CUNH2orf66 (chromosome unknown C2orf66 homolog) - Rat Genome Database

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Gene: CUNH2orf66 (chromosome unknown C2orf66 homolog) Ictidomys tridecemlineatus
Analyze
Symbol: CUNH2orf66
Name: chromosome unknown C2orf66 homolog
RGD ID: 12671638
Description: ASSOCIATED WITH Neurodevelopmental Disorders (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: chromosome unknown open reading frame, human C2orf66; LOC101963132; uncharacterized protein C2orf66 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Dog
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: SpeTri2.0 - Squirrel SpeTri2.0 Assembly
Position:
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303154,502,516 - 154,507,591 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365062,323,711 - 2,333,346 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
CUNH2orf66
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405303154,502,516 - 154,507,591 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049365062,323,711 - 2,333,346 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
C2orf66
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382196,804,417 - 196,832,139 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2196,804,417 - 196,809,355 (-)EnsemblGRCh38hg38GRCh38
GRCh372197,669,141 - 197,674,079 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362197,378,254 - 197,383,245 (-)NCBINCBI36Build 36hg18NCBI36
Celera2191,425,877 - 191,430,868 (-)NCBICelera
Cytogenetic Map2q33.1NCBI
HuRef2189,521,761 - 189,527,630 (-)NCBIHuRef
CHM1_12197,674,991 - 197,680,852 (-)NCBICHM1_1
T2T-CHM13v2.02197,288,090 - 197,315,820 (-)NCBIT2T-CHM13v2.0
Gm34066
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39154,481,731 - 54,495,945 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl154,482,563 - 54,495,922 (-)EnsemblGRCm39 Ensembl
GRCm38154,442,572 - 54,456,786 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl154,443,404 - 54,456,763 (-)EnsemblGRCm38mm10GRCm38
MGSCv37154,501,638 - 54,503,022 (-)MERGEGRCm37MGSCv37mm9NCBIm37
Celera154,967,465 - 54,981,716 (-)NCBICelera
Cytogenetic Map1C1.2NCBI
C9h2orf66
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8963,440,494 - 63,444,210 (-)NCBIGRCr8
mRatBN7.2955,945,806 - 55,949,855 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl955,948,303 - 55,949,643 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.0961,036,435 - 61,040,225 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.0960,722,946 - 60,738,461 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4953,225,166 - 53,226,502 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera953,435,638 - 53,439,428 (-)NCBICelera
Cytogenetic Map9q31NCBI
CUNH2orf66
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049554033,600,567 - 3,604,378 (+)NCBIChiLan1.0ChiLan1.0
C13H2orf66
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21399,424,004 - 99,439,884 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12B99,438,995 - 99,448,905 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02B84,048,089 - 84,055,991 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12B201,949,363 - 201,951,884 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl2B201,949,363 - 201,951,310 (-)Ensemblpanpan1.1panPan2
C37H2orf66
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1376,403,572 - 6,407,464 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl376,403,548 - 6,407,323 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha377,350,789 - 7,356,240 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0376,293,422 - 6,298,868 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl376,295,814 - 6,297,663 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1376,293,023 - 6,298,472 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0376,262,642 - 6,265,833 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0376,284,397 - 6,287,994 (-)NCBIUU_Cfam_GSD_1.0
C15H2orf66
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl15100,704,641 - 100,713,581 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.115100,704,142 - 100,708,876 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.215111,764,058 - 111,768,293 (-)NCBISscrofa10.2Sscrofa10.2susScr3
CUNH2orf66
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11082,327,616 - 82,332,630 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1082,327,626 - 82,334,450 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_023666040117,105,614 - 117,128,820 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_040294639   ⟹   XP_040150573
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303154,502,516 - 154,507,591 (-)NCBI
RefSeq Acc Id: XM_040294640   ⟹   XP_040150574
Type: CODING
Position:
Squirrel AssemblyChrPosition (strand)Source
HiC_Itri_2NW_024405303154,502,516 - 154,507,569 (-)NCBI
Protein Sequences
Protein RefSeqs XP_040150573 (Get FASTA)   NCBI Sequence Viewer  
  XP_040150574 (Get FASTA)   NCBI Sequence Viewer  
GenBank Protein KAG3274911 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_040150573   ⟸   XM_040294639
- Peptide Label: isoform X1
RefSeq Acc Id: XP_040150574   ⟸   XM_040294640
- Peptide Label: isoform X2


Additional Information

Database Acc Id Source(s)
NCBI Gene LOC101963132 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-07-13 CUNH2orf66  chromosome unknown C2orf66 homolog  LOC101963132  chromosome unknown open reading frame, human C2orf66  Symbol and/or name change 5135510 APPROVED