CCDC9B (coiled-coil domain containing 9B) - Rat Genome Database

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Gene: CCDC9B (coiled-coil domain containing 9B) Canis lupus familiaris
Analyze
Symbol: CCDC9B
Name: coiled-coil domain containing 9B
RGD ID: 12193412
Description: ASSOCIATED WITH Bloom syndrome (ortholog); colorectal cancer (ortholog); mosaic variegated aneuploidy syndrome 1 (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: C30H15orf52; chromosome 30 C15orf52 homolog; chromosome 30 open reading frame, human C15orf52; coiled-coil domain-containing protein 9B; uncharacterized protein C15orf52 homolog
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1307,514,029 - 7,523,076 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl307,516,710 - 7,523,357 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha307,567,936 - 7,576,983 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0307,639,833 - 7,648,881 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl307,639,833 - 7,648,874 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1307,564,367 - 7,573,415 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0307,670,318 - 7,679,353 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0307,799,099 - 7,808,147 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

References

Genomics

Comparative Map Data
CCDC9B
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1307,514,029 - 7,523,076 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl307,516,710 - 7,523,357 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha307,567,936 - 7,576,983 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0307,639,833 - 7,648,881 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl307,639,833 - 7,648,874 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1307,564,367 - 7,573,415 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0307,670,318 - 7,679,353 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0307,799,099 - 7,808,147 (-)NCBIUU_Cfam_GSD_1.0
CCDC9B
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381540,331,452 - 40,340,939 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1540,331,452 - 40,340,939 (-)EnsemblGRCh38hg38GRCh38
GRCh371540,623,653 - 40,633,140 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361538,410,945 - 38,420,460 (-)NCBINCBI36Build 36hg18NCBI36
Celera1517,389,636 - 17,399,151 (-)NCBICelera
Cytogenetic Map15q15.1NCBI
HuRef1517,467,024 - 17,476,543 (-)NCBIHuRef
CHM1_11540,743,516 - 40,753,031 (-)NCBICHM1_1
T2T-CHM13v2.01538,138,324 - 38,147,811 (-)NCBIT2T-CHM13v2.0
Ccdc9b
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392118,584,626 - 118,593,421 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2118,584,639 - 118,593,142 (-)EnsemblGRCm39 Ensembl
GRCm382118,754,145 - 118,762,947 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2118,754,158 - 118,762,661 (-)EnsemblGRCm38mm10GRCm38
MGSCv372118,579,881 - 118,588,397 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362118,445,599 - 118,453,107 (-)NCBIMGSCv36mm8
Celera2119,908,822 - 119,917,331 (-)NCBICelera
Cytogenetic Map2E5NCBI
cM Map259.45NCBI
Ccdc9b
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83126,190,039 - 126,198,931 (-)NCBIGRCr8
mRatBN7.23105,736,120 - 105,745,039 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3105,739,174 - 105,744,697 (-)EnsemblmRatBN7.2 Ensembl
Rnor_6.03110,548,238 - 110,557,096 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3110,551,233 - 110,556,813 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03117,088,852 - 117,097,427 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43105,260,699 - 105,266,052 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera3104,650,266 - 104,659,124 (-)NCBICelera
Cytogenetic Map3q35NCBI
Ccdc9b
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554167,257,232 - 7,267,171 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554167,258,446 - 7,268,342 (-)NCBIChiLan1.0ChiLan1.0
CCDC9B
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21629,565,417 - 29,574,915 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11533,716,865 - 33,726,375 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01519,265,502 - 19,275,023 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11537,520,475 - 37,529,968 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1537,520,475 - 37,529,968 (-)Ensemblpanpan1.1panPan2
Ccdc9b
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440864085,947,901 - 85,956,972 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364713,795,343 - 3,805,010 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364713,795,964 - 3,805,023 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
CCDC9B
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1130,975,347 - 130,983,969 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11130,974,635 - 130,983,973 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21146,059,846 - 146,069,050 (+)NCBISscrofa10.2Sscrofa10.2susScr3
CCDC9B
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12642,647,463 - 42,683,869 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2642,674,301 - 42,680,175 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604898,280,644 - 98,290,293 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ccdc9b
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248047,636,587 - 7,642,103 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248047,633,390 - 7,642,451 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in CCDC9B
74 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014109608 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014109609 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014109610 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014109613 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022412664 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022412665 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022412666 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038441962 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038441963 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038441964 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038441965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038441966 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038441967 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038461309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038516454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038516455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038516456 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038516457 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038516458 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038580044 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038580045 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038580046 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038580047 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038580048 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038580049 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038644319 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038644320 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038644321 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038644322 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038644323 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038644324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_001314965 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005304693 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005347766 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005381508 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_005415324 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000075 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000365 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000030 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000014426   ⟹   ENSCAFP00000013341
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl307,516,710 - 7,523,357 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000063282   ⟹   ENSCAFP00000065872
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl307,516,710 - 7,520,197 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845049149   ⟹   ENSCAFP00845038563
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl307,639,833 - 7,648,874 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845049223   ⟹   ENSCAFP00845038628
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl307,639,833 - 7,646,000 (-)Ensembl
RefSeq Acc Id: XM_014109608   ⟹   XP_013965083
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1307,514,029 - 7,523,076 (-)NCBI
Dog10K_Boxer_Tasha307,567,936 - 7,576,983 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014109610   ⟹   XP_013965085
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1307,514,029 - 7,523,075 (-)NCBI
Dog10K_Boxer_Tasha307,567,936 - 7,576,981 (-)NCBI
Sequence:
RefSeq Acc Id: XM_014109613   ⟹   XP_013965088
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1307,518,947 - 7,523,076 (-)NCBI
Dog10K_Boxer_Tasha307,572,863 - 7,576,982 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022412665   ⟹   XP_022268373
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1307,514,029 - 7,522,914 (-)NCBI
Dog10K_Boxer_Tasha307,567,936 - 7,576,819 (-)NCBI
Sequence:
RefSeq Acc Id: XM_022412666   ⟹   XP_022268374
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1307,514,029 - 7,521,762 (-)NCBI
Dog10K_Boxer_Tasha307,567,936 - 7,575,617 (-)NCBI
Sequence:
RefSeq Acc Id: XM_038441962   ⟹   XP_038297890
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0307,639,833 - 7,648,881 (-)NCBI
RefSeq Acc Id: XM_038441963   ⟹   XP_038297891
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0307,639,833 - 7,648,717 (-)NCBI
RefSeq Acc Id: XM_038441964   ⟹   XP_038297892
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0307,639,833 - 7,648,879 (-)NCBI
RefSeq Acc Id: XM_038441965   ⟹   XP_038297893
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0307,639,833 - 7,647,515 (-)NCBI
RefSeq Acc Id: XM_038441966   ⟹   XP_038297894
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0307,639,833 - 7,648,879 (-)NCBI
RefSeq Acc Id: XM_038441967   ⟹   XP_038297895
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0307,644,760 - 7,648,880 (-)NCBI
RefSeq Acc Id: XM_038461309   ⟹   XP_038317237
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha307,567,936 - 7,576,981 (-)NCBI
RefSeq Acc Id: XM_038516454   ⟹   XP_038372382
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1307,564,367 - 7,573,415 (-)NCBI
RefSeq Acc Id: XM_038516455   ⟹   XP_038372383
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1307,564,367 - 7,573,251 (-)NCBI
RefSeq Acc Id: XM_038516456   ⟹   XP_038372384
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1307,564,367 - 7,573,413 (-)NCBI
RefSeq Acc Id: XM_038516457   ⟹   XP_038372385
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1307,564,367 - 7,572,048 (-)NCBI
RefSeq Acc Id: XM_038516458   ⟹   XP_038372386
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1307,564,367 - 7,573,413 (-)NCBI
RefSeq Acc Id: XM_038580044   ⟹   XP_038435972
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0307,799,099 - 7,808,147 (-)NCBI
RefSeq Acc Id: XM_038580045   ⟹   XP_038435973
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0307,799,099 - 7,807,983 (-)NCBI
RefSeq Acc Id: XM_038580046   ⟹   XP_038435974
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0307,799,099 - 7,808,145 (-)NCBI
RefSeq Acc Id: XM_038580047   ⟹   XP_038435975
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0307,799,099 - 7,806,781 (-)NCBI
RefSeq Acc Id: XM_038580048   ⟹   XP_038435976
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0307,799,099 - 7,808,145 (-)NCBI
RefSeq Acc Id: XM_038580049   ⟹   XP_038435977
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0307,804,026 - 7,808,146 (-)NCBI
RefSeq Acc Id: XM_038644319   ⟹   XP_038500247
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0307,670,318 - 7,679,353 (-)NCBI
RefSeq Acc Id: XM_038644320   ⟹   XP_038500248
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0307,670,318 - 7,679,190 (-)NCBI
RefSeq Acc Id: XM_038644321   ⟹   XP_038500249
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0307,670,318 - 7,679,352 (-)NCBI
RefSeq Acc Id: XM_038644322   ⟹   XP_038500250
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0307,670,318 - 7,677,988 (-)NCBI
RefSeq Acc Id: XM_038644323   ⟹   XP_038500251
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0307,670,318 - 7,679,352 (-)NCBI
RefSeq Acc Id: XM_038644324   ⟹   XP_038500252
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0307,675,234 - 7,679,353 (-)NCBI
RefSeq Acc Id: XR_001314965
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1307,517,798 - 7,523,075 (-)NCBI
Dog10K_Boxer_Tasha307,571,704 - 7,576,982 (-)NCBI
Sequence:
RefSeq Acc Id: XR_005304693
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0307,643,601 - 7,648,880 (-)NCBI
RefSeq Acc Id: XR_005347766
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1307,568,134 - 7,573,414 (-)NCBI
RefSeq Acc Id: XR_005381508
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0307,802,867 - 7,808,146 (-)NCBI
RefSeq Acc Id: XR_005415324
Type: NON-CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0307,674,086 - 7,679,353 (-)NCBI
Protein Sequences
Protein RefSeqs XP_013965083 (Get FASTA)   NCBI Sequence Viewer  
  XP_013965085 (Get FASTA)   NCBI Sequence Viewer  
  XP_013965088 (Get FASTA)   NCBI Sequence Viewer  
  XP_022268373 (Get FASTA)   NCBI Sequence Viewer  
  XP_022268374 (Get FASTA)   NCBI Sequence Viewer  
  XP_038297890 (Get FASTA)   NCBI Sequence Viewer  
  XP_038297891 (Get FASTA)   NCBI Sequence Viewer  
  XP_038297892 (Get FASTA)   NCBI Sequence Viewer  
  XP_038297893 (Get FASTA)   NCBI Sequence Viewer  
  XP_038297894 (Get FASTA)   NCBI Sequence Viewer  
  XP_038297895 (Get FASTA)   NCBI Sequence Viewer  
  XP_038317237 (Get FASTA)   NCBI Sequence Viewer  
  XP_038372382 (Get FASTA)   NCBI Sequence Viewer  
  XP_038372383 (Get FASTA)   NCBI Sequence Viewer  
  XP_038372384 (Get FASTA)   NCBI Sequence Viewer  
  XP_038372385 (Get FASTA)   NCBI Sequence Viewer  
  XP_038372386 (Get FASTA)   NCBI Sequence Viewer  
  XP_038435972 (Get FASTA)   NCBI Sequence Viewer  
  XP_038435973 (Get FASTA)   NCBI Sequence Viewer  
  XP_038435974 (Get FASTA)   NCBI Sequence Viewer  
  XP_038435975 (Get FASTA)   NCBI Sequence Viewer  
  XP_038435976 (Get FASTA)   NCBI Sequence Viewer  
  XP_038435977 (Get FASTA)   NCBI Sequence Viewer  
  XP_038500247 (Get FASTA)   NCBI Sequence Viewer  
  XP_038500248 (Get FASTA)   NCBI Sequence Viewer  
  XP_038500249 (Get FASTA)   NCBI Sequence Viewer  
  XP_038500250 (Get FASTA)   NCBI Sequence Viewer  
  XP_038500251 (Get FASTA)   NCBI Sequence Viewer  
  XP_038500252 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000070605.1
  ENSCAFP00000070797.1
  ENSCAFP00845038563
  ENSCAFP00845038563.1
  ENSCAFP00845038628.1
RefSeq Acc Id: XP_013965083   ⟸   XM_014109608
- Peptide Label: isoform X1
- UniProtKB: A0A8I3PVF1 (UniProtKB/TrEMBL),   A0A8P0TN00 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013965085   ⟸   XM_014109610
- Peptide Label: isoform X3
- UniProtKB: A0A8I3PVF1 (UniProtKB/TrEMBL),   A0A8P0TN00 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_013965088   ⟸   XM_014109613
- Peptide Label: isoform X6
- Sequence:
RefSeq Acc Id: XP_022268373   ⟸   XM_022412665
- Peptide Label: isoform X2
- UniProtKB: A0A8I3PVF1 (UniProtKB/TrEMBL),   A0A8P0TN00 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_022268374   ⟸   XM_022412666
- Peptide Label: isoform X4
- Sequence:
Ensembl Acc Id: ENSCAFP00000013341   ⟸   ENSCAFT00000014426
Ensembl Acc Id: ENSCAFP00000065872   ⟸   ENSCAFT00000063282
RefSeq Acc Id: XP_038372382   ⟸   XM_038516454
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038372386   ⟸   XM_038516458
- Peptide Label: isoform X11
RefSeq Acc Id: XP_038372384   ⟸   XM_038516456
- Peptide Label: isoform X9
RefSeq Acc Id: XP_038372383   ⟸   XM_038516455
- Peptide Label: isoform X8
RefSeq Acc Id: XP_038372385   ⟸   XM_038516457
- Peptide Label: isoform X10
RefSeq Acc Id: XP_038500247   ⟸   XM_038644319
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038500251   ⟸   XM_038644323
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038500249   ⟸   XM_038644321
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038500248   ⟸   XM_038644320
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038500250   ⟸   XM_038644322
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038500252   ⟸   XM_038644324
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038297890   ⟸   XM_038441962
- Peptide Label: isoform X1
- UniProtKB: A0A8I3PVF1 (UniProtKB/TrEMBL),   A0A8P0TN00 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038297894   ⟸   XM_038441966
- Peptide Label: isoform X5
- UniProtKB: A0A8I3PVF1 (UniProtKB/TrEMBL),   A0A8P0TN00 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038297892   ⟸   XM_038441964
- Peptide Label: isoform X3
- UniProtKB: A0A8I3PVF1 (UniProtKB/TrEMBL),   A0A8P0TN00 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038297891   ⟸   XM_038441963
- Peptide Label: isoform X2
- UniProtKB: A0A8I3PVF1 (UniProtKB/TrEMBL),   A0A8P0TN00 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038297893   ⟸   XM_038441965
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038297895   ⟸   XM_038441967
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038317237   ⟸   XM_038461309
- Peptide Label: isoform X5
- UniProtKB: A0A8I3PVF1 (UniProtKB/TrEMBL),   A0A8P0TN00 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038435972   ⟸   XM_038580044
- Peptide Label: isoform X1
- UniProtKB: A0A8I3PVF1 (UniProtKB/TrEMBL),   A0A8P0TN00 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038435976   ⟸   XM_038580048
- Peptide Label: isoform X5
- UniProtKB: A0A8I3PVF1 (UniProtKB/TrEMBL),   A0A8P0TN00 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038435974   ⟸   XM_038580046
- Peptide Label: isoform X3
- UniProtKB: A0A8I3PVF1 (UniProtKB/TrEMBL),   A0A8P0TN00 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038435973   ⟸   XM_038580045
- Peptide Label: isoform X2
- UniProtKB: A0A8I3PVF1 (UniProtKB/TrEMBL),   A0A8P0TN00 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038435975   ⟸   XM_038580047
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038435977   ⟸   XM_038580049
- Peptide Label: isoform X6
Ensembl Acc Id: ENSCAFP00845038563   ⟸   ENSCAFT00845049149
Ensembl Acc Id: ENSCAFP00845038628   ⟸   ENSCAFT00845049223

Promoters
RGD ID:13688473
Promoter ID:EPDNEW_C6541
Type:multiple initiation site
Name:CCDC9B_1
Description:coiled-coil domain containing 9B
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1307,523,052 - 7,523,112EPDNEW

Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000009075 Ensembl
  ENSCAFG00000051097 UniProtKB/TrEMBL
  ENSCAFG00845027800 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000097798.1 UniProtKB/TrEMBL
  ENSCAFT00000109094.1 UniProtKB/TrEMBL
  ENSCAFT00845049149 ENTREZGENE
  ENSCAFT00845049149.1 UniProtKB/TrEMBL
  ENSCAFT00845049223.1 UniProtKB/TrEMBL
InterPro DUF4594 UniProtKB/TrEMBL
NCBI Gene C30H15orf52 ENTREZGENE
PANTHER COILED-COIL DOMAIN-CONTAINING PROTEIN 9B UniProtKB/TrEMBL
  PTHR15635 UniProtKB/TrEMBL
Pfam DUF4594 UniProtKB/TrEMBL
UniProt A0A8I3PVF1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3Q306_CANLF UniProtKB/TrEMBL
  A0A8P0PKR8_CANLF UniProtKB/TrEMBL
  A0A8P0TN00 ENTREZGENE, UniProtKB/TrEMBL
VGNC ID VGNC:49592 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-10-17 CCDC9B  coiled-coil domain containing 9B  C30H15orf52  chromosome 30 C15orf52 homolog  Symbol and/or name change 5135510 APPROVED
2017-09-12 C30H15orf52  chromosome 30 C15orf52 homolog    chromosome 30 open reading frame, human C15orf52  Symbol and/or name change 5135510 APPROVED