Symbol:
SNX8
Name:
sorting nexin 8
RGD ID:
12209227
Description:
ENCODES a protein that exhibits identical protein binding (inferred); phosphatidylinositol binding (inferred); INVOLVED IN early endosome to Golgi transport (inferred); intracellular protein transport (inferred); protein transport (inferred); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (inferred); early endosome membrane (inferred); intracellular membrane-bounded organelle (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
sorting nexin-8
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Species
Gene symbol and name
Data Source
Assertion derived from
less info ...
Orthologs 1
Homo sapiens (human):
SNX8 (sorting nexin 8)
HGNC
EggNOG, Ensembl, HomoloGene, Inparanoid, NCBI, OMA, OrthoDB, OrthoMCL, Panther, Treefam
Mus musculus (house mouse):
Snx8 (sorting nexin 8)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):
Snx8 (sorting nexin 8)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):
Snx8 (sorting nexin 8)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Pan paniscus (bonobo/pygmy chimpanzee):
SNX8 (sorting nexin 8)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):
Snx8 (sorting nexin 8)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Sus scrofa (pig):
SNX8 (sorting nexin 8)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):
SNX8 (sorting nexin 8)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):
Snx8 (sorting nexin 8)
Transitive Ortholog Pipeline
Transitive Ortholog Pipeline
Latest Assembly:
CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 6 14,832,130 - 14,874,134 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 6 14,831,827 - 14,871,669 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 6 16,294,446 - 16,336,412 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 6 14,958,484 - 15,000,514 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 6 14,958,488 - 15,000,510 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 6 14,761,756 - 14,803,772 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 6 14,688,739 - 14,730,691 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 6 14,976,164 - 15,018,382 (+) NCBI UU_Cfam_GSD_1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
SNX8 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 6 14,832,130 - 14,874,134 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 6 14,831,827 - 14,871,669 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 6 16,294,446 - 16,336,412 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 6 14,958,484 - 15,000,514 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 6 14,958,488 - 15,000,510 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 6 14,761,756 - 14,803,772 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 6 14,688,739 - 14,730,691 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 6 14,976,164 - 15,018,382 (+) NCBI UU_Cfam_GSD_1.0
SNX8 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 7 2,251,770 - 2,354,497 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 7 2,251,770 - 2,354,318 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 7 2,291,405 - 2,354,076 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 7 2,261,164 - 2,320,625 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 7 2,067,881 - 2,127,340 NCBI Celera 7 2,264,329 - 2,323,538 (-) NCBI Celera Cytogenetic Map 7 p22.3 NCBI HuRef 7 2,210,687 - 2,261,757 (-) NCBI HuRef CHM1_1 7 2,291,011 - 2,353,690 (-) NCBI CHM1_1 T2T-CHM13v2.0 7 2,365,186 - 2,467,922 (-) NCBI T2T-CHM13v2.0 CRA_TCAGchr7v2 7 2,340,080 - 2,402,509 (-) NCBI
Snx8 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 5 140,326,048 - 140,375,063 (-) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 5 140,326,054 - 140,375,017 (-) Ensembl GRCm39 Ensembl GRCm38 5 140,340,293 - 140,389,308 (-) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 5 140,340,299 - 140,389,262 (-) Ensembl GRCm38 mm10 GRCm38 MGSCv37 5 140,816,257 - 140,865,201 (-) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 5 140,592,777 - 140,641,724 (-) NCBI MGSCv36 mm8 Celera 5 137,399,047 - 137,448,080 (-) NCBI Celera Cytogenetic Map 5 G2 NCBI cM Map 5 78.95 NCBI
Snx8 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 12 19,365,746 - 19,414,333 (+) NCBI GRCr8 mRatBN7.2 12 14,251,829 - 14,300,435 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 12 14,251,859 - 14,300,432 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 12 15,059,571 - 15,108,276 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 12 15,683,069 - 15,731,774 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 12 14,709,779 - 14,758,481 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 12 16,340,917 - 16,389,500 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 12 16,340,922 - 16,389,497 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 12 18,334,035 - 18,382,251 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 12 14,724,880 - 14,773,455 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 12 14,754,835 - 14,802,186 (+) NCBI Celera 12 16,011,254 - 16,059,221 (+) NCBI Celera Cytogenetic Map 12 q11 NCBI
Snx8 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955460 9,689,654 - 9,744,000 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955460 9,689,654 - 9,743,891 (-) NCBI ChiLan1.0 ChiLan1.0
SNX8 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 6 7,217,810 - 7,276,131 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 7 55,541,722 - 55,600,833 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 7 2,521,267 - 2,579,535 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 7 2,626,023 - 2,718,401 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 7 2,626,023 - 2,677,043 (-) Ensembl panpan1.1 panPan2
Snx8 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
SNX8 (Sus scrofa - pig)
SNX8 (Chlorocebus sabaeus - green monkey)
Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 28 19,278,821 - 19,345,751 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 28 19,278,880 - 19,348,437 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666090 2,398,302 - 2,454,397 (-) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Snx8 (Heterocephalus glaber - naked mole-rat)
.
Assembly: CanFam3.1
Chromosome
Start Pos
End Pos
Reference Nucleotide
Variant Nucleotide
Variant Type
Strain
Variant Page
6
14857834
14857835
T
C
snv
German Shepherd (GS3)
View more Information
6
14857842
14857843
A
G
snv
German Shepherd (GS3)
View more Information
6
14857858
14857859
T
G
snv
Bearded Collie (BD052) , German Shepherd (GS3), Kunming Dog (KM7), Labrador Retriever (LA2382), Leonberger (LB111), Old English Sheepdog (OS001), Standard Poodle (SRS932143), Tibetan Mastiff (TM10), Chinese indigenous dogs (DQ2), German Shepherd (GS2), Dachshund (DH098), Berger Blanc Suisse (BB011), Doberman Pinscher (DO242)
View more Information
6
14857906
14857907
T
C
snv
German Shepherd (GS2) , German Shepherd (GS3), Leonberger (LB111), Old English Sheepdog (OS001), Standard Poodle (SRS932143), Basenji (BJ002), Labrador Retriever (LA2382), Bearded Collie (BD052), Doberman Pinscher (DO242), Dachshund (DH098), Whippet (WH083)
View more Information
6
14857914
14857915
A
G
snv
Standard Poodle (SRS932143) , Old English Sheepdog (OS001), Leonberger (LB111), Labrador Retriever (LA2382), German Shepherd (GS3), German Shepherd (GS2), Doberman Pinscher (DO242), Whippet (WH083), Dachshund (DH098), Bearded Collie (BD052), Basenji (BJ002)
View more Information
6
14857929
14857930
G
C
snv
Leonberger (LB111) , Whippet (WH083), Standard Poodle (SRS932143), Old English Sheepdog (OS001), Labrador Retriever (LA2382), Dachshund (DH126), Doberman Pinscher (DO242), Dachshund (DH098), Basenji (BJ002), Bearded Collie (BD052), German Shepherd (GS2)
View more Information
6
14863255
14863256
C
G
snv
Doberman Pinscher (DO242) , Chinese indigenous dogs (YJ6), Alpine Dachsbracke (AD009), Australian Terrier (AR001), Border Collie (BC518), Chinese indigenous dogs (DQ1), Chinese indigenous dogs (DQ2), Chinese indigenous dogs (DQ3), Chinese indigenous dogs (DQ4), Chinese indigenous dogs (DQ5), Chinese indigenous dogs (DQ6), Chinese indigenous dogs (DQ7), Chinese indigenous dogs (DQ8), Chinese indigenous dogs (DQ9), German Shepherd (DS053), German Shepherd (GS10), German Spitz (GS104), German Shepherd (GS2), German Shepherd (GS4), German Shepherd (GS5), German Shepherd (GS6), German Shepherd (GS7), German Shepherd (GS9), Kunming Dog (KM1), Kunming Dog (KM10), Kunming Dog (KM2), Kunming Dog (KM3), Kunming Dog (KM4), Kunming Dog (KM5), Kunming Dog (KM6), Kunming Dog (KM8), Chinese indigenous dogs (LJ10), Chinese indigenous dogs (LJ3), Chinese indigenous dogs (LJ4), Chinese indigenous dogs (LJ6), Chinese indigenous dogs (LJ7), Chinese indigenous dogs (LJ8), Tibetan Mastiff (TM1), Tibetan Mastiff (TM10), Tibetan Mastiff (TM2), Tibetan Mastiff (TM3), Tibetan Mastiff (TM5), Tibetan Mastiff (TM6), Tibetan Mastiff (TM7), Wolf (WO001_895), Wolf (WO002_732), Chinese indigenous dogs (YJ1), Chinese indigenous dogs (YJ2), Chinese indigenous dogs (YJ3), Chinese indigenous dogs (YJ4), Chinese indigenous dogs (YJ9)
View more Information
6
14863279
14863280
A
G
snv
Border Collie (BC518) , Doberman Pinscher (DO242), Chinese indigenous dogs (DQ1), Chinese indigenous dogs (DQ2), Chinese indigenous dogs (DQ3), Chinese indigenous dogs (DQ4), Chinese indigenous dogs (DQ5), Chinese indigenous dogs (DQ6), Chinese indigenous dogs (DQ7), Chinese indigenous dogs (DQ8), Chinese indigenous dogs (DQ9), German Shepherd (DS053), German Shepherd (GS10), German Spitz (GS104), German Shepherd (GS2), German Shepherd (GS4), German Shepherd (GS5), German Shepherd (GS6), German Shepherd (GS7), German Shepherd (GS9), Kunming Dog (KM1), Kunming Dog (KM10), Kunming Dog (KM2), Kunming Dog (KM3), Kunming Dog (KM4), Kunming Dog (KM5), Kunming Dog (KM6), Kunming Dog (KM8), Chinese indigenous dogs (LJ10), Chinese indigenous dogs (LJ3), Chinese indigenous dogs (LJ6), Chinese indigenous dogs (LJ8), Tibetan Mastiff (TM1), Tibetan Mastiff (TM10), Tibetan Mastiff (TM2), Tibetan Mastiff (TM3), Tibetan Mastiff (TM5), Tibetan Mastiff (TM6), Tibetan Mastiff (TM7), Wolf (WO001_895), Chinese indigenous dogs (YJ1), Chinese indigenous dogs (YJ2), Chinese indigenous dogs (YJ3), Chinese indigenous dogs (YJ4), Chinese indigenous dogs (YJ6), Chinese indigenous dogs (YJ9), Chinese indigenous dogs (YJ7), Kunming Dog (KM7), Labrador Retriever (LA882), Chinese indigenous dogs (LJ4), Chinese indigenous dogs (LJ7), Lagotto Romagnolo (LR1030), Weimaraner (WE006)
View more Information
6
14863288
14863289
G
C
snv
Border Collie (BC518) , Chinese indigenous dogs (YJ9), Chinese indigenous dogs (DQ1), Chinese indigenous dogs (DQ2), Chinese indigenous dogs (DQ3), Chinese indigenous dogs (DQ4), Chinese indigenous dogs (DQ5), Chinese indigenous dogs (DQ6), Chinese indigenous dogs (DQ7), Chinese indigenous dogs (DQ9), German Shepherd (GS10), German Shepherd (GS2), German Shepherd (GS4), German Shepherd (GS5), German Shepherd (GS6), German Shepherd (GS7), German Shepherd (GS9), Kunming Dog (KM1), Kunming Dog (KM10), Kunming Dog (KM2), Kunming Dog (KM3), Kunming Dog (KM4), Kunming Dog (KM5), Kunming Dog (KM6), Kunming Dog (KM7), Labrador Retriever (LA882), Chinese indigenous dogs (LJ10), Chinese indigenous dogs (LJ3), Chinese indigenous dogs (LJ4), Chinese indigenous dogs (LJ6), Chinese indigenous dogs (LJ7), Chinese indigenous dogs (LJ8), Tibetan Mastiff (TM1), Tibetan Mastiff (TM10), Tibetan Mastiff (TM2), Tibetan Mastiff (TM3), Tibetan Mastiff (TM5), Tibetan Mastiff (TM6), Tibetan Mastiff (TM7), Weimaraner (WE006), Wolf (WO001_895), Chinese indigenous dogs (YJ1), Chinese indigenous dogs (YJ2), Chinese indigenous dogs (YJ3), Chinese indigenous dogs (YJ4), Chinese indigenous dogs (YJ6), Chinese indigenous dogs (YJ7), Doberman Pinscher (DO242)
View more Information
6
14863300
14863301
C
T
snv
Border Collie (BC518) , Chinese indigenous dogs (LJ4), Chinese indigenous dogs (DQ1), Chinese indigenous dogs (DQ2), Chinese indigenous dogs (DQ3), Chinese indigenous dogs (DQ4), Chinese indigenous dogs (DQ5), Chinese indigenous dogs (DQ6), Chinese indigenous dogs (DQ7), German Shepherd (GS10), German Shepherd (GS2), German Shepherd (GS4), German Shepherd (GS5), German Shepherd (GS6), German Shepherd (GS7), German Shepherd (GS9), Greyhound (GY432), Kunming Dog (KM10), Kunming Dog (KM2), Kunming Dog (KM3), Kunming Dog (KM4), Kunming Dog (KM5), Kunming Dog (KM6), Kunming Dog (KM7), Chinese indigenous dogs (LJ10), Chinese indigenous dogs (LJ3), Chinese indigenous dogs (LJ6), Chinese indigenous dogs (LJ7), Chinese indigenous dogs (LJ8), Tibetan Mastiff (TM1), Tibetan Mastiff (TM10), Tibetan Mastiff (TM2), Tibetan Mastiff (TM5), Tibetan Mastiff (TM6), Tibetan Mastiff (TM7), Wolf (WO001_895), Chinese indigenous dogs (YJ1), Chinese indigenous dogs (YJ2), Chinese indigenous dogs (YJ3), Chinese indigenous dogs (YJ4), Chinese indigenous dogs (YJ6), Chinese indigenous dogs (YJ7), Chinese indigenous dogs (YJ9), Doberman Pinscher (DO242)
View more Information
6
14863320
14863321
T
G
snv
Doberman Pinscher (DO242) , Chinese indigenous dogs (DQ2), Chinese indigenous dogs (DQ3), Chinese indigenous dogs (DQ4), Chinese indigenous dogs (DQ7), German Shepherd (DS053), German Shepherd (GS10), German Shepherd (GS2), German Shepherd (GS4), German Shepherd (GS6), German Shepherd (GS7), Siberian Husky (KKH2684), Kunming Dog (KM10), Kunming Dog (KM3), Kunming Dog (KM4), Kunming Dog (KM6), Chinese indigenous dogs (LJ10), Chinese indigenous dogs (LJ3), Chinese indigenous dogs (LJ7), Tibetan Mastiff (TM10), Tibetan Mastiff (TM2), Tibetan Mastiff (TM5), Tibetan Mastiff (TM6), Tibetan Mastiff (TM7), Wolf (WO001_895), Chinese indigenous dogs (YJ1), Chinese indigenous dogs (YJ2), Chinese indigenous dogs (YJ6), Chinese indigenous dogs (YJ9), Tibetan Mastiff (TM1), Chinese indigenous dogs (DQ1), Chinese indigenous dogs (DQ5), Chinese indigenous dogs (DQ6), German Shepherd (GS5), German Shepherd (GS9), Greyhound (GY432), Kunming Dog (KM5), Kunming Dog (KM7), Chinese indigenous dogs (LJ6)
View more Information
6
14863326
14863327
T
G
snv
Chinese indigenous dogs (YJ2) , Kunming Dog (KM4), Kunming Dog (KM3), Kunming Dog (KM10), Siberian Husky (KKH2684), Greyhound (GY432), German Shepherd (GS9), German Shepherd (GS7), German Shepherd (GS6), German Shepherd (GS5), German Shepherd (GS4), German Shepherd (GS2), German Shepherd (GS10), German Shepherd (DS053), Chinese indigenous dogs (DQ7), Chinese indigenous dogs (DQ6), Chinese indigenous dogs (DQ5), Chinese indigenous dogs (DQ4), Chinese indigenous dogs (DQ3), Chinese indigenous dogs (DQ2), Chinese indigenous dogs (DQ1), Kunming Dog (KM6), Kunming Dog (KM7), Chinese indigenous dogs (LJ10), Chinese indigenous dogs (LJ3), Chinese indigenous dogs (LJ6), Chinese indigenous dogs (LJ7), Tibetan Mastiff (TM1), Tibetan Mastiff (TM10), Tibetan Mastiff (TM2), Tibetan Mastiff (TM5), Tibetan Mastiff (TM6), Tibetan Mastiff (TM7), Wolf (WO001_895), Chinese indigenous dogs (YJ1), Kunming Dog (KM5), Chinese indigenous dogs (YJ3), Chinese indigenous dogs (YJ6), Chinese indigenous dogs (YJ9), Doberman Pinscher (DO242)
View more Information
6
14863340
14863341
T
C
snv
Chinese indigenous dogs (DQ1) , Chinese indigenous dogs (DQ2), Doberman Pinscher (DO242), Chinese indigenous dogs (DQ6), German Shepherd (GS5), Kunming Dog (KM10), Kunming Dog (KM4), Chinese indigenous dogs (LJ6), Chinese indigenous dogs (LJ7), Tibetan Mastiff (TM10), Tibetan Mastiff (TM6), Tibetan Mastiff (TM5), Tibetan Mastiff (TM2)
View more Information
6
14863930
14863931
C
G
snv
Chinese indigenous dogs (DQ1) , Chinese indigenous dogs (DQ4), Chinese indigenous dogs (DQ6), Chinese indigenous dogs (DQ8), German Spitz (GS104)
View more Information
6
14868993
14868994
C
T
snv
Alaskan Husky (SY018) , Siberian Husky (KKH2684), Alaskan Husky (SY001)
View more Information
6
14871575
14871576
C
T
snv
Chinese indigenous dogs (DQ7) , Chinese indigenous dogs (DQ1)
View more Information
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
6
5
5
23
22
16
6
6
6
6
33
22
12
14
10
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSCAFT00000026041 ⟹ ENSCAFP00000024177
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source CanFam3.1 Ensembl 6 14,831,827 - 14,871,669 (+) Ensembl
Ensembl Acc Id:
ENSCAFT00000064420 ⟹ ENSCAFP00000049207
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source CanFam3.1 Ensembl 6 14,831,827 - 14,871,669 (+) Ensembl
Ensembl Acc Id:
ENSCAFT00000081089 ⟹ ENSCAFP00000054979
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source CanFam3.1 Ensembl 6 14,835,683 - 14,871,669 (+) Ensembl
Ensembl Acc Id:
ENSCAFT00845012022 ⟹ ENSCAFP00845009381
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 Ensembl 6 14,958,488 - 15,000,510 (+) Ensembl
Ensembl Acc Id:
ENSCAFT00845012085 ⟹ ENSCAFP00845009436
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 Ensembl 6 14,958,492 - 15,000,484 (+) Ensembl
Ensembl Acc Id:
ENSCAFT00845012142 ⟹ ENSCAFP00845009486
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 Ensembl 6 14,962,043 - 15,000,510 (+) Ensembl
RefSeq Acc Id:
XM_022419808 ⟹ XP_022275516
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source CanFam3.1 6 14,832,130 - 14,874,134 (+) NCBI Dog10K_Boxer_Tasha 6 16,294,446 - 16,336,412 (+) NCBI
Sequence:
GCTAGCGCTCACATGACTGGCGGCGTGATGGACCGGCTGTCCGCGGAGGCAGGCGCGGCTCCAGTCGTGGCGGCAGCTGAGGCGGAGGCGGACGAGGAGGCGGACCCACCGGCGGCAGACAGGGAAGC CGAGGCCCAGCGGTCCCATCACTGGGCCAGGACTGGAGAGCGGGATTCACACGCGGGCTTGCCAACGCCCCAGATCAGCGAGCGGAGGGACCCATACCCCAATCGAATGCAGATGCCTCAGGGGAACC CGCTGCTGTTGTCATATACCCTGCAGGAGCTGCTGGCCAGGGACACCGTGCAGGTGGAGCTCATTCCTGAGAAGAAGGGCCTCTTCCTGAAGCATGTGGAATATGAGGTTTCCAGCCAGGGAGGCCGC TCTGCCCAAGGTGTGAAGGGCTCTGCCTGCTGGTGCTTAAGCCTGGGCCGCAGCCTGGGCCACTCGTTCTATCCTGGACCCTGCTCACCAGAGGTTCCACAGCAGAGGGACATGCCTGGCTTCATGGT TTTCTTTCTCTGCCTTTCCCAGGGCGCCCGGTTCTTGGGATCAGACTGGCTTCTTTCACCAAGCAGTGTTCTTTACAAGCAGTACAGCATATTTAATTTCGTTGCTCGTGCACATGTATCGTGTGAAC TCATACAGGAGAGCCAGCGCTTCCAATCCTCCGTGTATAGACGGTACAACGACTTTGTGGTTTTCCATGAGATGCTGCTGCACAGGTTCCCATACCGCATGGTGCCAGCCCTTCCGCCCAAGAGAGTC CTGGGAGCCGACCGGGAGTTCATTGAGTCCCGGCGAAGGGCGTTGAGGCGCTTCATTAACCTGGTGGCCCGGCACCCCCCATTTTCTGAGGACGTGGCTCTCAGGCTGTTCCTGTCCTTTAGTGGCCC TGACGTGCAGAACAAGTTAAAGGAATCCACTCAGTGTGTTGGAGATGAATTCATGAACTGTAAGCTGGCTCCTCGGGCCAAGGACTTCCTCCCGGCTGACATCCAGACTCAGTTTGCCGTCAGCCGGG AGCTCATCCGGAACATCTACAACAGCTTCTACAAGCTTCGAGATCGGGCCGAGCGGATTGCATCGAGGGCCATTGACAATGCTGCTGACCTTCTCGTATTTGGGAAGGAGCTGAGTGCTTTGGGGTCT GACACAACCCCACTCCCGTCCTGGGCCGCTCTGAACAGCAGCACGTGGGGGTCCCTTAAACAGGCACTGAAAGGCCTGTCTGTTGAATTTGCACTGCTTGCCGACAAGGCTGCCCAGCAGGGCAAACA GGAGGAGAATGATGTGGTGGAGAAACTAAACCTCTTCTTGGATCTGCTCCAGTCCTATAAAGACCTTTGTGAGCGGCATGAGAAGGGTGTGCTACATAAGCACCAGCGTGCCCTACACAAGTACAGCC TGATGAAGAGGCAGATGATGAGCGCTGCTGTGCAGAGCCGGGAGCCTGACTCTGTGGAGCAGCTGGAGTCCCGCATTGTGGAGCAGGAGAATGCCATCCAGACCATGGAGCTCCGGAGCTACTTCTCC CTGTACTGTCTGCACCAGGAGATGCAGCTGGTCCACGTCTACTTGCCTCTCACGTCCCACATTCTCGGTGCCTTTGTCAACTCTCAGATCCAAGGGCACAAGGAGATGAGCAAAGTGTGGAACGACCT GAAGCCCAAGCTAAACTGCCTCTTCGCTGGACCCAACAGCTCCCTAACCCTGCCGAGGTCCCCGCAGGACGGCGTGTCTCCTCACTAGTGCCAGAGGCCTGGGCGGGAGCTCCCAGCGGCCTCACTAA AACCTCTTTGCAAATGGCGTGTCCCTGTTTAATTCCCTTCAGACAGCAGCTGACACCCAGGCTGAGTGGGGCCAGGGTCTGGGTGCTCCCTTATGACCCCAGGCCTGAGTGTCCTCGGAAGCTGGAGG CCACAGGCACCTGCTCTGCTGCCTTTGACCTCACCCACCCACCACACTGTGCCTGTTGGTCTGGCAGAGAGAAGTTGAGGGTCCCTGGAATGGTTTTCTCCCTTCCAGAGGTTGGGGCAGCAGGATGG TTTCCACACAGCAGGTGCTGGGGGCCACGTGTAGGGGGTACCTGGGGACTTAGGTCGGTGTGGCGGGGGGGGGGTCTGGATCAACTGAGCCTGCAGAGGGCAAGACTGTCCCAGGGTCAGACAGGAGG TGGCTGTACCTGATAGAATTGCAGGCCAGCTGGCAGCTCTGGGTGGGCGCAGGTGCAGCAGGGTGAGTGTGCATGAGGTGGGGACTCAGGGGTTGCTAGGCACACAGATGGTGTTGATGTCCAGGGGA CGAGCCCCAGGGAGCACTGTGGGGGCCCTGGCCTGGTCTCTAGGGTGAAGGGTCTGGTGTCCCTCCCTGTGTGCCCACTCCTGCTCTGACCCCATCTATGCCCCGTGGTCTGCAGTGTAGGACATAAG GTGAAGTGGTACTTCTGTTTGTCCGAGGGCAGGAACAGTGCTGTCCTCTCAGCTGCTTGGCCGCTATCTTCAGAGACCATGCCTGGAGGCGGGCAGGGTGGAGGAGGGCAGGGGTGTGGGGGGTGGGG TCCAGCTGGGCTCTGTGGGACGGTCTGAGTTGCCGTGGCTGACCTGCTTTAAGATGACCTGTTAAGGTCCTTACATCCCTCCTCGTAGCCTGCCTCCTGCACCCGCAGGCCCCAAGGGCGTCTGTTCT AGATGCTCTGGGGTCCCTGTAGGCCTAGGGCCTGGGTGCTTCCTGCTCTGAATCCCTACTACTGTGTGAACATGGGCAGGGTGGGTGTTTCGTCCCAGGCCTGGAGTGGTGCTGGAGGATGCTCTGAC TGCACTACAGGATTCCTGAGATTCATGCCTTCTGGGGATGTGTGCAGACTCCTGGGGTTCTCCCTGGGTGCCATGTTGGGGGGACTTAGACCAGCGTATCCGCACATAGCACAGGGACCGAGGGTAAC TCCCACAGACGATGGGCTTCCTCCAGGAGCCAGTGCACACCGGAGTCTGGGGAGTGTCCTTTCGGGCCAGCCAATCGTGTCAGGCTGGGACTTGGGCCCACCCCACGTGTGGGTTCTGTCTATGCTGG CAGAGCAGCCGTGGGGGTGCAGGGAGAAGGCCTGCTGTGTGCCATGCAGCCTGAGGCCCATGACTGCAGCTTGTGCCTTTCCTGGGCTGACGAGAAGGTGCAGCGTGCTTGCAGAGCCCAGCAAGTCG GGGCCATTTTGGTCACTGACCTGTTTTTGGGCTGTCTGTGCTTGCCTCCTGACCCCCTGATGGAGAAGTGGGTTCTTGGGCACTGTGAACACTTGAGCTGTAAAGCGTGACCTCCAAGCCTCCCGTTA TGTCCCCTTGTCAGCCGCTGCTCGCCTGCCTGCAGTCTGCCTGTGGCCGTCAAGGTACAGGCAACCCCAGGACAGTGGAGAGCTGGGGAGACATTGGAGCAAGCCCAGCTTCACCCAGGCTAGGGGCA CGCACATTGGGCAGCAGCACCAAGGTGGGAGGGCTGGTGCTGGGAGGGTCTCCAAGGGCAGAGGAAACCCTGTCAGCAGAGACTTCGTGTGCTTTCTGAAGAGAACTTTTCTGACGGCCCCACGTTCC TGTGCAGAAAGCCAGGAAGTGCTCTCGCCTGGAGCTCTTGCCATGTTCCCGAGGCTTACCTGGAGGAGCACGTTCTGGTCCATCCCTCCCTCCTCTAGGCTCTGCAGGGAGGTCAGCAGACGGGGAGA GACTTGCTGGGGGTGGAGAACCATAAGTTCTTAGCTGGAGATGAGGCCACCTTTGGTTCCACACAAAGCCTCCATCTAGCCCCTGCACCTGGCTGCCACTGGATCCCTAGGCTCCGGGATCTTTTGCT CAGTGGTGTCCAGGGAGGCCCAGGCTGCCCGCAGCTGCAGGTCAGGGAGTGGAAGGGCCTCGCCTTGTCTGCCACGGCCGCCTGCCTGGTCCTCACACCATGGGGACAGAGCCCTGCTCCCCAACTGC AGGAAGGCTAGAGTGGAACTGGGCCCGGGTTCACCCACAGTCACCTGCACACACAGCAGAAGGCGCAGGCTGTGGTGTGGATCCAGGCGCGGGGGTCAGCATACTGAAGTCAGGCTGTCTGCCCTCGA GGCCCTTCCCCTCTTCCCGACGCAGTTTCACATGTGGAGCACTTTATAAGGTTGTGGGGGTCAGTTACTACTACACCAGGAAACTGGAATTGTTCACAAATGGCCTACGTTCCAAAGTATTTTTTATC AATAAATACGAACAACGATTAAACCTGTTTATGAAAATTGA
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RefSeq Acc Id:
XM_038478392 ⟹ XP_038334320
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UMICH_Zoey_3.1 6 14,761,756 - 14,803,772 (+) NCBI
RefSeq Acc Id:
XM_038539646 ⟹ XP_038395574
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UU_Cfam_GSD_1.0 6 14,976,164 - 15,018,382 (+) NCBI
RefSeq Acc Id:
XM_038603728 ⟹ XP_038459656
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UNSW_CanFamBas_1.0 6 14,688,739 - 14,730,691 (+) NCBI
RefSeq Acc Id:
XM_038668445 ⟹ XP_038524373
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 6 14,958,484 - 15,000,514 (+) NCBI
RefSeq Acc Id:
XP_022275516 ⟸ XM_022419808
- UniProtKB:
A0A8C0TDI3 (UniProtKB/TrEMBL), A0A8I3MYW1 (UniProtKB/TrEMBL)
- Sequence:
MTGGVMDRLSAEAGAAPVVAAAEAEADEEADPPAADREAEAQRSHHWARTGERDSHAGLPTPQISERRDPYPNRMQMPQGNPLLLSYTLQELLARDTVQVELIPEKKGLFLKHVEYEVSSQGGRSAQG VKGSACWCLSLGRSLGHSFYPGPCSPEVPQQRDMPGFMVFFLCLSQGARFLGSDWLLSPSSVLYKQYSIFNFVARAHVSCELIQESQRFQSSVYRRYNDFVVFHEMLLHRFPYRMVPALPPKRVLGAD REFIESRRRALRRFINLVARHPPFSEDVALRLFLSFSGPDVQNKLKESTQCVGDEFMNCKLAPRAKDFLPADIQTQFAVSRELIRNIYNSFYKLRDRAERIASRAIDNAADLLVFGKELSALGSDTTP LPSWAALNSSTWGSLKQALKGLSVEFALLADKAAQQGKQEENDVVEKLNLFLDLLQSYKDLCERHEKGVLHKHQRALHKYSLMKRQMMSAAVQSREPDSVEQLESRIVEQENAIQTMELRSYFSLYCL HQEMQLVHVYLPLTSHILGAFVNSQIQGHKEMSKVWNDLKPKLNCLFAGPNSSLTLPRSPQDGVSPH
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Ensembl Acc Id:
ENSCAFP00000049207 ⟸ ENSCAFT00000064420
Ensembl Acc Id:
ENSCAFP00000024177 ⟸ ENSCAFT00000026041
Ensembl Acc Id:
ENSCAFP00000054979 ⟸ ENSCAFT00000081089
RefSeq Acc Id:
XP_038334320 ⟸ XM_038478392
RefSeq Acc Id:
XP_038459656 ⟸ XM_038603728
RefSeq Acc Id:
XP_038524373 ⟸ XM_038668445
- UniProtKB:
A0A8C0TDI3 (UniProtKB/TrEMBL), A0A8I3MYW1 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_038395574 ⟸ XM_038539646
- UniProtKB:
A0A8C0TDI3 (UniProtKB/TrEMBL), A0A8I3MYW1 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSCAFP00845009436 ⟸ ENSCAFT00845012085
Ensembl Acc Id:
ENSCAFP00845009381 ⟸ ENSCAFT00845012022
Ensembl Acc Id:
ENSCAFP00845009486 ⟸ ENSCAFT00845012142
RGD ID: 13683586
Promoter ID: EPDNEW_C1652
Type: multiple initiation site
Name: SNX8_1
Description: sorting nexin 8
SO ACC ID: SO:0000170
Source: EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/ )
Experiment Methods: Single-end sequencing.
Position: Dog Assembly Chr Position (strand) Source CanFam3.1 6 14,832,140 - 14,832,200 EPDNEW