SNX8 (sorting nexin 8) - Rat Genome Database

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Gene: SNX8 (sorting nexin 8) Canis lupus familiaris
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Symbol: SNX8
Name: sorting nexin 8
RGD ID: 12209227
Description: ENCODES a protein that exhibits identical protein binding (inferred); phosphatidylinositol binding (inferred); INVOLVED IN early endosome to Golgi transport (inferred); intracellular protein transport (inferred); protein transport (inferred); ASSOCIATED WITH COVID-19 (ortholog); FOUND IN cytosol (inferred); early endosome membrane (inferred); intracellular membrane-bounded organelle (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: sorting nexin-8
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1614,832,130 - 14,874,134 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl614,831,827 - 14,871,669 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha616,294,446 - 16,336,412 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0614,958,484 - 15,000,514 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl614,958,488 - 15,000,510 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1614,761,756 - 14,803,772 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0614,688,739 - 14,730,691 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0614,976,164 - 15,018,382 (+)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model



  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SNX8DogCOVID-19  ISOSNX8 (Homo sapiens)9068941mRNA:increased expression:peripheral blood mononuclear cell (human)RGDPMID:32228226 and REF_RGD_ID:28912744


Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SNX8Dogearly endosome to Golgi transport involved_inIEAUniProtKB:Q9Y5X2 and ensembl:ENSP00000222990150520179 EnsemblGO_REF:0000107
SNX8Dogearly endosome to Golgi transport involved_inIBAPANTHER:PTN002471571 and UniProtKB:Q9Y5X2150520179 GO_CentralGO_REF:0000033
SNX8Dogintracellular protein transport involved_inIBAPANTHER:PTN002471571 and UniProtKB:Q9Y5X2150520179 GO_CentralGO_REF:0000033
SNX8Dogintracellular protein transport involved_inIEAUniProtKB:Q9Y5X2 and ensembl:ENSP00000222990150520179 EnsemblGO_REF:0000107
SNX8Dogprotein transport involved_inIEAUniProtKB-KW:KW-0653150520179 UniProtGO_REF:0000043
SNX8Dogretrograde transport, endosome to Golgi involved_inIEAInterPro:IPR028662150520179 InterProGO_REF:0000002

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SNX8Dogcytosol located_inIEAGO:0034498 and GO:0042147150520179 GOCGO_REF:0000108
SNX8Dogearly endosome membrane located_inIEAUniProtKB:Q9Y5X2 and ensembl:ENSP00000222990150520179 EnsemblGO_REF:0000107
SNX8Dogearly endosome membrane is_active_inIBAPANTHER:PTN002471571 and UniProtKB:Q9Y5X2150520179 GO_CentralGO_REF:0000033
SNX8Dogintracellular membrane-bounded organelle located_inIEAUniProtKB:Q9Y5X2 and ensembl:ENSP00000222990150520179 EnsemblGO_REF:0000107
SNX8Dogmembrane located_inIEAUniProtKB-KW:KW-0472150520179 UniProtGO_REF:0000043
SNX8Dogmembrane located_inIEAUniProtKB-SubCell:SL-0162150520179 UniProtGO_REF:0000044
SNX8Dogretromer complex located_inIEAUniProtKB:Q9Y5X2 and ensembl:ENSP00000222990150520179 EnsemblGO_REF:0000107

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
SNX8Dogidentical protein binding enablesIEAUniProtKB:Q9Y5X2 and ensembl:ENSP00000222990150520179 EnsemblGO_REF:0000107
SNX8Dogphosphatidylinositol binding enablesIEAInterPro:IPR001683 more ...150520179 InterProGO_REF:0000002
SNX8Dogphosphatidylinositol binding enablesIEAUniProtKB:Q9Y5X2 and ensembl:ENSP00000222990150520179 EnsemblGO_REF:0000107
SNX8Dogprotein binding enablesISOUniProtKB:P163339068941 PMID:17474147IntActPMID:17474147
SNX8Dogprotein binding enablesISOUniProtKB:Q15041 more ...9068941 PMID:32296183IntActPMID:32296183

PMID:22301074   PMID:30032202  



SNX8
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1614,832,130 - 14,874,134 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl614,831,827 - 14,871,669 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha616,294,446 - 16,336,412 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0614,958,484 - 15,000,514 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl614,958,488 - 15,000,510 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1614,761,756 - 14,803,772 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0614,688,739 - 14,730,691 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0614,976,164 - 15,018,382 (+)NCBIUU_Cfam_GSD_1.0
SNX8
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3872,251,770 - 2,354,497 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl72,251,770 - 2,354,318 (-)EnsemblGRCh38hg38GRCh38
GRCh3772,291,405 - 2,354,076 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 3672,261,164 - 2,320,625 (-)NCBINCBI36Build 36hg18NCBI36
Build 3472,067,881 - 2,127,340NCBI
Celera72,264,329 - 2,323,538 (-)NCBICelera
Cytogenetic Map7p22.3NCBI
HuRef72,210,687 - 2,261,757 (-)NCBIHuRef
CHM1_172,291,011 - 2,353,690 (-)NCBICHM1_1
T2T-CHM13v2.072,365,186 - 2,467,922 (-)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v272,340,080 - 2,402,509 (-)NCBI
Snx8
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395140,326,048 - 140,375,063 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5140,326,054 - 140,375,017 (-)EnsemblGRCm39 Ensembl
GRCm385140,340,293 - 140,389,308 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5140,340,299 - 140,389,262 (-)EnsemblGRCm38mm10GRCm38
MGSCv375140,816,257 - 140,865,201 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365140,592,777 - 140,641,724 (-)NCBIMGSCv36mm8
Celera5137,399,047 - 137,448,080 (-)NCBICelera
Cytogenetic Map5G2NCBI
cM Map578.95NCBI
Snx8
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81219,365,746 - 19,414,333 (+)NCBIGRCr8
mRatBN7.21214,251,829 - 14,300,435 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1214,251,859 - 14,300,432 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1215,059,571 - 15,108,276 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01215,683,069 - 15,731,774 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01214,709,779 - 14,758,481 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01216,340,917 - 16,389,500 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1216,340,922 - 16,389,497 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01218,334,035 - 18,382,251 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41214,724,880 - 14,773,455 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11214,754,835 - 14,802,186 (+)NCBI
Celera1216,011,254 - 16,059,221 (+)NCBICelera
Cytogenetic Map12q11NCBI
Snx8
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554609,689,654 - 9,744,000 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554609,689,654 - 9,743,891 (-)NCBIChiLan1.0ChiLan1.0
SNX8
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v267,217,810 - 7,276,131 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1755,541,722 - 55,600,833 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v072,521,267 - 2,579,535 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.172,626,023 - 2,718,401 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl72,626,023 - 2,677,043 (-)Ensemblpanpan1.1panPan2
Snx8
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344142,954,096 - 143,032,466 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493682318,248 - 62,936 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493682318,972 - 62,924 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
SNX8
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl31,576,126 - 1,618,997 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.131,576,129 - 1,618,991 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
SNX8
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12819,278,821 - 19,345,751 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2819,278,880 - 19,348,437 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660902,398,302 - 2,454,397 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Snx8
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474027,541,271 - 27,596,188 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474027,538,833 - 27,596,124 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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Variants in SNX8
406 total Variants


Assembly: CanFam3.1

Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Strain Variant Page
6 14857834 14857835 T C snv German Shepherd (GS3) View more Information
6 14857842 14857843 A G snv German Shepherd (GS3) View more Information
6 14857858 14857859 T G snv Bearded Collie (BD052), German Shepherd (GS3), Kunming Dog (KM7), Labrador Retriever (LA2382), Leonberger (LB111), Old English Sheepdog (OS001), Standard Poodle (SRS932143), Tibetan Mastiff (TM10), Chinese indigenous dogs (DQ2), German Shepherd (GS2), Dachshund (DH098), Berger Blanc Suisse (BB011), Doberman Pinscher (DO242) View more Information
6 14857906 14857907 T C snv German Shepherd (GS2), German Shepherd (GS3), Leonberger (LB111), Old English Sheepdog (OS001), Standard Poodle (SRS932143), Basenji (BJ002), Labrador Retriever (LA2382), Bearded Collie (BD052), Doberman Pinscher (DO242), Dachshund (DH098), Whippet (WH083) View more Information
6 14857914 14857915 A G snv Standard Poodle (SRS932143), Old English Sheepdog (OS001), Leonberger (LB111), Labrador Retriever (LA2382), German Shepherd (GS3), German Shepherd (GS2), Doberman Pinscher (DO242), Whippet (WH083), Dachshund (DH098), Bearded Collie (BD052), Basenji (BJ002) View more Information
6 14857929 14857930 G C snv Leonberger (LB111), Whippet (WH083), Standard Poodle (SRS932143), Old English Sheepdog (OS001), Labrador Retriever (LA2382), Dachshund (DH126), Doberman Pinscher (DO242), Dachshund (DH098), Basenji (BJ002), Bearded Collie (BD052), German Shepherd (GS2) View more Information
6 14863255 14863256 C G snv Doberman Pinscher (DO242), Chinese indigenous dogs (YJ6), Alpine Dachsbracke (AD009), Australian Terrier (AR001), Border Collie (BC518), Chinese indigenous dogs (DQ1), Chinese indigenous dogs (DQ2), Chinese indigenous dogs (DQ3), Chinese indigenous dogs (DQ4), Chinese indigenous dogs (DQ5), Chinese indigenous dogs (DQ6), Chinese indigenous dogs (DQ7), Chinese indigenous dogs (DQ8), Chinese indigenous dogs (DQ9), German Shepherd (DS053), German Shepherd (GS10), German Spitz (GS104), German Shepherd (GS2), German Shepherd (GS4), German Shepherd (GS5), German Shepherd (GS6), German Shepherd (GS7), German Shepherd (GS9), Kunming Dog (KM1), Kunming Dog (KM10), Kunming Dog (KM2), Kunming Dog (KM3), Kunming Dog (KM4), Kunming Dog (KM5), Kunming Dog (KM6), Kunming Dog (KM8), Chinese indigenous dogs (LJ10), Chinese indigenous dogs (LJ3), Chinese indigenous dogs (LJ4), Chinese indigenous dogs (LJ6), Chinese indigenous dogs (LJ7), Chinese indigenous dogs (LJ8), Tibetan Mastiff (TM1), Tibetan Mastiff (TM10), Tibetan Mastiff (TM2), Tibetan Mastiff (TM3), Tibetan Mastiff (TM5), Tibetan Mastiff (TM6), Tibetan Mastiff (TM7), Wolf (WO001_895), Wolf (WO002_732), Chinese indigenous dogs (YJ1), Chinese indigenous dogs (YJ2), Chinese indigenous dogs (YJ3), Chinese indigenous dogs (YJ4), Chinese indigenous dogs (YJ9) View more Information
6 14863279 14863280 A G snv Border Collie (BC518), Doberman Pinscher (DO242), Chinese indigenous dogs (DQ1), Chinese indigenous dogs (DQ2), Chinese indigenous dogs (DQ3), Chinese indigenous dogs (DQ4), Chinese indigenous dogs (DQ5), Chinese indigenous dogs (DQ6), Chinese indigenous dogs (DQ7), Chinese indigenous dogs (DQ8), Chinese indigenous dogs (DQ9), German Shepherd (DS053), German Shepherd (GS10), German Spitz (GS104), German Shepherd (GS2), German Shepherd (GS4), German Shepherd (GS5), German Shepherd (GS6), German Shepherd (GS7), German Shepherd (GS9), Kunming Dog (KM1), Kunming Dog (KM10), Kunming Dog (KM2), Kunming Dog (KM3), Kunming Dog (KM4), Kunming Dog (KM5), Kunming Dog (KM6), Kunming Dog (KM8), Chinese indigenous dogs (LJ10), Chinese indigenous dogs (LJ3), Chinese indigenous dogs (LJ6), Chinese indigenous dogs (LJ8), Tibetan Mastiff (TM1), Tibetan Mastiff (TM10), Tibetan Mastiff (TM2), Tibetan Mastiff (TM3), Tibetan Mastiff (TM5), Tibetan Mastiff (TM6), Tibetan Mastiff (TM7), Wolf (WO001_895), Chinese indigenous dogs (YJ1), Chinese indigenous dogs (YJ2), Chinese indigenous dogs (YJ3), Chinese indigenous dogs (YJ4), Chinese indigenous dogs (YJ6), Chinese indigenous dogs (YJ9), Chinese indigenous dogs (YJ7), Kunming Dog (KM7), Labrador Retriever (LA882), Chinese indigenous dogs (LJ4), Chinese indigenous dogs (LJ7), Lagotto Romagnolo (LR1030), Weimaraner (WE006) View more Information
6 14863288 14863289 G C snv Border Collie (BC518), Chinese indigenous dogs (YJ9), Chinese indigenous dogs (DQ1), Chinese indigenous dogs (DQ2), Chinese indigenous dogs (DQ3), Chinese indigenous dogs (DQ4), Chinese indigenous dogs (DQ5), Chinese indigenous dogs (DQ6), Chinese indigenous dogs (DQ7), Chinese indigenous dogs (DQ9), German Shepherd (GS10), German Shepherd (GS2), German Shepherd (GS4), German Shepherd (GS5), German Shepherd (GS6), German Shepherd (GS7), German Shepherd (GS9), Kunming Dog (KM1), Kunming Dog (KM10), Kunming Dog (KM2), Kunming Dog (KM3), Kunming Dog (KM4), Kunming Dog (KM5), Kunming Dog (KM6), Kunming Dog (KM7), Labrador Retriever (LA882), Chinese indigenous dogs (LJ10), Chinese indigenous dogs (LJ3), Chinese indigenous dogs (LJ4), Chinese indigenous dogs (LJ6), Chinese indigenous dogs (LJ7), Chinese indigenous dogs (LJ8), Tibetan Mastiff (TM1), Tibetan Mastiff (TM10), Tibetan Mastiff (TM2), Tibetan Mastiff (TM3), Tibetan Mastiff (TM5), Tibetan Mastiff (TM6), Tibetan Mastiff (TM7), Weimaraner (WE006), Wolf (WO001_895), Chinese indigenous dogs (YJ1), Chinese indigenous dogs (YJ2), Chinese indigenous dogs (YJ3), Chinese indigenous dogs (YJ4), Chinese indigenous dogs (YJ6), Chinese indigenous dogs (YJ7), Doberman Pinscher (DO242) View more Information
6 14863300 14863301 C T snv Border Collie (BC518), Chinese indigenous dogs (LJ4), Chinese indigenous dogs (DQ1), Chinese indigenous dogs (DQ2), Chinese indigenous dogs (DQ3), Chinese indigenous dogs (DQ4), Chinese indigenous dogs (DQ5), Chinese indigenous dogs (DQ6), Chinese indigenous dogs (DQ7), German Shepherd (GS10), German Shepherd (GS2), German Shepherd (GS4), German Shepherd (GS5), German Shepherd (GS6), German Shepherd (GS7), German Shepherd (GS9), Greyhound (GY432), Kunming Dog (KM10), Kunming Dog (KM2), Kunming Dog (KM3), Kunming Dog (KM4), Kunming Dog (KM5), Kunming Dog (KM6), Kunming Dog (KM7), Chinese indigenous dogs (LJ10), Chinese indigenous dogs (LJ3), Chinese indigenous dogs (LJ6), Chinese indigenous dogs (LJ7), Chinese indigenous dogs (LJ8), Tibetan Mastiff (TM1), Tibetan Mastiff (TM10), Tibetan Mastiff (TM2), Tibetan Mastiff (TM5), Tibetan Mastiff (TM6), Tibetan Mastiff (TM7), Wolf (WO001_895), Chinese indigenous dogs (YJ1), Chinese indigenous dogs (YJ2), Chinese indigenous dogs (YJ3), Chinese indigenous dogs (YJ4), Chinese indigenous dogs (YJ6), Chinese indigenous dogs (YJ7), Chinese indigenous dogs (YJ9), Doberman Pinscher (DO242) View more Information
6 14863320 14863321 T G snv Doberman Pinscher (DO242), Chinese indigenous dogs (DQ2), Chinese indigenous dogs (DQ3), Chinese indigenous dogs (DQ4), Chinese indigenous dogs (DQ7), German Shepherd (DS053), German Shepherd (GS10), German Shepherd (GS2), German Shepherd (GS4), German Shepherd (GS6), German Shepherd (GS7), Siberian Husky (KKH2684), Kunming Dog (KM10), Kunming Dog (KM3), Kunming Dog (KM4), Kunming Dog (KM6), Chinese indigenous dogs (LJ10), Chinese indigenous dogs (LJ3), Chinese indigenous dogs (LJ7), Tibetan Mastiff (TM10), Tibetan Mastiff (TM2), Tibetan Mastiff (TM5), Tibetan Mastiff (TM6), Tibetan Mastiff (TM7), Wolf (WO001_895), Chinese indigenous dogs (YJ1), Chinese indigenous dogs (YJ2), Chinese indigenous dogs (YJ6), Chinese indigenous dogs (YJ9), Tibetan Mastiff (TM1), Chinese indigenous dogs (DQ1), Chinese indigenous dogs (DQ5), Chinese indigenous dogs (DQ6), German Shepherd (GS5), German Shepherd (GS9), Greyhound (GY432), Kunming Dog (KM5), Kunming Dog (KM7), Chinese indigenous dogs (LJ6) View more Information
6 14863326 14863327 T G snv Chinese indigenous dogs (YJ2), Kunming Dog (KM4), Kunming Dog (KM3), Kunming Dog (KM10), Siberian Husky (KKH2684), Greyhound (GY432), German Shepherd (GS9), German Shepherd (GS7), German Shepherd (GS6), German Shepherd (GS5), German Shepherd (GS4), German Shepherd (GS2), German Shepherd (GS10), German Shepherd (DS053), Chinese indigenous dogs (DQ7), Chinese indigenous dogs (DQ6), Chinese indigenous dogs (DQ5), Chinese indigenous dogs (DQ4), Chinese indigenous dogs (DQ3), Chinese indigenous dogs (DQ2), Chinese indigenous dogs (DQ1), Kunming Dog (KM6), Kunming Dog (KM7), Chinese indigenous dogs (LJ10), Chinese indigenous dogs (LJ3), Chinese indigenous dogs (LJ6), Chinese indigenous dogs (LJ7), Tibetan Mastiff (TM1), Tibetan Mastiff (TM10), Tibetan Mastiff (TM2), Tibetan Mastiff (TM5), Tibetan Mastiff (TM6), Tibetan Mastiff (TM7), Wolf (WO001_895), Chinese indigenous dogs (YJ1), Kunming Dog (KM5), Chinese indigenous dogs (YJ3), Chinese indigenous dogs (YJ6), Chinese indigenous dogs (YJ9), Doberman Pinscher (DO242) View more Information
6 14863340 14863341 T C snv Chinese indigenous dogs (DQ1), Chinese indigenous dogs (DQ2), Doberman Pinscher (DO242), Chinese indigenous dogs (DQ6), German Shepherd (GS5), Kunming Dog (KM10), Kunming Dog (KM4), Chinese indigenous dogs (LJ6), Chinese indigenous dogs (LJ7), Tibetan Mastiff (TM10), Tibetan Mastiff (TM6), Tibetan Mastiff (TM5), Tibetan Mastiff (TM2) View more Information
6 14863930 14863931 C G snv Chinese indigenous dogs (DQ1), Chinese indigenous dogs (DQ4), Chinese indigenous dogs (DQ6), Chinese indigenous dogs (DQ8), German Spitz (GS104) View more Information
6 14868993 14868994 C T snv Alaskan Husky (SY018), Siberian Husky (KKH2684), Alaskan Husky (SY001) View more Information
6 14871575 14871576 C T snv Chinese indigenous dogs (DQ7), Chinese indigenous dogs (DQ1) View more Information




adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10



Ensembl Acc Id: ENSCAFT00000026041   ⟹   ENSCAFP00000024177
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl614,831,827 - 14,871,669 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000064420   ⟹   ENSCAFP00000049207
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl614,831,827 - 14,871,669 (+)Ensembl
Ensembl Acc Id: ENSCAFT00000081089   ⟹   ENSCAFP00000054979
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl614,835,683 - 14,871,669 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845012022   ⟹   ENSCAFP00845009381
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl614,958,488 - 15,000,510 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845012085   ⟹   ENSCAFP00845009436
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl614,958,492 - 15,000,484 (+)Ensembl
Ensembl Acc Id: ENSCAFT00845012142   ⟹   ENSCAFP00845009486
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl614,962,043 - 15,000,510 (+)Ensembl
RefSeq Acc Id: XM_022419808   ⟹   XP_022275516
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1614,832,130 - 14,874,134 (+)NCBI
Dog10K_Boxer_Tasha616,294,446 - 16,336,412 (+)NCBI
Sequence:
RefSeq Acc Id: XM_038478392   ⟹   XP_038334320
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1614,761,756 - 14,803,772 (+)NCBI
RefSeq Acc Id: XM_038539646   ⟹   XP_038395574
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0614,976,164 - 15,018,382 (+)NCBI
RefSeq Acc Id: XM_038603728   ⟹   XP_038459656
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0614,688,739 - 14,730,691 (+)NCBI
RefSeq Acc Id: XM_038668445   ⟹   XP_038524373
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0614,958,484 - 15,000,514 (+)NCBI
1 to 5 of 11 rows
1 to 5 of 11 rows
RefSeq Acc Id: XP_022275516   ⟸   XM_022419808
- UniProtKB: A0A8C0TDI3 (UniProtKB/TrEMBL),   A0A8I3MYW1 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSCAFP00000049207   ⟸   ENSCAFT00000064420
Ensembl Acc Id: ENSCAFP00000024177   ⟸   ENSCAFT00000026041
Ensembl Acc Id: ENSCAFP00000054979   ⟸   ENSCAFT00000081089
RefSeq Acc Id: XP_038334320   ⟸   XM_038478392
PX

RGD ID:13683586
Promoter ID:EPDNEW_C1652
Type:multiple initiation site
Name:SNX8_1
Description:sorting nexin 8
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1614,832,140 - 14,832,200EPDNEW


1 to 40 of 40 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSCAFG00000016426 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00040021055 UniProtKB/TrEMBL
  ENSCAFG00845006780 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000026041.5 UniProtKB/TrEMBL
  ENSCAFT00000064420.2 UniProtKB/TrEMBL
  ENSCAFT00000081089.2 UniProtKB/TrEMBL
  ENSCAFT00000097200.1 UniProtKB/TrEMBL
  ENSCAFT00000097560.1 UniProtKB/TrEMBL
  ENSCAFT00040039013.1 UniProtKB/TrEMBL
  ENSCAFT00040039067.1 UniProtKB/TrEMBL
  ENSCAFT00040039123.1 UniProtKB/TrEMBL
  ENSCAFT00845012022.1 UniProtKB/TrEMBL
  ENSCAFT00845012085 ENTREZGENE
  ENSCAFT00845012085.1 UniProtKB/TrEMBL
  ENSCAFT00845012142.1 UniProtKB/TrEMBL
Gene3D-CATH 1.20.1270.60 UniProtKB/TrEMBL
  3.30.1520.10 UniProtKB/TrEMBL
InterPro AH/BAR_dom_sf UniProtKB/TrEMBL
  PX_dom UniProtKB/TrEMBL
  PX_dom_sf UniProtKB/TrEMBL
  SNX8/Mvp1 UniProtKB/TrEMBL
  SNX8/Mvp1_PX UniProtKB/TrEMBL
  Snx8_BAR_dom UniProtKB/TrEMBL
NCBI Gene SNX8 ENTREZGENE
PANTHER PTHR46571 UniProtKB/TrEMBL
  SORTING NEXIN-8 UniProtKB/TrEMBL
Pfam PF00787 UniProtKB/TrEMBL
  Snx8_BAR_dom UniProtKB/TrEMBL
PROSITE PS50195 UniProtKB/TrEMBL
SMART SM00312 UniProtKB/TrEMBL
Superfamily-SCOP SSF64268 UniProtKB/TrEMBL
UniProt A0A8C0TBR6_CANLF UniProtKB/TrEMBL
  A0A8C0TDI3 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0Z3F0_CANLF UniProtKB/TrEMBL
  A0A8I3MYW1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3N2D5_CANLF UniProtKB/TrEMBL
  A0A8I3N3S3_CANLF UniProtKB/TrEMBL
  A0A8P0NZ64_CANLF UniProtKB/TrEMBL
  A0A8P0P4D9_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:46644 ENTREZGENE
1 to 40 of 40 rows