Symbol:
PEX10
Name:
peroxisomal biogenesis factor 10
RGD ID:
12162812
Description:
ENCODES a protein that exhibits metal ion binding (inferred); transferase activity (inferred); ubiquitin protein ligase activity (inferred); INVOLVED IN cellular response to reactive oxygen species (inferred); peroxisome organization (inferred); protein import into peroxisome matrix (inferred); ASSOCIATED WITH chromosome 1p36 deletion syndrome (ortholog); dilated cardiomyopathy 1LL (ortholog); Ehlers-Danlos syndrome spondylodysplastic type 2 (ortholog); FOUND IN peroxisomal membrane (ortholog)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
peroxisome biogenesis factor 10
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 5 57,289,530 - 57,291,864 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 5 57,289,326 - 57,291,802 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 5 57,365,090 - 57,370,826 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 5 57,490,823 - 57,496,559 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 5 57,490,823 - 57,496,544 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 5 57,482,087 - 57,487,825 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 5 57,374,420 - 57,380,164 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 5 57,764,072 - 57,769,814 (-) NCBI UU_Cfam_GSD_1.0
JBrowse:
View Region in Genome Browser (JBrowse)
Model
PEX10 Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 5 57,289,530 - 57,291,864 (-) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 5 57,289,326 - 57,291,802 (-) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 5 57,365,090 - 57,370,826 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 5 57,490,823 - 57,496,559 (-) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 5 57,490,823 - 57,496,544 (-) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 5 57,482,087 - 57,487,825 (-) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 5 57,374,420 - 57,380,164 (-) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 5 57,764,072 - 57,769,814 (-) NCBI UU_Cfam_GSD_1.0
PEX10 Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 1 2,403,974 - 2,413,827 (-) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 1 2,403,964 - 2,413,797 (-) Ensembl GRCh38 hg38 GRCh38 GRCh37 1 2,335,413 - 2,345,266 (-) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 1 2,326,101 - 2,333,870 (-) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 1 2,368,404 - 2,376,172 NCBI Celera 1 242,696 - 250,465 (+) NCBI Celera Cytogenetic Map 1 p36.32 NCBI HuRef 1 1,614,950 - 1,622,719 (-) NCBI HuRef CHM1_1 1 2,323,310 - 2,331,079 (-) NCBI CHM1_1 T2T-CHM13v2.0 1 1,843,564 - 1,853,417 (-) NCBI T2T-CHM13v2.0
Pex10 Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 4 155,151,487 - 155,156,863 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 4 155,151,473 - 155,156,890 (+) Ensembl GRCm39 Ensembl GRCm38 4 155,067,030 - 155,072,406 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 4 155,067,016 - 155,072,433 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 4 154,441,139 - 154,446,515 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 4 153,910,830 - 153,916,233 (+) NCBI MGSCv36 mm8 Celera 4 157,339,382 - 157,344,758 (+) NCBI Celera Cytogenetic Map 4 E2 NCBI cM Map 4 86.17 NCBI
Pex10 Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 5 170,910,136 - 170,915,302 (+) NCBI GRCr8 mRatBN7.2 5 165,627,799 - 165,632,965 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 5 165,627,799 - 165,632,965 (+) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 5 168,333,758 - 168,338,924 (+) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 5 170,155,172 - 170,160,338 (+) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 5 170,117,701 - 170,122,867 (+) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 5 172,469,978 - 172,475,144 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 5 172,469,978 - 172,475,144 (+) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 5 175,925,857 - 175,931,023 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 5 171,868,928 - 171,874,094 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 Celera 5 163,833,565 - 163,838,731 (+) NCBI Celera Cytogenetic Map 5 q36 NCBI
Pex10 Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955486 8,785,174 - 8,791,247 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955486 8,785,199 - 8,801,914 (+) NCBI ChiLan1.0 ChiLan1.0
PEX10 Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 1 225,842,522 - 225,850,326 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 1 224,503,525 - 224,511,318 (+) NCBI NHGRI_mPanPan1 PanPan1.1 Ensembl 1 2,270,698 - 2,278,401 (-) Ensembl panpan1.1 panPan2
Pex10 Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405058 28,313,242 - 28,321,199 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936737 1,144,700 - 1,152,718 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936737 1,144,753 - 1,152,720 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
PEX10
PEX10 Green Monkey Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChlSab1.1 20 129,145,587 - 129,155,687 (+) NCBI ChlSab1.1 ChlSab1.1 chlSab2 ChlSab1.1 Ensembl 20 129,145,638 - 129,153,968 (+) Ensembl ChlSab1.1 ChlSab1.1 Ensembl chlSab2 Vero_WHO_p1.0 NW_023666054 33,493,108 - 33,501,971 (+) NCBI Vero_WHO_p1.0 Vero_WHO_p1.0
Pex10
.
Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
alimentary part of gastrointestinal system
6
5
5
23
22
16
6
6
6
6
33
22
12
14
10
Too many to show, limit is 500. Download them if you would like to view them all.
Ensembl Acc Id:
ENSCAFT00000030837 ⟹ ENSCAFP00000028671
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source CanFam3.1 Ensembl 5 57,290,067 - 57,291,802 (-) Ensembl
Ensembl Acc Id:
ENSCAFT00000074612 ⟹ ENSCAFP00000045906
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source CanFam3.1 Ensembl 5 57,289,326 - 57,291,802 (-) Ensembl
Ensembl Acc Id:
ENSCAFT00845030793 ⟹ ENSCAFP00845024143
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 Ensembl 5 57,490,823 - 57,496,544 (-) Ensembl
RefSeq Acc Id:
XM_038476559 ⟹ XP_038332487
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UMICH_Zoey_3.1 5 57,482,087 - 57,487,825 (-) NCBI
RefSeq Acc Id:
XM_038522518 ⟹ XP_038378446
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source Dog10K_Boxer_Tasha 5 57,365,090 - 57,370,826 (-) NCBI
RefSeq Acc Id:
XM_038537692 ⟹ XP_038393620
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UU_Cfam_GSD_1.0 5 57,764,072 - 57,769,814 (-) NCBI
RefSeq Acc Id:
XM_038601856 ⟹ XP_038457784
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source UNSW_CanFamBas_1.0 5 57,374,420 - 57,380,164 (-) NCBI
RefSeq Acc Id:
XM_038666441 ⟹ XP_038522369
Type:
CODING
Position:
Dog Assembly Chr Position (strand) Source ROS_Cfam_1.0 5 57,490,823 - 57,496,559 (-) NCBI
Ensembl Acc Id:
ENSCAFP00000028671 ⟸ ENSCAFT00000030837
Ensembl Acc Id:
ENSCAFP00000045906 ⟸ ENSCAFT00000074612
RefSeq Acc Id:
XP_038332487 ⟸ XM_038476559
RefSeq Acc Id:
XP_038457784 ⟸ XM_038601856
RefSeq Acc Id:
XP_038393620 ⟸ XM_038537692
- UniProtKB:
A0A8C0Q9N5 (UniProtKB/TrEMBL), A0A8C0QGB0 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSCAFP00845024143 ⟸ ENSCAFT00845030793
