12302478

Description:

ENCODES a protein that exhibits syntaxin binding (inferred); ASSOCIATED WITH Familial Behcet-Like Autoinflammatory Syndrome (ortholog); FOUND IN cytoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

beta-taxilin

RGD Orthologs

Alliance Orthologs

More Info

more info ...

More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TXLNB (taxilin beta)	HGNC	EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):	Txlnb (taxilin beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Txlnb (taxilin beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Txlnb (taxilin beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):	TXLNB (taxilin beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Txlnb (taxilin beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TXLNB (taxilin beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	TXLNB (taxilin beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Txlnb (taxilin beta)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	31,417,182 - 31,464,674 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	31,417,538 - 31,464,624 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	32,288,265 - 32,338,086 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	31,575,856 - 31,625,741 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	31,575,904 - 31,625,667 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	31,451,654 - 31,501,470 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	31,334,143 - 31,384,048 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	31,645,609 - 31,695,514 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Familial Behcet-Like Autoinflammatory Syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Cellular Component

cytoplasm (IEA)

Molecular Function

protein binding (ISO)

syntaxin binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

TXLNB
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	1	31,417,182 - 31,464,674 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	1	31,417,538 - 31,464,624 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	1	32,288,265 - 32,338,086 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	1	31,575,856 - 31,625,741 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	1	31,575,904 - 31,625,667 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	1	31,451,654 - 31,501,470 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	1	31,334,143 - 31,384,048 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	1	31,645,609 - 31,695,514 (-)	NCBI		UU_Cfam_GSD_1.0

TXLNB
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	6	139,159,162 - 139,323,950 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	6	139,239,083 - 139,291,998 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	6	139,561,198 - 139,613,135 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	6	139,602,891 - 139,654,849 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	6	139,602,893 - 139,654,849	NCBI
Celera	6	140,301,267 - 140,353,271 (-)	NCBI		Celera
Cytogenetic Map	6	q24.1	NCBI
HuRef	6	137,122,735 - 137,174,737 (-)	NCBI		HuRef
CHM1_1	6	139,824,342 - 139,876,297 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	6	140,347,705 - 140,507,844 (-)	NCBI		T2T-CHM13v2.0

Txlnb
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	10	17,671,967 - 17,721,411 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	10	17,671,974 - 17,721,413 (+)	Ensembl		GRCm39 Ensembl
GRCm38	10	17,796,219 - 17,845,663 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	10	17,796,226 - 17,845,665 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	10	17,516,025 - 17,565,469 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	10	17,485,696 - 17,535,079 (+)	NCBI		MGSCv36	mm8
Celera	10	17,679,390 - 17,728,131 (+)	NCBI		Celera
Cytogenetic Map	10	A2	NCBI
cM Map	10	7.24	NCBI

Txlnb
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	14,224,647 - 14,269,837 (+)	NCBI		GRCr8
mRatBN7.2	1	12,404,845 - 12,449,977 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	12,404,859 - 12,449,975 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	12,167,527 - 12,213,188 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	18,169,452 - 18,215,113 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	12,385,196 - 12,430,312 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	12,915,781 - 12,961,680 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	12,915,734 - 12,961,670 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	14,609,469 - 14,655,264 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	12,814,809 - 12,857,077 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	12,753,057 - 12,856,515 (+)	NCBI
Celera	1	10,862,671 - 10,907,830 (+)	NCBI		Celera
Cytogenetic Map	1	p12	NCBI

Txlnb
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955436	20,445,205 - 20,482,523 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955436	20,442,605 - 20,481,758 (+)	NCBI	ChiLan1.0	ChiLan1.0

TXLNB
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	5	159,208,553 - 159,293,118 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	6	157,102,881 - 157,186,505 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	6	137,002,343 - 137,086,487 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	6	141,083,798 - 141,133,794 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	6	141,084,075 - 141,130,691 (-)	Ensembl	panpan1.1		panPan2

Txlnb
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404946	126,472,022 - 126,513,407 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936560	6,251,213 - 6,292,598 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936560	6,253,195 - 6,292,556 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TXLNB
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	1	25,228,615 - 25,285,301 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	1	25,228,602 - 25,285,303 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	1	28,367,688 - 28,425,410 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

TXLNB
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	13	34,099,200 - 34,151,823 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	13	34,099,435 - 34,151,823 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	6,241,641 - 6,291,264 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Txlnb
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624753	14,712,569 - 14,761,243 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624753	14,712,618 - 14,759,830 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in TXLNB
521 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_038465552	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038526191	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038590480	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038654311	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_533429	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000001	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000000441 ⟹ ENSCAFP00000000403

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	31,417,538 - 31,464,624 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00000077315 ⟹ ENSCAFP00000054447

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	1	31,417,538 - 31,464,624 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845018770 ⟹ ENSCAFP00845014655

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	1	31,575,904 - 31,625,667 (-)	Ensembl

RefSeq Acc Id:

XM_038465552 ⟹ XP_038321480

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	1	31,451,654 - 31,501,470 (-)	NCBI

RefSeq Acc Id:

XM_038526191 ⟹ XP_038382119

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	1	31,645,609 - 31,695,514 (-)	NCBI

RefSeq Acc Id:

XM_038590480 ⟹ XP_038446408

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	1	31,334,143 - 31,384,048 (-)	NCBI

RefSeq Acc Id:

XM_038654311 ⟹ XP_038510239

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	1	31,575,856 - 31,625,741 (-)	NCBI

RefSeq Acc Id:

XM_533429 ⟹ XP_533429

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	31,417,182 - 31,464,674 (-)	NCBI
Dog10K_Boxer_Tasha	1	32,288,265 - 32,338,086 (-)	NCBI

Sequence:

show sequence

GTGTGTGTGTGTGTGTGTGGTTTCTCTCTCTCCCTTGTAAGAACACAGCTGCCTGTCCCCTGCT
GTCACCGCTCCTCTGACTAGCTTCTTGCTGCCTCTTGCCTCTCCTTTCTGCTTAGCTCCCTGTC
TTCTGATACATCTCCCAGTATGGAGATGAATCATTCTGTGCAGCTCTCAGGGGAACCCCAGTCA
ACACCTCCAGGAGACAGTTCATCATTACCCAGTCAAAATGGCTTGGAGAAGCAAGATGATAAGG
ATTCCTCAACCTCACTCCAAGCACCAGAAGGGATAGCAGGTGTGCAGTCTAAACAGGGAGCTCA
TGATATCTCTGAGGAGTTGAATCGACAACTGGAAGACATCATTAACACCTATGGGTCTGCTACT
GAAAAAGAGGGTCCCACCAAGGCAAAGGAGCAGCCTGAGAACACAGAACCACCCGACAATGAGG
ATGGGGACTGTGATGAGGCCACTGAAGAGACTGACAGAGAACCCATGGCTTCTGGAGAGCTGGC
CACAGCCAAAGAACCTATCAGCAATAAAGAGCAAAAATTGGAAAAGAAAATCCTAAAAGGATTA
GGCAAAGAAGCCAACCTGCTAATGCAAAATCTGAACAAGTTGCAAACACCTGAAGAAAAACTTG
ATTTTTTATTCAAGAAGTATGCTGAATTGCTGGATGAGCATCGCACTGAGCAAAAGAAGTTAAA
GTTCTTACAAAAGAAACAGGTACAAATCCAAAAAGAAAAAGACCAGTTACAAAGTGAACACAGC
AGAGCTATCCTTGCTCGAAGCAAACTGGAGAGTCTATGCCGGGAGTTGCAGAGACACAACAAGA
CACTGAAGGAGGAAACCCTTCAGCGAGCACGTGAGGAAGAAGAGAAGAGGAAGGAGATCACCAG
TCACTTTCAGACCACTCTGACAGATATCCAGGCACAGATTGAACAGCAGAGTGAGCGAAATATG
AAGCTGTGTCAGGAGAACACAGAGCTTGCAGAGAAACTGAAAAGCATCATTGATCAGTATGAGC
TCAGAGAGGAGCATCTGGACAAAATATTTAAACACAGAGAACTGCAACAGAAGCTGGTGGATGC
AAAGCTCGAACAGGCACAAGAGATGATGAAGGAAGCCGAGGAGCGACACAAACGTGAAAAGGAA
TATTTGCTGAACCAGGCAGCAGAGTGGAAACTTCAGGCCAAAGTACTGAAGGAACAAGAGACAG
TCCTGCAGGCTCAGCTTACCCTCTACTCTGGAAGGTTTGAAGAGTTCCAGAACACACTAACAAA
AAGCAATGAGGTGTTTGCCACTTTCAAACAGGAAATGGATAAAACAACTAAGAAAATGAAGAAG
CTGGAGAAGGACACAGCCACGTGGAAAGCTCGGTTCGAAAACTGTAACAAAGCTCTGCTAGACA
TGATAGAAGAGAAAGCGCTGAGAGCTAAAGAATATGAGTGCTTCGTGATGAAAATTGGGAGGCT
GGAGAACCTCTGTCGAGCTTTACAAGAAGAGAGAAATGAACTCTACAAAAAAATTAGAGACGCA
AAAATGCCTGAAAGGGATGACCAAAGTCAGCACACCTCCGACGAAGAGCCCGAGTCTGCTGTGT
CTGGGGGGGCAGGGGTTGATGCCGAGGAAGTCAGTAGTGTTCACAATGCTGTGAAAAATCTGGC
CACAGTCTTCATGGCCATTCATCATCCAGAGTCGACCCTTAACCAGTCCAAAGAAATCCAACCA
GAATGTGGCAGTCCTCAAGAGGGTGGTGACTCGGCCCCCAAGGAGCCAGAACAATCCTCTCTGG
GCCCTTTATGTCATTCAGAGAGTTCCCTGCCTCCCCTAACTCCTCAGGCTGAAGCCAGAATTGG
CAATGAGGCAGAAGTGCCTCCCAAGCCCAGTAATCCCCCCGTGGGGTGGGGAGCAGAGGCCCAA
GACTGGGGTCTCTTTGCAGCAGCCCAAGCTGATCAGCAGCCCCAGAAGCCAGAGGCAAAAGCTT
CCAGTCAGACCCCACAGTCCCCAGCTGAGGCTTCCCTACCAGTGATGGAGGAAAGTGGTCCTGC
TCCACCACCCACAGCAGGTGAGCCAATTCCACCTGAGGTGCTTGCATGTGGGCCCAGTGGGCCG
CCACCACCACTGGAAGAAGCAGCAGAGGGGCTACCAGGAGGGCCCTCAGTGGGGCCTGGACAGC
CCCCAGTGGCCGACACCAACCTGGAAGGAGTAGACTAAGCCTCATGGTGCCTTCGGAAGCTATT
CTCCCTGACTTTACATTTTCATCATAAGACTGTCTTCTGAAGAGGCGCTAAGGGCTAGAGATGT
CTAAGGGAAGAGACTTAATTAGAATCAAGACATTTTTAAATGTTATGCAGAGCACATTCAGCCT
GTGCTATTTGTTCTCAATTTATAACTGATTTGGAGCTTTTCTGTGTAACGGATTGACAGTATAA
TTTTCCCAAATGGCAACAAAACACACAGATAGGAAATTCCTACTAATTTTCCATTGAGATGGTA
TTTATTTCAATTTCTTAATCAGCAGTAAGATTTGGTGTTTCAGGACTCCCACTATAATATATAA
ATATAGAAAA

hide sequence

Protein Sequences


Protein RefSeqs	XP_038321480	(Get FASTA)	NCBI Sequence Viewer
	XP_038382119	(Get FASTA)	NCBI Sequence Viewer
	XP_038446408	(Get FASTA)	NCBI Sequence Viewer
	XP_038510239	(Get FASTA)	NCBI Sequence Viewer
	XP_533429	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000000403.4
	ENSCAFP00030001933.1
	ENSCAFP00030001945.1
	ENSCAFP00030001960.1
	ENSCAFP00040004421.1
	ENSCAFP00040004436.1
	ENSCAFP00845014655
	ENSCAFP00845014655.1

RefSeq Acc Id:

XP_533429 ⟸ XM_533429

- UniProtKB:

A0A8C0LGJ5 (UniProtKB/TrEMBL), A0A8C0M4H2 (UniProtKB/TrEMBL), A0A8I3N573 (UniProtKB/TrEMBL), A0A8P0S6M4 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MEMNHSVQLSGEPQSTPPGDSSSLPSQNGLEKQDDKDSSTSLQAPEGIAGVQSKQGAHDISEEL
NRQLEDIINTYGSATEKEGPTKAKEQPENTEPPDNEDGDCDEATEETDREPMASGELATAKEPI
SNKEQKLEKKILKGLGKEANLLMQNLNKLQTPEEKLDFLFKKYAELLDEHRTEQKKLKFLQKKQ
VQIQKEKDQLQSEHSRAILARSKLESLCRELQRHNKTLKEETLQRAREEEEKRKEITSHFQTTL
TDIQAQIEQQSERNMKLCQENTELAEKLKSIIDQYELREEHLDKIFKHRELQQKLVDAKLEQAQ
EMMKEAEERHKREKEYLLNQAAEWKLQAKVLKEQETVLQAQLTLYSGRFEEFQNTLTKSNEVFA
TFKQEMDKTTKKMKKLEKDTATWKARFENCNKALLDMIEEKALRAKEYECFVMKIGRLENLCRA
LQEERNELYKKIRDAKMPERDDQSQHTSDEEPESAVSGGAGVDAEEVSSVHNAVKNLATVFMAI
HHPESTLNQSKEIQPECGSPQEGGDSAPKEPEQSSLGPLCHSESSLPPLTPQAEARIGNEAEVP
PKPSNPPVGWGAEAQDWGLFAAAQADQQPQKPEAKASSQTPQSPAEASLPVMEESGPAPPPTAG
EPIPPEVLACGPSGPPPPLEEAAEGLPGGPSVGPGQPPVADTNLEGVD

hide sequence

Ensembl Acc Id:

ENSCAFP00000054447 ⟸ ENSCAFT00000077315

Ensembl Acc Id:

ENSCAFP00000000403 ⟸ ENSCAFT00000000441

RefSeq Acc Id:

XP_038321480 ⟸ XM_038465552

RefSeq Acc Id:

XP_038446408 ⟸ XM_038590480

RefSeq Acc Id:	XP_038510239 ⟸ XM_038654311
- UniProtKB:	A0A8C0LGJ5 (UniProtKB/TrEMBL), A0A8C0M4H2 (UniProtKB/TrEMBL), A0A8I3N573 (UniProtKB/TrEMBL), A0A8P0S6M4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038382119 ⟸ XM_038526191
- UniProtKB:	A0A8C0LGJ5 (UniProtKB/TrEMBL), A0A8C0M4H2 (UniProtKB/TrEMBL), A0A8I3N573 (UniProtKB/TrEMBL), A0A8P0S6M4 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845014655 ⟸ ENSCAFT00845018770

Promoters

RGD ID:

13681983

Promoter ID:

EPDNEW_C51

Type:

initiation region

Name:

TXLNB_1

Description:

taxilin beta

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	1	31,464,607 - 31,464,667	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000000283	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030001248	UniProtKB/TrEMBL
	ENSCAFG00040002700	UniProtKB/TrEMBL
	ENSCAFG00845010652	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000000441.5	UniProtKB/TrEMBL
	ENSCAFT00030002186.1	UniProtKB/TrEMBL
	ENSCAFT00030002199.1	UniProtKB/TrEMBL
	ENSCAFT00030002216.1	UniProtKB/TrEMBL
	ENSCAFT00040005138.1	UniProtKB/TrEMBL
	ENSCAFT00040005158.1	UniProtKB/TrEMBL
	ENSCAFT00845018770	ENTREZGENE
	ENSCAFT00845018770.1	UniProtKB/TrEMBL
InterPro	Taxilin_fam	UniProtKB/TrEMBL
KEGG Report	cfa:476224	UniProtKB/TrEMBL
NCBI Gene	TXLNB	ENTREZGENE
PANTHER	BETA-TAXILIN	UniProtKB/TrEMBL
	PTHR16127	UniProtKB/TrEMBL
Pfam	Taxilin	UniProtKB/TrEMBL
UniProt	A0A8C0LGJ5	ENTREZGENE
	A0A8C0LZS1_CANLF	UniProtKB/TrEMBL
	A0A8C0M4H2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0PZL3_CANLF	UniProtKB/TrEMBL
	A0A8I3N573	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0S6M4	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:48007	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar