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Gene: POMGNT1 (protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)) Canis lupus familiaris

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Symbol:

POMGNT1

Name:

protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)

RGD ID:

12119676

Description:

ENCODES a protein that exhibits acetylglucosaminyltransferase activity (inferred); beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity (inferred); carbohydrate binding (inferred); INVOLVED IN basement membrane organization (ortholog); brain development (ortholog); dentate gyrus development (ortholog); ASSOCIATED WITH autism spectrum disorder (ortholog); autosomal recessive limb-girdle muscular dystrophy (ortholog); autosomal recessive limb-girdle muscular dystrophy type 2O (ortholog); FOUND IN Golgi apparatus (inferred); Golgi membrane (inferred); membrane (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

protein O-linked mannose beta1,2-N-acetylglucosaminyltransferase; protein O-linked-mannose beta-1,2-N-acetylglucosaminyltransferase 1

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	14,176,932 - 14,187,181 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	14,178,357 - 14,187,161 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	14,299,079 - 14,309,089 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	14,329,378 - 14,339,540 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	14,329,801 - 14,339,540 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	14,130,602 - 14,140,611 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	14,199,089 - 14,209,095 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	14,268,643 - 14,278,728 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

autism spectrum disorder (ISO)

autosomal recessive limb-girdle muscular dystrophy (ISO)

autosomal recessive limb-girdle muscular dystrophy type 2O (ISO)

Charcot-Marie-Tooth disease dominant intermediate C (ISO)

congenital muscular dystrophy (ISO)

congenital muscular dystrophy-dystroglycanopathy type A (ISO)

congenital muscular dystrophy-dystroglycanopathy type A3 (ISO)

developmental and epileptic encephalopathy (ISO)

early infantile epileptic encephalopathy (ISO)

fundus dystrophy (ISO)

genetic disease (ISO)

Gliosis (ISO)

hydrocephalus (ISO)

intellectual disability (ISO)

limb-girdle muscular dystrophy (ISO)

lissencephaly (ISO)

Muscle Hypotonia (ISO)

muscular dystrophy (ISO)

muscular dystrophy-dystroglycanopathy (ISO)

muscular dystrophy-dystroglycanopathy type B1 (ISO)

muscular dystrophy-dystroglycanopathy type B3 (ISO)

muscular dystrophy-dystroglycanopathy type B6 (ISO)

Nervous System Malformations (ISO)

optic atrophy (ISO)

phenylketonuria (ISO)

Retinitis Pigmentosa 76 (ISO)

Walker-Warburg syndrome (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

basement membrane organization (IEA,ISO)

brain development (IEA,ISO)

dentate gyrus development (IEA,ISO)

gene expression (IEA,ISO)

localization of cell (IEA,ISO)

myelination (IEA,ISO)

O-glycan processing (IBA,IEA)

protein glycosylation (IEA,ISO)

protein modification process (IEA,ISO)

protein O-linked glycosylation (IEA,ISO)

protein O-linked mannosylation (IEA,ISO)

reactive gliosis (IEA,ISO)

sensory perception of sound (IEA,ISO)

Cellular Component

Golgi apparatus (IEA)

Golgi membrane (IBA,IEA)

membrane (IEA)

Molecular Function

acetylglucosaminyltransferase activity (IEA)

beta-1,3-galactosyl-O-glycosyl-glycoprotein beta-1,3-N-acetylglucosaminyltransferase activity (IBA,IEA)

carbohydrate binding (IEA)

glycosyltransferase activity (IEA)

manganese ion binding (IEA)

metal ion binding (IEA)

protein binding (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

POMGNT1
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	15	14,176,932 - 14,187,181 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	15	14,178,357 - 14,187,161 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	15	14,299,079 - 14,309,089 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	15	14,329,378 - 14,339,540 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	15	14,329,801 - 14,339,540 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	15	14,130,602 - 14,140,611 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	15	14,199,089 - 14,209,095 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	15	14,268,643 - 14,278,728 (+)	NCBI		UU_Cfam_GSD_1.0

POMGNT1
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	46,188,683 - 46,220,305 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	46,188,683 - 46,220,305 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	46,654,355 - 46,685,977 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	46,426,940 - 46,436,708 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	44,941,643 - 44,973,721 (-)	NCBI		Celera
Cytogenetic Map	1	p34.1	NCBI
HuRef	1	44,769,330 - 44,801,277 (-)	NCBI		HuRef
CHM1_1	1	46,771,477 - 46,803,118 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	1	46,065,903 - 46,097,522 (-)	NCBI		T2T-CHM13v2.0

Pomgnt1
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	4	116,007,700 - 116,017,041 (+)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	4	115,981,037 - 116,017,046 (+)	Ensembl		GRCm39 Ensembl
GRCm38	4	116,150,498 - 116,159,844 (+)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	4	116,123,840 - 116,159,849 (+)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	4	115,823,123 - 115,832,449 (+)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	4	115,648,457 - 115,657,776 (+)	NCBI		MGSCv36	mm8
Celera	4	114,888,693 - 114,898,002 (+)	NCBI		Celera
Cytogenetic Map	4	D1	NCBI
cM Map	4	53.1	NCBI

Pomgnt1
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	5	134,870,971 - 134,880,864 (+)	NCBI		GRCr8
mRatBN7.2	5	129,634,274 - 129,644,150 (+)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	5	129,634,294 - 129,644,149 (+)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	5	132,250,551 - 132,260,368 (+)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	5	134,005,138 - 134,014,956 (+)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	5	134,027,575 - 134,037,392 (+)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	5	135,007,343 - 135,017,220 (+)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	5	135,007,343 - 135,017,218 (+)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	5	138,791,235 - 138,801,112 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	5	136,429,379 - 136,439,254 (+)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	5	136,434,604 - 136,444,480 (+)	NCBI
Celera	5	128,162,654 - 128,172,461 (+)	NCBI		Celera
Cytogenetic Map	5	q35	NCBI

Pomgnt1
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955464	12,077,406 - 12,086,700 (+)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955464	12,076,815 - 12,086,961 (+)	NCBI	ChiLan1.0	ChiLan1.0

POMGNT1
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	180,584,412 - 180,616,625 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	179,726,026 - 179,758,221 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	45,494,834 - 45,525,804 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	46,849,528 - 46,859,137 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	46,849,528 - 46,859,137 (-)	Ensembl	panpan1.1		panPan2

Pomgnt1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024405058	61,404,486 - 61,417,843 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936474	27,229,113 - 27,239,123 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936474	27,229,262 - 27,239,034 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

POMGNT1
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	165,212,833 - 165,222,409 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	165,212,828 - 165,222,412 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	152,692,300 - 152,701,877 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

POMGNT1
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	20	86,588,049 - 86,597,576 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	20	86,588,550 - 86,599,107 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666033	30,389,152 - 30,398,705 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Pomgnt1
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624906	2,119,684 - 2,135,656 (-)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624906	2,120,759 - 2,131,024 (-)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in POMGNT1
89 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_014119592	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038450208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038450217	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038450238	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038495803	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038495804	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038495805	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038495806	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038558177	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038558178	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038558179	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038558180	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038622052	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038622053	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038622054	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038622055	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038687797	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038687798	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038687799	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038687800	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000161	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000020	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000372	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000015	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000006914 ⟹ ENSCAFP00000006400

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	15	14,178,357 - 14,187,161 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000063145 ⟹ ENSCAFP00000055917

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	15	14,178,357 - 14,181,666 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845035710 ⟹ ENSCAFP00845027940

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	15	14,329,801 - 14,339,540 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845035846 ⟹ ENSCAFP00845028048

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	15	14,329,801 - 14,334,026 (+)	Ensembl

RefSeq Acc Id:

XM_014119592 ⟹ XP_013975067

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	15	14,176,932 - 14,187,181 (+)	NCBI
Dog10K_Boxer_Tasha	15	14,299,079 - 14,309,089 (+)	NCBI

Sequence:

show sequence

GAGTTCTAGCTCCCCCAGCTTTGTGCCCTGGGGCCTCATTACTAATAATATCTACCTCAAGGAG
CCGTTGTGGAACGAAATGAGCTGATGCCGGCCAAGTGCTTGGAACGGTGACTGCACGGCGTAAG
CATCCTATTCCTGAAGGCATGGGTTGGCCAGGACAGTGGTGACTCCCCAACCCGGCATGGACGA
CTGGAAGCCCAGCTCCCTCATCAAGCCCTTTGGGGCTCGGAAGAAGCGGAGCTGGTATCTTACC
TGGAAGTACAAACTGACCAACCAGCGGGCTTTGCGCAGGCTTTGTCAGACAGGGGCAGTGCTTT
TCCTACTGGTGACCGTCATTGTCAACATTAAGTTGATCCTGGACACGCGGCGAGCAATCAGCGA
AGCCAATGGAGACCCGGAGCCAGAGCAAGACTATGATGAGGCCCTGGGCCGATTAGAGCCCTCA
CGGCGCAGAGGCAGTGGTCCCCGACGCGTTCTGGATGTGGAGGTGTACTCAAGCCGCAGCAAAG
TATATGTGGCAGTGGATGGCACTACGGTGCTGGAGGACGAGGCTCGGGAGCAGGGCCGTGGCAT
CCATGTCATCGTTCTCAACCAGGCTACGGGCCATGTGATGGCAAAGCGTGTATTTGACACATAC
TCACCTCATGAGGATGAGGCCATGGTGCTGTTCCTCAACATGGTGGCGCCTGGCCGAGTACTTA
TCTGCACTGTCAAGGACGAGGGCTCCTTCCACCTCAAGGACACAGCCAAGGCTCTGCTGAGGAG
CCTGGGCAGCCAGGCCGGCCCTGCCCTTGGCTGGAGGGACACTTGGGCCTTTGTGGGACGCAAA
GGAGGTCCTGTCCTTGGGGAGAAACATTCTAAGTCACCTGCCCTCTCCTCCTGGGGGGACCCAG
TCCTGCTGAAGACAGATGTGCCGCTGAGCTCAGCAGAAGAGGCCGAGTGCCACTGGGCAGACAC
AGAGCTGAACCGTCGCCGCCGGCGCTTCTGCAGCAAAGTCGAGGGCTATGGGAGTGTGTGCAGC
TGCAAGGACCCCACACCCATCGAGTTCAGCCCTGACCCACTCCCAGACAACAATGTCCTCAATG
TGCCTGTGGCTGTCATTGCAGGGAACCGGCCCAATTACTTGTATAGGATGCTGCGCTCTCTGCT
CTCAGCCCAGGGGGTGTCCCCCCAGATGATAACAGTTTTCATTGATGGCTACTACGAGGAGCCA
ATGGATGTGGTGGCACTGTTTGGTCTGAGGGGCATCCAGCACACTCCCATCAGCATCAAGAACG
CCCGTGTGTCTCAGCACTACAAAGCCAGCCTCACTGCCACTTTCAACCTGTTTCCGGAAGCCAG
GTTTGCCGTGGTCCTGGAAGAGGACTTGGACATTGCTGTGGATTTTTTCAGTTTCCTGAGCCAA
TCCATCCACCTACTGGAGGAGGATGACAGCCTGTACTGTATCTCTGCCTGGAATGACCAGGGAT
ACGAACACACGGCTGAGGACCCAGCACTGCTGTACCGTGTGGAGACCATGCCTGGGCTGGGCTG
GGTGCTCAGGAAGTCCTTGTACAAGGAGGAGCTTGAGCCCAAGTGGCCCACACCAGAAAAGCTC
TGGGACTGGGACATGTGGATGCGGATGCCCGAACAACGCCGAGGCCGAGAGTGCATCATCCCCG
ATGTTTCCCGATCCTACCACTTCGGCATCGTTGGCCTCAACATGAACGGCTACTTCCACGAGGC
CTACTTCAAGAAGCACAAGTTCAACACGGTTCCAGGTGTCCAGCTCAGGAACGTGGACAGTCTG
AAGAAGGAAGCTTATGAAGTGGAAATTCACAGGCTGCTCAGTGAGGCTGAGGTTCTGGACCACA
GCAGGAACCCTTGTGAAGACTCTTTCCTGCCAGACACAGAGGGCCACACCTATGTGGCCTTCAT
CCGAATGGAGAAGGATGATGACTTCACCACCTGGACCCAGCTTGCCAAGTGCCTCCATATCTGG
GACCTGGATGTGCGTGGCAACCACCGGGGCCTGTGGAGGTTGTTTCGAAAGAAGAATCACTTCC
TGGTGGTGGGCGTCCCAGCCTCCCCCTACTCGGTGAAGAAGCCACCATCAATCACCCCAATTTT
CCTGGAGCCACCTCCAAAGGAAGAGGGAGTCCCAGGAGCCGCAGAACAGACATGAGACCTCCTT
CAGGACCCTGCAGGGCTGGGTACTGTGTACCCCCAGGCAGGCTAGCCCTTCACCCCATCCTGTA
GGATTTTGTAGACACTGGTCGGGGTTGGCGCTGGCTTGTTTTTAACATGAGACTTAATTACTAA
CCCAAAGGGGAGGCTTCCCCTGCTCCAACGCCCATATACCTGAGTTGGAGGTCTATTTATTTAC
TTCCCTGTTGGGAAGGGGCAGGATAGTACCTGGGAATCATTGGGGTCCCTGGGCAGCTGATCCT
GCCCTTTGCACACACCCTCCTCCCAGGCCTGGCTCAGAATCTAACCTATTTATTGACTGTCCTG
AGGGCCTTGGGAACAGGCTGAAGCCTATAGGGCCTTGACTCCTTTCTTGGCTGGGGTGCTGCCC
TGAGGGTGGGGCTGGCTCTTACTCAGGAACCTGCTGTGCCCAACCCATGGACAGGCCCGCTGGG
GCCCGCCTGCTGATGCAGACTCACTCAGAGACCCTCAGACACGGAACCAGGCCTCTTCTCAGCC
TCCCCTTTGTCCAGGTTTCCAAAGCTGGATAAGGTGGTCATTGATTAAAAAAGGAGAAAACCTC
CA

hide sequence

RefSeq Acc Id:

XM_038450208 ⟹ XP_038306136

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	15	14,299,505 - 14,309,089 (+)	NCBI

RefSeq Acc Id:

XM_038450217 ⟹ XP_038306145

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	15	14,299,520 - 14,309,089 (+)	NCBI

RefSeq Acc Id:

XM_038450238 ⟹ XP_038306166

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	15	14,300,667 - 14,309,089 (+)	NCBI

RefSeq Acc Id:

XM_038495803 ⟹ XP_038351731

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	15	14,131,028 - 14,140,611 (+)	NCBI

RefSeq Acc Id:

XM_038495804 ⟹ XP_038351732

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	15	14,131,043 - 14,140,611 (+)	NCBI

RefSeq Acc Id:

XM_038495805 ⟹ XP_038351733

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	15	14,130,602 - 14,140,611 (+)	NCBI

RefSeq Acc Id:

XM_038495806 ⟹ XP_038351734

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	15	14,132,189 - 14,140,611 (+)	NCBI

RefSeq Acc Id:

XM_038558177 ⟹ XP_038414105

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	15	14,269,069 - 14,278,728 (+)	NCBI

RefSeq Acc Id:

XM_038558178 ⟹ XP_038414106

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	15	14,269,084 - 14,278,728 (+)	NCBI

RefSeq Acc Id:

XM_038558179 ⟹ XP_038414107

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	15	14,268,643 - 14,278,728 (+)	NCBI

RefSeq Acc Id:

XM_038558180 ⟹ XP_038414108

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	15	14,270,305 - 14,278,728 (+)	NCBI

RefSeq Acc Id:

XM_038622052 ⟹ XP_038477980

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	15	14,199,515 - 14,209,095 (+)	NCBI

RefSeq Acc Id:

XM_038622053 ⟹ XP_038477981

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	15	14,199,530 - 14,209,095 (+)	NCBI

RefSeq Acc Id:

XM_038622054 ⟹ XP_038477982

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	15	14,199,089 - 14,209,095 (+)	NCBI

RefSeq Acc Id:

XM_038622055 ⟹ XP_038477983

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	15	14,200,671 - 14,209,095 (+)	NCBI

RefSeq Acc Id:

XM_038687797 ⟹ XP_038543725

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	14,329,804 - 14,339,540 (+)	NCBI

RefSeq Acc Id:

XM_038687798 ⟹ XP_038543726

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	14,329,820 - 14,339,540 (+)	NCBI

RefSeq Acc Id:

XM_038687799 ⟹ XP_038543727

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	14,329,378 - 14,339,540 (+)	NCBI

RefSeq Acc Id:

XM_038687800 ⟹ XP_038543728

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	15	14,331,115 - 14,339,540 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_013975067	(Get FASTA)	NCBI Sequence Viewer
	XP_038306136	(Get FASTA)	NCBI Sequence Viewer
	XP_038306145	(Get FASTA)	NCBI Sequence Viewer
	XP_038306166	(Get FASTA)	NCBI Sequence Viewer
	XP_038351731	(Get FASTA)	NCBI Sequence Viewer
	XP_038351732	(Get FASTA)	NCBI Sequence Viewer
	XP_038351733	(Get FASTA)	NCBI Sequence Viewer
	XP_038351734	(Get FASTA)	NCBI Sequence Viewer
	XP_038414105	(Get FASTA)	NCBI Sequence Viewer
	XP_038414106	(Get FASTA)	NCBI Sequence Viewer
	XP_038414107	(Get FASTA)	NCBI Sequence Viewer
	XP_038414108	(Get FASTA)	NCBI Sequence Viewer
	XP_038477980	(Get FASTA)	NCBI Sequence Viewer
	XP_038477981	(Get FASTA)	NCBI Sequence Viewer
	XP_038477982	(Get FASTA)	NCBI Sequence Viewer
	XP_038477983	(Get FASTA)	NCBI Sequence Viewer
	XP_038543725	(Get FASTA)	NCBI Sequence Viewer
	XP_038543726	(Get FASTA)	NCBI Sequence Viewer
	XP_038543727	(Get FASTA)	NCBI Sequence Viewer
	XP_038543728	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000006400.6
	ENSCAFP00000055917.1
	ENSCAFP00030030093.1
	ENSCAFP00030030182.1
	ENSCAFP00030030351.1
	ENSCAFP00030030437.1
	ENSCAFP00040026476.1
	ENSCAFP00040026618.1
	ENSCAFP00845027940
	ENSCAFP00845027940.1
	ENSCAFP00845028048.1

RefSeq Acc Id:	XP_013975067 ⟸ XM_014119592
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KR70 (UniProtKB/TrEMBL), A0A8C0SW67 (UniProtKB/TrEMBL), A0A8I3P946 (UniProtKB/TrEMBL), A0A8C0P5W8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDDWKPSSLIKPFGARKKRSWYLTWKYKLTNQRALRRLCQTGAVLFLLVTVIVNIKLILDTRRA ISEANGDPEPEQDYDEALGRLEPSRRRGSGPRRVLDVEVYSSRSKVYVAVDGTTVLEDEAREQG RGIHVIVLNQATGHVMAKRVFDTYSPHEDEAMVLFLNMVAPGRVLICTVKDEGSFHLKDTAKAL LRSLGSQAGPALGWRDTWAFVGRKGGPVLGEKHSKSPALSSWGDPVLLKTDVPLSSAEEAECHW ADTELNRRRRRFCSKVEGYGSVCSCKDPTPIEFSPDPLPDNNVLNVPVAVIAGNRPNYLYRMLR SLLSAQGVSPQMITVFIDGYYEEPMDVVALFGLRGIQHTPISIKNARVSQHYKASLTATFNLFP EARFAVVLEEDLDIAVDFFSFLSQSIHLLEEDDSLYCISAWNDQGYEHTAEDPALLYRVETMPG LGWVLRKSLYKEELEPKWPTPEKLWDWDMWMRMPEQRRGRECIIPDVSRSYHFGIVGLNMNGYF HEAYFKKHKFNTVPGVQLRNVDSLKKEAYEVEIHRLLSEAEVLDHSRNPCEDSFLPDTEGHTYV AFIRMEKDDDFTTWTQLAKCLHIWDLDVRGNHRGLWRLFRKKNHFLVVGVPASPYSVKKPPSIT PIFLEPPPKEEGVPGAAEQT hide sequence

Ensembl Acc Id:

ENSCAFP00000055917 ⟸ ENSCAFT00000063145

Ensembl Acc Id:

ENSCAFP00000006400 ⟸ ENSCAFT00000006914

RefSeq Acc Id:	XP_038351733 ⟸ XM_038495805
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038351731 ⟸ XM_038495803
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038351732 ⟸ XM_038495804
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038351734 ⟸ XM_038495806
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038477982 ⟸ XM_038622054
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038477980 ⟸ XM_038622052
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038477981 ⟸ XM_038622053
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038477983 ⟸ XM_038622055
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038543727 ⟸ XM_038687799
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KR70 (UniProtKB/TrEMBL), A0A8C0SW67 (UniProtKB/TrEMBL), A0A8I3P946 (UniProtKB/TrEMBL), A0A8C0P5W8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038543725 ⟸ XM_038687797
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KR70 (UniProtKB/TrEMBL), A0A8C0SW67 (UniProtKB/TrEMBL), A0A8I3P946 (UniProtKB/TrEMBL), A0A8C0P5W8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038543726 ⟸ XM_038687798
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KR70 (UniProtKB/TrEMBL), A0A8C0SW67 (UniProtKB/TrEMBL), A0A8I3P946 (UniProtKB/TrEMBL), A0A8C0P5W8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038543728 ⟸ XM_038687800
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038306136 ⟸ XM_038450208
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KR70 (UniProtKB/TrEMBL), A0A8C0SW67 (UniProtKB/TrEMBL), A0A8I3P946 (UniProtKB/TrEMBL), A0A8C0P5W8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038306145 ⟸ XM_038450217
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KR70 (UniProtKB/TrEMBL), A0A8C0SW67 (UniProtKB/TrEMBL), A0A8I3P946 (UniProtKB/TrEMBL), A0A8C0P5W8 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038306166 ⟸ XM_038450238
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038414107 ⟸ XM_038558179
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KR70 (UniProtKB/TrEMBL), A0A8C0P5W8 (UniProtKB/TrEMBL), A0A8C0SW67 (UniProtKB/TrEMBL), A0A8I3P946 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038414105 ⟸ XM_038558177
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KR70 (UniProtKB/TrEMBL), A0A8C0P5W8 (UniProtKB/TrEMBL), A0A8C0SW67 (UniProtKB/TrEMBL), A0A8I3P946 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038414106 ⟸ XM_038558178
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KR70 (UniProtKB/TrEMBL), A0A8C0P5W8 (UniProtKB/TrEMBL), A0A8C0SW67 (UniProtKB/TrEMBL), A0A8I3P946 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038414108 ⟸ XM_038558180
- Peptide Label:	isoform X2

Ensembl Acc Id:

ENSCAFP00845028048 ⟸ ENSCAFT00845035846

Ensembl Acc Id:

ENSCAFP00845027940 ⟸ ENSCAFT00845035710

Protein Domains

ILEI/PANDER

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000004294	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030018746	UniProtKB/TrEMBL
	ENSCAFG00040016477	UniProtKB/TrEMBL
	ENSCAFG00845020251	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000006914.6	UniProtKB/TrEMBL
	ENSCAFT00000063145.2	UniProtKB/TrEMBL
	ENSCAFT00030034507.1	UniProtKB/TrEMBL
	ENSCAFT00030034605.1	UniProtKB/TrEMBL
	ENSCAFT00030034806.1	UniProtKB/TrEMBL
	ENSCAFT00030034906.1	UniProtKB/TrEMBL
	ENSCAFT00040030462.1	UniProtKB/TrEMBL
	ENSCAFT00040030624.1	UniProtKB/TrEMBL
	ENSCAFT00845035710	ENTREZGENE
	ENSCAFT00845035710.1	UniProtKB/TrEMBL
	ENSCAFT00845035846.1	UniProtKB/TrEMBL
Gene3D-CATH	Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A	UniProtKB/TrEMBL
InterPro	Glyco_trans_13	UniProtKB/TrEMBL
	ILEI/PANDER_dom	UniProtKB/TrEMBL
	Nucleotide-diphossugar_trans	UniProtKB/TrEMBL
	O-linked_mannose_GnT	UniProtKB/TrEMBL
	POMGNT1_PANDER-like	UniProtKB/TrEMBL
KEGG Report	cfa:482511	UniProtKB/TrEMBL
NCBI Gene	POMGNT1	ENTREZGENE
PANTHER	PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1	UniProtKB/TrEMBL
	PROTEIN O-LINKED-MANNOSE BETA-1,2-N-ACETYLGLUCOSAMINYLTRANSFERASE 1	UniProtKB/TrEMBL
Pfam	GNT-I	UniProtKB/TrEMBL
	ILEI	UniProtKB/TrEMBL
PROSITE	GG_LECTIN	UniProtKB/TrEMBL
Superfamily-SCOP	SSF53448	UniProtKB/TrEMBL
UniProt	A0A8C0KR70	ENTREZGENE
	A0A8C0NY26_CANLF	UniProtKB/TrEMBL
	A0A8C0P1Q4_CANLF	UniProtKB/TrEMBL
	A0A8C0P5W8	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0SW67	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3P946	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3P9E0_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:54221	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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