MIR192 (microRNA mir-192) - Rat Genome Database

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Gene: MIR192 (microRNA mir-192) Canis lupus familiaris
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Symbol: MIR192
Name: microRNA mir-192 (Ensembl:microRNA 192)
RGD ID: 12283515
Description: microRNAs (miRNAs) are short (20-24 nt) non-coding RNAs that are involved in post-transcriptional regulation of gene expression in multicellular organisms by affecting both the stability and translation of mRNAs. miRNAs are transcribed by RNA polymerase II as part of capped and polyadenylated primary transcripts (pri-miRNAs) that can be either protein-coding or non-coding. The primary transcript is cleaved by the Drosha ribonuclease III enzyme to produce an approximately 70-nt stem-loop precursor miRNA (pre-miRNA), which is further cleaved by the cytoplasmic Dicer ribonuclease to generate the mature miRNA and antisense miRNA star (miRNA*) products. The mature miRNA is incorporated into a RNA-induced silencing complex (RISC), which recognizes target mRNAs through imperfect base pairing with the miRNA and most commonly results in translational inhibition or destabilization of the target mRNA. The RefSeq represents the predicted microRNA stem-loop. [provided by RefSeq, Sep 2009]
Type: ncrna (Ensembl: miRNA)
RefSeq Status: PROVISIONAL
Previously known as: cfa-mir-192; microRNA 192
RGD Orthologs
Human
Mouse
Rat
Pig
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11852,281,129 - 52,281,193 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1852,281,129 - 52,281,193 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1850,888,461 - 50,888,525 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01853,322,283 - 53,322,347 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1853,322,283 - 53,322,347 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11852,417,276 - 52,417,340 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01852,002,572 - 52,002,636 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01852,786,986 - 52,787,050 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:16381832   PMID:18392026  


Genomics

Comparative Map Data
MIR192
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11852,281,129 - 52,281,193 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1852,281,129 - 52,281,193 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1850,888,461 - 50,888,525 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01853,322,283 - 53,322,347 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1853,322,283 - 53,322,347 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11852,417,276 - 52,417,340 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01852,002,572 - 52,002,636 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01852,786,986 - 52,787,050 (+)NCBIUU_Cfam_GSD_1.0
MIR192
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381164,891,137 - 64,891,246 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1164,891,137 - 64,891,246 (-)EnsemblGRCh38hg38GRCh38
GRCh371164,658,609 - 64,658,718 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361164,415,184 - 64,415,293 (-)NCBINCBI36Build 36hg18NCBI36
Celera1161,984,676 - 61,984,785 (-)NCBICelera
Cytogenetic Map11q13.1NCBI
HuRef1160,985,641 - 60,985,750 (-)NCBIHuRef
CHM1_11164,542,391 - 64,542,500 (-)NCBICHM1_1
T2T-CHM13v2.01164,884,376 - 64,884,485 (-)NCBIT2T-CHM13v2.0
Mir192
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39196,314,874 - 6,314,962 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl196,314,874 - 6,314,962 (+)EnsemblGRCm39 Ensembl
GRCm38196,264,844 - 6,264,932 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl196,264,844 - 6,264,932 (+)EnsemblGRCm38mm10GRCm38
MGSCv37196,264,844 - 6,264,932 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera196,137,173 - 6,137,261 (+)NCBICelera
Cytogenetic Map19ANCBI
cM Map194.39NCBI
Mir192
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81212,994,209 - 212,994,318 (+)NCBIGRCr8
mRatBN7.21203,564,946 - 203,565,055 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1203,564,946 - 203,565,055 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1211,913,950 - 211,914,059 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01219,010,277 - 219,010,386 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01211,701,334 - 211,701,443 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01221,634,971 - 221,635,080 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1221,634,971 - 221,635,080 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01228,620,072 - 228,620,181 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera1201,098,481 - 201,098,590 (+)NCBICelera
Cytogenetic Map1q43NCBI
MIR192
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl27,285,667 - 7,285,746 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.127,285,667 - 7,285,746 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.226,416,980 - 6,417,059 (+)NCBISscrofa10.2Sscrofa10.2susScr3


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSCAFT00000032648
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl1852,281,129 - 52,281,193 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845049986
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl1853,322,283 - 53,322,347 (+)Ensembl
RefSeq Acc Id: NR_049261
RefSeq Status: PROVISIONAL
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.11852,281,129 - 52,281,193 (+)NCBI
Dog10K_Boxer_Tasha1850,888,461 - 50,888,525 (+)NCBI
ROS_Cfam_1.01853,322,283 - 53,322,347 (+)NCBI
UMICH_Zoey_3.11852,417,276 - 52,417,340 (+)NCBI
UNSW_CanFamBas_1.01852,002,572 - 52,002,636 (+)NCBI
UU_Cfam_GSD_1.01852,786,986 - 52,787,050 (+)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000020541 Ensembl
  ENSCAFG00845028334 Ensembl, ENTREZGENE
Ensembl Transcript ENSCAFT00845049986 ENTREZGENE
miRBase MI0008031 ENTREZGENE
NCBI Gene MIR192 ENTREZGENE
RNAcentral URS0000155642 RNACentral
  URS00007E3C3C RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2019-04-02 MIR192  microRNA mir-192    microRNA 192  Symbol and/or name change 5135510 APPROVED