C37H2orf66 (chromosome 37 C2orf66 homolog)

Gene: C37H2orf66 (chromosome 37 C2orf66 homolog) Canis lupus familiaris

Analyze

Symbol:

C37H2orf66

Name:

chromosome 37 C2orf66 homolog

RGD ID:

12237216

Description:

ASSOCIATED WITH Neurodevelopmental Disorders (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

chromosome 37 open reading frame, human C2orf66; uncharacterized protein C2orf66 homolog

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	6,403,572 - 6,407,464 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	6,403,548 - 6,407,323 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	7,350,789 - 7,356,240 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	6,293,422 - 6,298,868 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	6,295,814 - 6,297,663 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	6,293,023 - 6,298,472 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	6,262,642 - 6,265,833 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	6,284,397 - 6,287,994 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Neurodevelopmental Disorders (ISO)

References

Genomics

Comparative Map Data

C37H2orf66
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	37	6,403,572 - 6,407,464 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	37	6,403,548 - 6,407,323 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	37	7,350,789 - 7,356,240 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	37	6,293,422 - 6,298,868 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	37	6,295,814 - 6,297,663 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	37	6,293,023 - 6,298,472 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	37	6,262,642 - 6,265,833 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	37	6,284,397 - 6,287,994 (-)	NCBI		UU_Cfam_GSD_1.0

C2orf66
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	2	196,804,417 - 196,832,139 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	2	196,804,417 - 196,809,355 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	2	197,669,141 - 197,674,079 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	2	197,378,254 - 197,383,245 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	2	191,425,877 - 191,430,868 (-)	NCBI		Celera
Cytogenetic Map	2	q33.1	NCBI
HuRef	2	189,521,761 - 189,527,630 (-)	NCBI		HuRef
CHM1_1	2	197,674,991 - 197,680,852 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	2	197,288,090 - 197,315,820 (-)	NCBI		T2T-CHM13v2.0

Gm34066
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	54,481,731 - 54,495,945 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	54,482,563 - 54,495,922 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	54,442,572 - 54,456,786 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	54,443,404 - 54,456,763 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	54,501,638 - 54,503,022 (-)	MERGE	GRCm37	MGSCv37	mm9	NCBIm37
Celera	1	54,967,465 - 54,981,716 (-)	NCBI		Celera
Cytogenetic Map	1	C1.2	NCBI

C9h2orf66
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	9	63,440,494 - 63,444,210 (-)	NCBI		GRCr8
mRatBN7.2	9	55,945,806 - 55,949,855 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	9	55,948,303 - 55,949,643 (-)	Ensembl		mRatBN7.2 Ensembl
Rnor_6.0	9	61,036,435 - 61,040,225 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_5.0	9	60,722,946 - 60,738,461 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	9	53,225,166 - 53,226,502 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	9	53,435,638 - 53,439,428 (-)	NCBI		Celera
Cytogenetic Map	9	q31	NCBI

CUNH2orf66
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955403	3,600,567 - 3,604,378 (+)	NCBI	ChiLan1.0	ChiLan1.0

C13H2orf66
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	13	99,424,004 - 99,439,884 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	2B	99,438,995 - 99,448,905 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	2B	84,048,089 - 84,055,991 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	2B	201,949,363 - 201,951,884 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	2B	201,949,363 - 201,951,310 (-)	Ensembl	panpan1.1		panPan2

CUNH2orf66
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405303	154,502,516 - 154,507,591 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936506	2,323,711 - 2,333,346 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

C15H2orf66
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	15	100,704,641 - 100,713,581 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	15	100,704,142 - 100,708,876 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	15	111,764,058 - 111,768,293 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CUNH2orf66
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	10	82,327,616 - 82,332,630 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	10	82,327,626 - 82,334,450 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666040	117,105,614 - 117,128,820 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Variants

Variants in C37H2orf66
51 total Variants

Expression

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_022415252	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038447335	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038447336	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038463755	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522084	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038585095	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038585096	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038649508	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000083	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000368	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000037	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

ENSCAFT00000072424 ⟹ ENSCAFP00000059879

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	37	6,403,548 - 6,407,323 (-)	Ensembl

RefSeq Acc Id:

ENSCAFT00845043489 ⟹ ENSCAFP00845034072

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	37	6,295,814 - 6,297,663 (-)	Ensembl

RefSeq Acc Id:

XM_022415252 ⟹ XP_022270960

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	37	6,403,572 - 6,407,464 (-)	NCBI
Dog10K_Boxer_Tasha	37	7,350,791 - 7,356,239 (-)	NCBI

Sequence:

show sequence

AATTCAGATGAAATAATATACTATTTCTTCCTCCTGTCTCTTTTAAAAAATACTTCCTCTTTCT
CTTTTCCACATCTGCCCTCCCTTCTTTTACCTTCTTCCTTCCCCTCCTTCTTTTTCTTTTCTCC
CTTTCTTCTCTCTCTGACCATTGACATTGCTCCGATCCTTCTTTCCACTCAGCTTCATTCCACC
ATGCCCAAAGCATCCCTGCTGCTGTGTGTTGCCTTGGTGCTACTTGGGCTTGTGCATGGAGCCA
CACTGAGAAACAAGGAGAAATGGAAGTCACTGAACAACCCCAGAAACAGAGATCTGTTTTTCAG
AACCCTTCAGGCGTATTTTAAGGGACGAGGTCTCGATCTCGGGAGGTTTCCAAACACTTTCTCC
ATGAACGAGAATCCTAGAGCTCTCACTTTCCAATCAGAACTTCTTGCCTCTGCATTTGCAGATT
ATGAAGAGGAGAAAAACTCCTTTCCCAAATACCTCAGAGGCTGAATGTTTCCTCTGAACACAGG
TGTCTGGCTATTTTGAAACCATATATGAAGCTTCTCATTAGAAAAATTCAATCGTGGTCATGGC
TAAACCAGTTTTCCCTCCACTTTTGTCAATGTATAATGGTTTTATTCTACATTTCTAGATTTAC
ATATAAATAAATTGACC

hide sequence

RefSeq Acc Id:

XM_038447335 ⟹ XP_038303263

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	37	6,293,424 - 6,298,867 (-)	NCBI

RefSeq Acc Id:

XM_038447336 ⟹ XP_038303264

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	37	6,293,422 - 6,298,868 (-)	NCBI

RefSeq Acc Id:

XM_038463755 ⟹ XP_038319683

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	37	7,350,789 - 7,356,240 (-)	NCBI

RefSeq Acc Id:

XM_038522083 ⟹ XP_038378011

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	37	6,293,025 - 6,298,471 (-)	NCBI

RefSeq Acc Id:

XM_038522084 ⟹ XP_038378012

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	37	6,293,023 - 6,298,472 (-)	NCBI

RefSeq Acc Id:

XM_038585095 ⟹ XP_038441023

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	37	6,284,400 - 6,287,994 (-)	NCBI

RefSeq Acc Id:

XM_038585096 ⟹ XP_038441024

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	37	6,284,397 - 6,287,994 (-)	NCBI

RefSeq Acc Id:

XM_038649508 ⟹ XP_038505436

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	37	6,262,642 - 6,265,833 (-)	NCBI

Protein Sequences


Protein RefSeqs	XP_022270960	(Get FASTA)	NCBI Sequence Viewer
	XP_038303263	(Get FASTA)	NCBI Sequence Viewer
	XP_038303264	(Get FASTA)	NCBI Sequence Viewer
	XP_038319683	(Get FASTA)	NCBI Sequence Viewer
	XP_038378011	(Get FASTA)	NCBI Sequence Viewer
	XP_038378012	(Get FASTA)	NCBI Sequence Viewer
	XP_038441023	(Get FASTA)	NCBI Sequence Viewer
	XP_038441024	(Get FASTA)	NCBI Sequence Viewer
	XP_038505436	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000059879.2
	ENSCAFP00030012163.1
	ENSCAFP00040031896.1
	ENSCAFP00845034072
	ENSCAFP00845034072.1

RefSeq Acc Id:	XP_022270960 ⟸ XM_022415252
- UniProtKB:	A0A8P0P8Z6 (UniProtKB/TrEMBL), A0A8C0MPN1 (UniProtKB/TrEMBL), A0A8C0Z2J9 (UniProtKB/TrEMBL)
- Sequence:	show sequence NSDEIIYYFFLLSLLKNTSSFSFPHLPSLLLPSSFPSFFFFSPFLLSLTIDIAPILLSTQLHST MPKASLLLCVALVLLGLVHGATLRNKEKWKSLNNPRNRDLFFRTLQAYFKGRGLDLGRFPNTFS MNENPRALTFQSELLASAFADYEEEKNSFPKYLRG hide sequence

RefSeq Acc Id:

ENSCAFP00000059879 ⟸ ENSCAFT00000072424

RefSeq Acc Id:

XP_038378012 ⟸ XM_038522084

RefSeq Acc Id:

XP_038378011 ⟸ XM_038522083

RefSeq Acc Id:

XP_038505436 ⟸ XM_038649508

RefSeq Acc Id:	XP_038303264 ⟸ XM_038447336
- UniProtKB:	A0A8I3PS64 (UniProtKB/TrEMBL), A0A8C0Z2J9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038303263 ⟸ XM_038447335
- UniProtKB:	A0A8I3PS64 (UniProtKB/TrEMBL), A0A8C0Z2J9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038319683 ⟸ XM_038463755
- UniProtKB:	A0A8P0P8Z6 (UniProtKB/TrEMBL), A0A8C0MPN1 (UniProtKB/TrEMBL), A0A8C0Z2J9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038441024 ⟸ XM_038585096
- UniProtKB:	A0A8C0MPN1 (UniProtKB/TrEMBL), A0A8C0Z2J9 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038441023 ⟸ XM_038585095
- UniProtKB:	A0A8C0MPN1 (UniProtKB/TrEMBL), A0A8C0Z2J9 (UniProtKB/TrEMBL)

RefSeq Acc Id:

ENSCAFP00845034072 ⟸ ENSCAFT00845043489

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000042468	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030007596	UniProtKB/TrEMBL
	ENSCAFG00040019813	UniProtKB/TrEMBL
	ENSCAFG00845024629	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000072424.2	UniProtKB/TrEMBL
	ENSCAFT00030013931.1	UniProtKB/TrEMBL
	ENSCAFT00040036619.1	UniProtKB/TrEMBL
	ENSCAFT00845043489	ENTREZGENE
	ENSCAFT00845043489.1	UniProtKB/TrEMBL
InterPro	DUF4720	UniProtKB/TrEMBL
NCBI Gene	C37H2orf66	ENTREZGENE
PANTHER	GENE, 34066-RELATED	UniProtKB/TrEMBL
	PTHR47620	UniProtKB/TrEMBL
Pfam	DUF4720	UniProtKB/TrEMBL
UniProt	A0A8C0MPN1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0Z2J9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PS64	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0P8Z6	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:111379	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2017-09-12	C37H2orf66	chromosome 37 C2orf66 homolog		chromosome 37 open reading frame, human C2orf66	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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