MGRN1 (mahogunin ring finger 1) - Rat Genome Database

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Gene: MGRN1 (mahogunin ring finger 1) Canis lupus familiaris
Analyze
Symbol: MGRN1
Name: mahogunin ring finger 1
RGD ID: 12144208
Description: ENCODES a protein that exhibits metal ion binding (inferred); transferase activity (inferred); ubiquitin protein ligase activity (inferred); INVOLVED IN heart development (ortholog); protein polyubiquitination (ortholog); protein ubiquitination (ortholog); PARTICIPATES IN melanocortin system pathway; ASSOCIATED WITH epilepsy (ortholog); hyperglycemia (ortholog); hyperinsulinism (ortholog); FOUND IN plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: E3 ubiquitin-protein ligase MGRN1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Bonobo
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: CanFam3.1 - Dog CanFam3.1 Assembly
Position:
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1636,716,071 - 36,775,893 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl636,716,343 - 36,769,417 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha638,050,260 - 38,103,958 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0636,919,892 - 36,979,309 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl636,918,610 - 36,979,312 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1636,713,739 - 36,773,816 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0636,606,581 - 36,666,904 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0637,009,268 - 37,068,750 (-)NCBIUU_Cfam_GSD_1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
MGRN1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1636,716,071 - 36,775,893 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl636,716,343 - 36,769,417 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha638,050,260 - 38,103,958 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0636,919,892 - 36,979,309 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl636,918,610 - 36,979,312 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1636,713,739 - 36,773,816 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0636,606,581 - 36,666,904 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0637,009,268 - 37,068,750 (-)NCBIUU_Cfam_GSD_1.0
MGRN1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38164,624,826 - 4,690,972 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl164,616,493 - 4,690,974 (+)EnsemblGRCh38hg38GRCh38
GRCh37164,674,827 - 4,740,973 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36164,614,854 - 4,680,974 (+)NCBINCBI36Build 36hg18NCBI36
Build 34164,614,853 - 4,680,972NCBI
Celera164,883,683 - 4,949,753 (+)NCBICelera
Cytogenetic Map16p13.3NCBI
HuRef164,641,815 - 4,707,494 (+)NCBIHuRef
CHM1_1164,674,882 - 4,741,756 (+)NCBICHM1_1
T2T-CHM13v2.0164,654,281 - 4,720,424 (+)NCBIT2T-CHM13v2.0
Mgrn1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39164,703,964 - 4,756,160 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl164,704,113 - 4,756,160 (+)EnsemblGRCm39 Ensembl
GRCm38164,886,100 - 4,938,296 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl164,886,249 - 4,938,296 (+)EnsemblGRCm38mm10GRCm38
MGSCv37164,886,252 - 4,938,296 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36164,801,480 - 4,853,524 (+)NCBIMGSCv36mm8
Celera165,517,662 - 5,569,636 (+)NCBICelera
Cytogenetic Map16A1NCBI
cM Map162.48NCBI
Mgrn1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81011,142,626 - 11,194,773 (-)NCBIGRCr8
mRatBN7.21010,638,881 - 10,688,332 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1010,638,880 - 10,688,315 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1015,348,233 - 15,396,588 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01014,837,050 - 14,885,406 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01010,506,186 - 10,554,831 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01010,832,573 - 10,881,999 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1010,833,519 - 10,881,977 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0109,599,503 - 9,648,909 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41010,756,804 - 10,805,883 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.11010,756,804 - 10,805,883 (-)NCBI
Celera109,604,036 - 9,652,494 (-)NCBICelera
Cytogenetic Map10q12NCBI
Mgrn1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495544212,781,539 - 12,824,222 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495544212,780,795 - 12,823,716 (-)NCBIChiLan1.0ChiLan1.0
MGRN1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2185,154,386 - 5,219,725 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1168,944,813 - 9,009,883 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0163,550,352 - 3,615,693 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1164,740,763 - 4,782,638 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl164,740,763 - 4,782,638 (+)Ensemblpanpan1.1panPan2
Mgrn1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024409344106,801,950 - 106,847,702 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365304,652,464 - 4,693,999 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365304,647,550 - 4,693,143 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
MGRN1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl337,694,808 - 37,748,067 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1337,694,798 - 37,748,106 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2338,753,414 - 38,806,811 (-)NCBISscrofa10.2Sscrofa10.2susScr3
MGRN1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.154,310,924 - 4,372,896 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl54,310,970 - 4,375,423 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366606826,292,411 - 26,363,923 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Mgrn1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248242,420,203 - 2,470,627 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248242,419,973 - 2,473,580 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2

Variants

.
Variants in MGRN1
541 total Variants

Expression

RNA-SEQ Expression

adipose tissue
alimentary part of gastrointestinal system
circulatory system
ectoderm
endocrine system
endoderm
exocrine system
hemolymphoid system
hepatobiliary system
integumental system
mesenchyme
mesoderm
nervous system
reproductive system
respiratory system
6 5 5 23 22 16 6 6 6 6 33 22 12 14 10

Sequence

Nucleotide Sequences
RefSeq Transcripts XM_014114650 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014114652 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014114653 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_014114654 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022420116 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022420117 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022420118 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_022420119 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479274 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479275 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479276 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479277 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479278 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479279 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479280 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038479281 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038535253 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540519 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540523 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540524 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540525 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038540526 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604618 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604619 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604620 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604621 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604622 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604623 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604624 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038604625 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669306 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669307 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669308 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669309 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669310 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669311 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669312 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_038669313 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AAEX04000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAHUQ010000072 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAQRD010000090 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  JAAUVH010000065 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  REHQ01000006 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSCAFT00000008138   ⟹   ENSCAFP00000007537
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl636,716,354 - 36,750,094 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000030479   ⟹   ENSCAFP00000028319
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl636,719,574 - 36,750,094 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000068160   ⟹   ENSCAFP00000048946
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl636,716,456 - 36,750,094 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000071932   ⟹   ENSCAFP00000060789
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl636,716,456 - 36,750,094 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000073728   ⟹   ENSCAFP00000047855
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl636,720,414 - 36,750,094 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000075006   ⟹   ENSCAFP00000060816
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl636,716,343 - 36,750,094 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000086962   ⟹   ENSCAFP00000057580
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl636,716,456 - 36,747,246 (-)Ensembl
Ensembl Acc Id: ENSCAFT00000093788   ⟹   ENSCAFP00000066535
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
CanFam3.1 Ensembl636,716,343 - 36,769,417 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845034515   ⟹   ENSCAFP00845027036
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl636,918,610 - 36,979,312 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845034679   ⟹   ENSCAFP00845027161
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl636,918,610 - 36,979,194 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845034886   ⟹   ENSCAFP00845027323
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl636,918,610 - 36,950,960 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845035054   ⟹   ENSCAFP00845027445
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl636,918,610 - 36,950,960 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845035207   ⟹   ENSCAFP00845027559
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl636,918,610 - 36,950,960 (-)Ensembl
Ensembl Acc Id: ENSCAFT00845035324   ⟹   ENSCAFP00845027649
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0 Ensembl636,922,455 - 36,979,312 (-)Ensembl
RefSeq Acc Id: XM_038479274   ⟹   XP_038335202
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1636,713,739 - 36,773,816 (-)NCBI
RefSeq Acc Id: XM_038479275   ⟹   XP_038335203
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1636,713,739 - 36,773,816 (-)NCBI
RefSeq Acc Id: XM_038479276   ⟹   XP_038335204
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1636,714,872 - 36,773,816 (-)NCBI
RefSeq Acc Id: XM_038479277   ⟹   XP_038335205
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1636,713,739 - 36,773,816 (-)NCBI
RefSeq Acc Id: XM_038479278   ⟹   XP_038335206
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1636,715,792 - 36,773,816 (-)NCBI
RefSeq Acc Id: XM_038479279   ⟹   XP_038335207
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1636,713,739 - 36,773,816 (-)NCBI
RefSeq Acc Id: XM_038479280   ⟹   XP_038335208
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1636,713,739 - 36,773,816 (-)NCBI
RefSeq Acc Id: XM_038479281   ⟹   XP_038335209
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UMICH_Zoey_3.1636,713,739 - 36,773,816 (-)NCBI
RefSeq Acc Id: XM_038535253   ⟹   XP_038391181
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
Dog10K_Boxer_Tasha638,050,260 - 38,103,958 (-)NCBI
RefSeq Acc Id: XM_038540519   ⟹   XP_038396447
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0637,009,268 - 37,068,750 (-)NCBI
RefSeq Acc Id: XM_038540520   ⟹   XP_038396448
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0637,009,268 - 37,068,750 (-)NCBI
RefSeq Acc Id: XM_038540521   ⟹   XP_038396449
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0637,010,401 - 37,068,750 (-)NCBI
RefSeq Acc Id: XM_038540522   ⟹   XP_038396450
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0637,009,268 - 37,068,750 (-)NCBI
RefSeq Acc Id: XM_038540523   ⟹   XP_038396451
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0637,011,322 - 37,068,750 (-)NCBI
RefSeq Acc Id: XM_038540524   ⟹   XP_038396452
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0637,009,268 - 37,068,750 (-)NCBI
RefSeq Acc Id: XM_038540525   ⟹   XP_038396453
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0637,009,268 - 37,068,750 (-)NCBI
RefSeq Acc Id: XM_038540526   ⟹   XP_038396454
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UU_Cfam_GSD_1.0637,009,268 - 37,068,750 (-)NCBI
RefSeq Acc Id: XM_038604618   ⟹   XP_038460546
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0636,606,581 - 36,666,904 (-)NCBI
RefSeq Acc Id: XM_038604619   ⟹   XP_038460547
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0636,606,581 - 36,666,904 (-)NCBI
RefSeq Acc Id: XM_038604620   ⟹   XP_038460548
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0636,607,714 - 36,666,904 (-)NCBI
RefSeq Acc Id: XM_038604621   ⟹   XP_038460549
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0636,606,581 - 36,666,904 (-)NCBI
RefSeq Acc Id: XM_038604622   ⟹   XP_038460550
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0636,608,631 - 36,666,904 (-)NCBI
RefSeq Acc Id: XM_038604623   ⟹   XP_038460551
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0636,606,581 - 36,666,904 (-)NCBI
RefSeq Acc Id: XM_038604624   ⟹   XP_038460552
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0636,606,581 - 36,666,904 (-)NCBI
RefSeq Acc Id: XM_038604625   ⟹   XP_038460553
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
UNSW_CanFamBas_1.0636,606,581 - 36,666,904 (-)NCBI
RefSeq Acc Id: XM_038669306   ⟹   XP_038525234
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0636,919,892 - 36,979,309 (-)NCBI
RefSeq Acc Id: XM_038669307   ⟹   XP_038525235
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0636,919,892 - 36,979,309 (-)NCBI
RefSeq Acc Id: XM_038669308   ⟹   XP_038525236
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0636,921,025 - 36,979,309 (-)NCBI
RefSeq Acc Id: XM_038669309   ⟹   XP_038525237
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0636,919,892 - 36,979,309 (-)NCBI
RefSeq Acc Id: XM_038669310   ⟹   XP_038525238
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0636,921,946 - 36,979,309 (-)NCBI
RefSeq Acc Id: XM_038669311   ⟹   XP_038525239
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0636,919,892 - 36,979,309 (-)NCBI
RefSeq Acc Id: XM_038669312   ⟹   XP_038525240
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0636,919,892 - 36,979,309 (-)NCBI
RefSeq Acc Id: XM_038669313   ⟹   XP_038525241
Type: CODING
Position:
Dog AssemblyChrPosition (strand)Source
ROS_Cfam_1.0636,919,892 - 36,979,309 (-)NCBI
Protein Sequences
Protein RefSeqs XP_038335202 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335203 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335204 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335205 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335206 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335207 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335208 (Get FASTA)   NCBI Sequence Viewer  
  XP_038335209 (Get FASTA)   NCBI Sequence Viewer  
  XP_038391181 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396447 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396448 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396449 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396450 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396451 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396452 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396453 (Get FASTA)   NCBI Sequence Viewer  
  XP_038396454 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460546 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460547 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460548 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460549 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460550 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460551 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460552 (Get FASTA)   NCBI Sequence Viewer  
  XP_038460553 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525234 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525235 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525236 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525237 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525238 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525239 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525240 (Get FASTA)   NCBI Sequence Viewer  
  XP_038525241 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSCAFP00000007537.5
  ENSCAFP00000028319.4
  ENSCAFP00000047855.2
  ENSCAFP00000060789.2
  ENSCAFP00000060816.2
  ENSCAFP00030008200.1
  ENSCAFP00030008263.1
  ENSCAFP00030008347.1
  ENSCAFP00030008406.1
  ENSCAFP00030008465.1
  ENSCAFP00030008539.1
  ENSCAFP00030008608.1
  ENSCAFP00040021474.1
  ENSCAFP00040021588.1
  ENSCAFP00040021715.1
  ENSCAFP00040021824.1
  ENSCAFP00040021958.1
  ENSCAFP00845027036
  ENSCAFP00845027036.1
  ENSCAFP00845027161
  ENSCAFP00845027161.1
  ENSCAFP00845027323.1
  ENSCAFP00845027445.1
  ENSCAFP00845027559.1
  ENSCAFP00845027649
  ENSCAFP00845027649.1
Ensembl Acc Id: ENSCAFP00000028319   ⟸   ENSCAFT00000030479
Ensembl Acc Id: ENSCAFP00000047855   ⟸   ENSCAFT00000073728
Ensembl Acc Id: ENSCAFP00000048946   ⟸   ENSCAFT00000068160
Ensembl Acc Id: ENSCAFP00000066535   ⟸   ENSCAFT00000093788
Ensembl Acc Id: ENSCAFP00000057580   ⟸   ENSCAFT00000086962
Ensembl Acc Id: ENSCAFP00000007537   ⟸   ENSCAFT00000008138
Ensembl Acc Id: ENSCAFP00000060816   ⟸   ENSCAFT00000075006
Ensembl Acc Id: ENSCAFP00000060789   ⟸   ENSCAFT00000071932
RefSeq Acc Id: XP_038335207   ⟸   XM_038479279
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038335209   ⟸   XM_038479281
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038335205   ⟸   XM_038479277
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038335208   ⟸   XM_038479280
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038335202   ⟸   XM_038479274
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038335203   ⟸   XM_038479275
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038335204   ⟸   XM_038479276
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038335206   ⟸   XM_038479278
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038460551   ⟸   XM_038604623
- Peptide Label: isoform X5
RefSeq Acc Id: XP_038460553   ⟸   XM_038604625
- Peptide Label: isoform X7
RefSeq Acc Id: XP_038460549   ⟸   XM_038604621
- Peptide Label: isoform X3
RefSeq Acc Id: XP_038460552   ⟸   XM_038604624
- Peptide Label: isoform X6
RefSeq Acc Id: XP_038460546   ⟸   XM_038604618
- Peptide Label: isoform X1
RefSeq Acc Id: XP_038460547   ⟸   XM_038604619
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038460548   ⟸   XM_038604620
- Peptide Label: isoform X2
RefSeq Acc Id: XP_038460550   ⟸   XM_038604622
- Peptide Label: isoform X4
RefSeq Acc Id: XP_038525239   ⟸   XM_038669311
- Peptide Label: isoform X5
- UniProtKB: A0A8C0LHQ3 (UniProtKB/TrEMBL),   A0A8C0SKK2 (UniProtKB/TrEMBL),   A0A8C0MKX1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525241   ⟸   XM_038669313
- Peptide Label: isoform X7
- UniProtKB: A0A8C0MER9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525237   ⟸   XM_038669309
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LJZ0 (UniProtKB/TrEMBL),   A0A8C0SIN6 (UniProtKB/TrEMBL),   A0A8C0MFG2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525240   ⟸   XM_038669312
- Peptide Label: isoform X6
- UniProtKB: A0A8C0LLT4 (UniProtKB/TrEMBL),   A0A8C0SIZ7 (UniProtKB/TrEMBL),   A0A8C0MFG2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525234   ⟸   XM_038669306
- Peptide Label: isoform X1
- UniProtKB: A0A8C0ME61 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525235   ⟸   XM_038669307
- Peptide Label: isoform X2
- UniProtKB: A0A8C0MH28 (UniProtKB/TrEMBL),   A0A8C0MER9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525236   ⟸   XM_038669308
- Peptide Label: isoform X2
- UniProtKB: A0A8C0MH28 (UniProtKB/TrEMBL),   A0A8C0MER9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038525238   ⟸   XM_038669310
- Peptide Label: isoform X4
- UniProtKB: A0A8C0MFG2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038391181   ⟸   XM_038535253
- Peptide Label: isoform X8
- UniProtKB: A0A8P0T0Q8 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396452   ⟸   XM_038540524
- Peptide Label: isoform X5
- UniProtKB: A0A8C0LHQ3 (UniProtKB/TrEMBL),   A0A8C0MKX1 (UniProtKB/TrEMBL),   A0A8C0SKK2 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396454   ⟸   XM_038540526
- Peptide Label: isoform X7
- UniProtKB: A0A8C0MER9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396450   ⟸   XM_038540522
- Peptide Label: isoform X3
- UniProtKB: A0A8C0LJZ0 (UniProtKB/TrEMBL),   A0A8C0MFG2 (UniProtKB/TrEMBL),   A0A8C0SIN6 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396453   ⟸   XM_038540525
- Peptide Label: isoform X6
- UniProtKB: A0A8C0LLT4 (UniProtKB/TrEMBL),   A0A8C0MFG2 (UniProtKB/TrEMBL),   A0A8C0SIZ7 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396447   ⟸   XM_038540519
- Peptide Label: isoform X1
- UniProtKB: A0A8C0ME61 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396448   ⟸   XM_038540520
- Peptide Label: isoform X2
- UniProtKB: A0A8C0MER9 (UniProtKB/TrEMBL),   A0A8C0MH28 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396449   ⟸   XM_038540521
- Peptide Label: isoform X2
- UniProtKB: A0A8C0MER9 (UniProtKB/TrEMBL),   A0A8C0MH28 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_038396451   ⟸   XM_038540523
- Peptide Label: isoform X4
- UniProtKB: A0A8C0MFG2 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSCAFP00845027036   ⟸   ENSCAFT00845034515
Ensembl Acc Id: ENSCAFP00845027161   ⟸   ENSCAFT00845034679
Ensembl Acc Id: ENSCAFP00845027323   ⟸   ENSCAFT00845034886
Ensembl Acc Id: ENSCAFP00845027559   ⟸   ENSCAFT00845035207
Ensembl Acc Id: ENSCAFP00845027445   ⟸   ENSCAFT00845035054
Ensembl Acc Id: ENSCAFP00845027649   ⟸   ENSCAFT00845035324
Protein Domains
RING-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSCAFG00000019201 Ensembl, UniProtKB/TrEMBL
  ENSCAFG00030005077 UniProtKB/TrEMBL
  ENSCAFG00040013333 UniProtKB/TrEMBL
  ENSCAFG00845019549 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSCAFT00000008138.6 UniProtKB/TrEMBL
  ENSCAFT00000030479.4 UniProtKB/TrEMBL
  ENSCAFT00000071932.2 UniProtKB/TrEMBL
  ENSCAFT00000073728.2 UniProtKB/TrEMBL
  ENSCAFT00000075006.2 UniProtKB/TrEMBL
  ENSCAFT00030009358.1 UniProtKB/TrEMBL
  ENSCAFT00030009439.1 UniProtKB/TrEMBL
  ENSCAFT00030009546.1 UniProtKB/TrEMBL
  ENSCAFT00030009617.1 UniProtKB/TrEMBL
  ENSCAFT00030009684.1 UniProtKB/TrEMBL
  ENSCAFT00030009759.1 UniProtKB/TrEMBL
  ENSCAFT00030009838.1 UniProtKB/TrEMBL
  ENSCAFT00040024705.1 UniProtKB/TrEMBL
  ENSCAFT00040024832.1 UniProtKB/TrEMBL
  ENSCAFT00040024974.1 UniProtKB/TrEMBL
  ENSCAFT00040025109.1 UniProtKB/TrEMBL
  ENSCAFT00040025261.1 UniProtKB/TrEMBL
  ENSCAFT00845034515 ENTREZGENE
  ENSCAFT00845034515.1 UniProtKB/TrEMBL
  ENSCAFT00845034679 ENTREZGENE
  ENSCAFT00845034679.1 UniProtKB/TrEMBL
  ENSCAFT00845034886.1 UniProtKB/TrEMBL
  ENSCAFT00845035054.1 UniProtKB/TrEMBL
  ENSCAFT00845035207.1 UniProtKB/TrEMBL
  ENSCAFT00845035324 ENTREZGENE
  ENSCAFT00845035324.1 UniProtKB/TrEMBL
Gene3D-CATH 3.30.40.10 UniProtKB/TrEMBL
InterPro MGRN1/RNF157-like UniProtKB/TrEMBL
  Znf_RING UniProtKB/TrEMBL
  Znf_RING/FYVE/PHD UniProtKB/TrEMBL
NCBI Gene MGRN1 ENTREZGENE
PANTHER E3 UBIQUITIN-PROTEIN LIGASE MGRN1 UniProtKB/TrEMBL
  PTHR22996 UniProtKB/TrEMBL
Pfam zf-C3HC4_3 UniProtKB/TrEMBL
PROSITE ZF_RING_2 UniProtKB/TrEMBL
SMART RING UniProtKB/TrEMBL
Superfamily-SCOP RING/U-box UniProtKB/TrEMBL
UniProt A0A8C0LHQ3 ENTREZGENE
  A0A8C0LJZ0 ENTREZGENE
  A0A8C0LLT4 ENTREZGENE
  A0A8C0ME61 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0MEC5_CANLF UniProtKB/TrEMBL
  A0A8C0MER9 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0MFG2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0MGL6_CANLF UniProtKB/TrEMBL
  A0A8C0MH28 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0MKX1 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SHJ4_CANLF UniProtKB/TrEMBL
  A0A8C0SHN0_CANLF UniProtKB/TrEMBL
  A0A8C0SIN6 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SIZ7 ENTREZGENE, UniProtKB/TrEMBL
  A0A8C0SKK2 ENTREZGENE, UniProtKB/TrEMBL
  A0A8I3P649_CANLF UniProtKB/TrEMBL
  A0A8I3P669_CANLF UniProtKB/TrEMBL
  A0A8I3P7N3_CANLF UniProtKB/TrEMBL
  A0A8I3S421_CANLF UniProtKB/TrEMBL
  A0A8I3S466_CANLF UniProtKB/TrEMBL
  A0A8I3S486_CANLF UniProtKB/TrEMBL
  A0A8P0N7S2_CANLF UniProtKB/TrEMBL
  A0A8P0NKC1_CANLF UniProtKB/TrEMBL
  A0A8P0T0Q8 ENTREZGENE, UniProtKB/TrEMBL
  A0A8P0TCM5_CANLF UniProtKB/TrEMBL
  A0A8P0TCR3_CANLF UniProtKB/TrEMBL
VGNC ID VGNC:43214 ENTREZGENE