Advanced Search (OLGA)

Gene: EIF3A (eukaryotic translation initiation factor 3 subunit A) Canis lupus familiaris

Subscribe to Updates

Analyze

Symbol:

EIF3A

Name:

eukaryotic translation initiation factor 3 subunit A

RGD ID:

12086958

Description:

ENCODES a protein that exhibits receptor tyrosine kinase binding (ortholog); INVOLVED IN negative regulation of ERK1 and ERK2 cascade (ortholog); PARTICIPATES IN translation initiation pathway; ASSOCIATED WITH Prostatic Neoplasms (ortholog); FOUND IN microtubule (ortholog); INTERACTS WITH masitinib

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

EIF3S10; eukaryotic translation initiation factor 3, subunit 10 theta, 150/170kDa

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	29,290,668 - 29,326,851 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	29,291,422 - 29,326,701 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	29,432,879 - 29,469,314 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	29,821,606 - 29,857,976 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	29,821,622 - 29,857,939 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	29,375,678 - 29,411,864 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	29,395,449 - 29,431,740 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	29,589,681 - 29,626,027 (-)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
EIF3A	Dog	Prostatic Neoplasms		ISO	RGD:1316362	9068941	CTD Direct Evidence: marker/mechanism	CTD	PMID:17013881

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
EIF3A	Dog	masitinib	decreases expression	EXP		6480464	masitinib results in decreased expression of EIF3A protein	CTD	PMID:22747577

Biological Process

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
EIF3A	Dog	cytoplasmic translational initiation	involved_in	IEA	UniRule:UR000106208	150520179		UniProt	GO_REF:0000104
EIF3A	Dog	formation of cytoplasmic translation initiation complex	involved_in	IEA	UniProtKB:P23116\|UniProtKB:Q14152\|ensembl:ENSMUSP00000025955\|ensembl:ENSP00000358140	150520179		Ensembl	GO_REF:0000107
EIF3A	Dog	formation of cytoplasmic translation initiation complex	involved_in	IBA	MGI:95301\|PANTHER:PTN000360893\|UniProtKB:Q14152	150520179		GO_Central	GO_REF:0000033
EIF3A	Dog	formation of cytoplasmic translation initiation complex	involved_in	IEA	UniRule:UR000106208	150520179		UniProt	GO_REF:0000104
EIF3A	Dog	IRES-dependent viral translational initiation	involved_in	IEA	UniProtKB:Q14152\|ensembl:ENSP00000358140	150520179		Ensembl	GO_REF:0000107
EIF3A	Dog	negative regulation of ERK1 and ERK2 cascade		ISO	RGD:1307269	9068941		RGD	PMID:22025682\|REF_RGD_ID:10755441
EIF3A	Dog	translation	involved_in	IEA	UniProtKB-KW:KW-0648	150520179		UniProt	GO_REF:0000043
EIF3A	Dog	translation reinitiation	involved_in	IBA	PANTHER:PTN000360893\|SGD:S000000283	150520179		GO_Central	GO_REF:0000033
EIF3A	Dog	translational initiation	involved_in	IEA	UniProtKB-KW:KW-0396	150520179		UniProt	GO_REF:0000043
EIF3A	Dog	viral translational termination-reinitiation	involved_in	IEA	UniProtKB:Q14152\|ensembl:ENSP00000358140	150520179		Ensembl	GO_REF:0000107

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
EIF3A	Dog	cytoplasm	located_in	IEA	UniProtKB-SubCell:SL-0086	150520179		UniProt	GO_REF:0000044
EIF3A	Dog	cytoplasm	located_in	IEA	UniProtKB-KW:KW-0963	150520179		UniProt	GO_REF:0000043
EIF3A	Dog	cytoplasm	located_in	IEA	UniRule:UR000106208	150520179		UniProt	GO_REF:0000104
EIF3A	Dog	cytosol	located_in	IEA	UniProtKB:Q14152\|ensembl:ENSP00000358140	150520179		Ensembl	GO_REF:0000107
EIF3A	Dog	eukaryotic 43S preinitiation complex	part_of	IEA	UniRule:UR000106208	150520179		UniProt	GO_REF:0000104
EIF3A	Dog	eukaryotic 48S preinitiation complex	part_of	IEA	UniRule:UR000106208	150520179		UniProt	GO_REF:0000104
EIF3A	Dog	eukaryotic translation initiation factor 3 complex	part_of	IEA	UniProtKB:P23116\|UniProtKB:Q14152\|ensembl:ENSMUSP00000025955\|ensembl:ENSP00000358140	150520179		Ensembl	GO_REF:0000107
EIF3A	Dog	eukaryotic translation initiation factor 3 complex	part_of	IEA	UniRule:UR000106208	150520179		UniProt	GO_REF:0000104
EIF3A	Dog	eukaryotic translation initiation factor 3 complex	part_of	IEA	InterPro:IPR027512	150520179		InterPro	GO_REF:0000002
EIF3A	Dog	eukaryotic translation initiation factor 3 complex, eIF3e	part_of	IBA	PANTHER:PTN000360893\|PomBase:SPBC17D11.05	150520179		GO_Central	GO_REF:0000033
EIF3A	Dog	eukaryotic translation initiation factor 3 complex, eIF3m	part_of	IEA	UniProtKB:P23116\|ensembl:ENSMUSP00000025955	150520179		Ensembl	GO_REF:0000107
EIF3A	Dog	eukaryotic translation initiation factor 3 complex, eIF3m	part_of	IBA	MGI:95301\|PANTHER:PTN000360893\|PomBase:SPBC17D11.05	150520179		GO_Central	GO_REF:0000033
EIF3A	Dog	microtubule		ISO	RGD:1307269	9068941		RGD	PMID:22613460\|REF_RGD_ID:10755442
EIF3A	Dog	multi-eIF complex	part_of	IBA	PANTHER:PTN000360893\|SGD:S000000283	150520179		GO_Central	GO_REF:0000033
EIF3A	Dog	nucleolus	located_in	IEA	UniProtKB:Q14152\|ensembl:ENSP00000358140	150520179		Ensembl	GO_REF:0000107
EIF3A	Dog	nucleoplasm	located_in	IEA	UniProtKB:Q14152\|ensembl:ENSP00000358140	150520179		Ensembl	GO_REF:0000107
EIF3A	Dog	postsynaptic density	is_active_in	IEA	UniProtKB:P23116\|ensembl:ENSMUSP00000025955	150520179		Ensembl	GO_REF:0000107

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
EIF3A	Dog	mRNA binding	enables	IBA	PANTHER:PTN000360893\|TAIR:locus:2123076	150520179		GO_Central	GO_REF:0000033
EIF3A	Dog	protein binding	enables	ISO	UniProtKB:Q04864	9068941	PMID:25416956	IntAct	PMID:25416956
EIF3A	Dog	protein binding	enables	ISO	UniProtKB:P55884	9068941	PMID:14688252, PMID:18628297, PMID:19245811	IntAct	PMID:14688252\|PMID:18628297\|PMID:19245811
EIF3A	Dog	protein binding	enables	ISO	UniProtKB:P08729\|UniProtKB:P55884	9068941	PMID:11169732	UniProt	PMID:11169732
EIF3A	Dog	protein binding	enables	ISO	UniProtKB:Q9DCH4	9068941	PMID:21124883	IntAct	PMID:21124883
EIF3A	Dog	protein binding	enables	ISO	UniProtKB:Q92900-2	9068941	PMID:18423202	IntAct	PMID:18423202
EIF3A	Dog	protein binding	enables	ISO	UniProtKB:Q8CDG1	9068941	PMID:19114715	UniProt	PMID:19114715
EIF3A	Dog	protein binding	enables	ISO	UniProtKB:P55884\|UniProtKB:P60228\|UniProtKB:Q99613	9068941	PMID:18599441	IntAct	PMID:18599441
EIF3A	Dog	protein binding	enables	ISO	UniProtKB:P41567\|UniProtKB:P47813\|UniProtKB:P60228\|UniProtKB:Q99613	9068941	PMID:23623729	IntAct	PMID:23623729
EIF3A	Dog	protein binding	enables	ISO	UniProtKB:P60228\|UniProtKB:Q99613	9068941	PMID:33961781	IntAct	PMID:33961781
EIF3A	Dog	protein binding	enables	ISO	UniProtKB:P55884\|UniProtKB:P60228	9068941	PMID:35271311	IntAct	PMID:35271311
EIF3A	Dog	protein binding	enables	ISO	UniProtKB:P60228	9068941	PMID:17468741, PMID:28514442	IntAct	PMID:17468741\|PMID:28514442
EIF3A	Dog	protein binding	enables	ISO	UniProtKB:Q9R0N3	9068941	PMID:24882364	ParkinsonsUK-UCL	PMID:24882364\|REF_RGD_ID:8693368
EIF3A	Dog	protein binding	enables	ISO	UniProtKB:Q9Q2G4	9068941	PMID:22190034	IntAct	PMID:22190034
EIF3A	Dog	receptor tyrosine kinase binding		ISO	RGD:620144	9068941		RGD	PMID:10691301\|REF_RGD_ID:10003117
EIF3A	Dog	RNA binding	enables	IEA	UniProtKB:Q14152\|ensembl:ENSP00000358140	150520179		Ensembl	GO_REF:0000107
EIF3A	Dog	RNA binding	enables	IEA	UniRule:UR000106208	150520179		UniProt	GO_REF:0000104
EIF3A	Dog	RNA binding	enables	IEA	UniProtKB-KW:KW-0694	150520179		UniProt	GO_REF:0000043
EIF3A	Dog	translation initiation factor activity	contributes_to	IEA	UniProtKB:P23116\|UniProtKB:Q14152\|ensembl:ENSMUSP00000025955\|ensembl:ENSP00000358140	150520179		Ensembl	GO_REF:0000107
EIF3A	Dog	translation initiation factor activity	contributes_to	IBA	MGI:95301\|PANTHER:PTN000360893\|UniProtKB:Q14152	150520179		GO_Central	GO_REF:0000033
EIF3A	Dog	translation initiation factor activity	enables	IEA	UniProtKB-KW:KW-0396	150520179		UniProt	GO_REF:0000043
EIF3A	Dog	translation initiation factor activity	enables	IEA	UniRule:UR000106208	150520179		UniProt	GO_REF:0000104

RGD Manual Annotations

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
EIF3A	Dog	translation initiation pathway		ISO	RGD:1316362	9068941		RGD	PMID:24499181\|REF_RGD_ID:10002776

PMID:30032202

EIF3A
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	28	29,290,668 - 29,326,851 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	28	29,291,422 - 29,326,701 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	28	29,432,879 - 29,469,314 (-)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	28	29,821,606 - 29,857,976 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	28	29,821,622 - 29,857,939 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	28	29,375,678 - 29,411,864 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	28	29,395,449 - 29,431,740 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	28	29,589,681 - 29,626,027 (-)	NCBI		UU_Cfam_GSD_1.0

EIF3A
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	10	119,033,670 - 119,080,817 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	10	119,033,670 - 119,080,817 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	10	120,793,182 - 120,840,329 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	10	120,784,531 - 120,830,324 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	10	120,784,546 - 120,830,291	NCBI
Celera	10	114,525,146 - 114,570,792 (-)	NCBI		Celera
Cytogenetic Map	10	q26.11	NCBI
HuRef	10	114,423,579 - 114,469,868 (-)	NCBI		HuRef
CHM1_1	10	121,078,880 - 121,124,758 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	10	119,929,080 - 119,976,262 (-)	NCBI		T2T-CHM13v2.0

Eif3a
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	19	60,749,554 - 60,779,131 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	19	60,749,555 - 60,779,096 (-)	Ensembl		GRCm39 Ensembl
GRCm38	19	60,761,116 - 60,790,693 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	19	60,761,117 - 60,790,658 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	19	60,837,019 - 60,866,596 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	19	60,815,785 - 60,845,306 (-)	NCBI		MGSCv36	mm8
Celera	19	62,970,389 - 62,999,944 (-)	NCBI		Celera
Cytogenetic Map	19	D3	NCBI
cM Map	19	56.52	NCBI

Eif3a
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	1	269,888,730 - 269,925,785 (-)	NCBI		GRCr8
mRatBN7.2	1	259,902,767 - 259,932,976 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	1	259,902,680 - 259,932,976 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	1	268,109,376 - 268,139,913 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	1	274,815,401 - 274,845,939 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	1	267,469,710 - 267,500,251 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	1	282,139,809 - 282,170,017 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	1	282,139,823 - 282,170,017 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	1	289,478,360 - 289,508,568 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	1	267,369,497 - 267,399,705 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	1	267,580,496 - 267,610,974 (-)	NCBI
Celera	1	255,543,560 - 255,573,769 (-)	NCBI		Celera
Cytogenetic Map	1	q55	NCBI

Eif3a
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955431	23,543,838 - 23,578,757 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955431	23,542,842 - 23,578,892 (-)	NCBI	ChiLan1.0	ChiLan1.0

EIF3A
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	8	130,896,493 - 130,943,480 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	10	130,901,834 - 130,948,616 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	10	115,608,394 - 115,654,586 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	10	119,030,884 - 119,077,603 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	10	119,033,253 - 119,072,889 (-)	Ensembl	panpan1.1		panPan2

Eif3a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024407213	17,026,204 - 17,060,008 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936486	8,499,893 - 8,534,938 (-)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936486	8,501,290 - 8,536,321 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

EIF3A
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	14	128,967,653 - 129,007,173 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	14	128,967,645 - 129,007,168 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	14	140,498,415 - 140,537,898 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

EIF3A
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	9	111,828,858 - 111,887,546 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	9	111,830,988 - 111,887,518 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666048	73,092,189 - 73,142,011 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Eif3a
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla 1.0	NW_004624737	27,691,762 - 27,733,638 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in EIF3A
463 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10


RefSeq Transcripts	XM_005637775	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038440725	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038440726	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038515325	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038515326	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038578935	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038578936	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038643145	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038643146	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_847038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000299	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000071	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000374	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000028	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000019160 ⟹ ENSCAFP00000017766

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	28	29,291,422 - 29,326,701 (-)	Ensembl

Ensembl Acc Id:

ENSCAFT00845027964 ⟹ ENSCAFP00845022013

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	28	29,821,622 - 29,857,939 (-)	Ensembl

RefSeq Acc Id:

XM_005637775 ⟹ XP_005637832

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	28	29,290,668 - 29,326,851 (-)	NCBI
Dog10K_Boxer_Tasha	28	29,432,879 - 29,469,314 (-)	NCBI

Sequence:

show sequence

TGGCTCCTTCCTTTCCGTCTCTGGCCGGCTGGGCGCGGGCGACTGCTGGCGAGGCGCGTGGAGCCTCGCGCTGGTTCCCCTTCGTCTCCCCTCCCGGCCCGGGCCACTAAGGAGTTCGCTGACGCCGG
GTGAGCCGAGCCTGCCGCCAAGATGCCGGCCTATTTCCAGAGGCCGGAAAATGCCCTCAAACGCGCCAACGAATTTCTTGAGGTTGGAAAAAAGCAGCCTGCTTTGGATGTTCTTTATGATGTTATGA
AAAGTAAGAAACACAGAACATGGCAAAAGATACATGAGCCAATTATGTTGAAATACTTGGAACTTTGCGTGGATCTTCGCAAGAGCCATTTAGCTAAAGAGGGATTATACCAGTATAAGAACATTTGT
CAACAGGTGAACATCAAATCTCTAGAAGATGTTGTTAGGGCATATTTGAAATTGGCAGAGGAAAAAACTGAGGCTGCTAAAGAGGAGTCTCAGCAGATGGTTCTAGACATAGAAGATCTGGATAATAT
TCAGACACCTGAGAGTGTTCTCCTAAGTGCTGTAAGTGGTGAAGACACTCAGGATCGTACCGACAGACTTCTTTTAACTCCATGGGTTAAATTCCTTTGGGAATCCTATAGACAGTGTTTGGACCTTC
TTCGAAACAATTCTAGAGTAGAGCGCCTCTACCATGATATTGCTCAACAAGCTTTCAAATTCTGCCTCCAGTACACTCGTAAGGCTGAATTCCGTAAGCTGTGTGACAATTTGAGAATGCACTTGTCA
CAGATTCAACGCCACCATAATCAAAGTACAGCAATCAATCTTAATAATCCAGAAAGCCAGTCCATGCATTTGGAAACCAGGCTTGTGCAGTTGGACAGTGCTATCAGTATGGAGTTATGGCAGGAAGC
ATTCAAAGCTGTGGAAGATATTCATGGACTATTCACCTTGTCTAAAAAACCACCTAAACCTCAGTTGATGGCAAATTACTATAATAAAGTCTCAACTGTGTTTTGGAAATCTGGAAATGCTCTTTTTC
ATGCATCTACACTCCATCGTCTTTACCATCTATCCAGAGAAATGAGAAAGAATCTTACACAAGAAGAGATGCAAAGAATGTCTACCAGAGTCCTTTTGGCCACTCTTTCCATCCCTATTACCCCTGAG
CGTACTGATATTGCTCGACTTTTGGATATGGATGGCATTATAGTAGAAAAACAACGTCGCCTTGCAACATTGCTCGGTCTTCAAGCCCCACCAACACGAATTGGCCTTATAAACGATATGGTCAGATT
CAACGTACTGCAGTATGTTGTCCCTGAAGTGAAAGACCTTTACAATTGGCTGGAAGTAGAATTTAACCCACTAAAACTCTGTGAGAGAGTCACAAAGGTTCTAAATTGGGTTAGGGAACAACCCGAAA
AGGAACCAGAGTTGCAACAGTATGTTCCACAGCTGCAAAACAATACCATACTCCGTCTTCTGCAGCAGGTGGCACAAATTTATCAGAGCATTGAATTTTCTCGTTTGACTTCTCTGGTTCCTTTTGTT
GATGCTTTCCAACTGGAACGGGCTATAGTCGATGCAGCCAGGCATTGTGACCTGCAGGTTCGTATTGACCACACTTCTCGGACCCTTAGTTTTGGATCTGATTTGAATTATGCTACTCGAGAAGATGC
TCCAATTGGTCCTCATTTGCAAAGCATGCCTTCGGAACAGATAAGAAATCAGCTAACAGCAATGTCCTCAGTACTTGCAAAGGCGCTTGAAGTCATTAAGCCAGCTCATATACTGCAAGAGAAAGAAG
AACAGCATCAGTTGGCTGTTACTGCGTACCTTAAAAATTCACGAAAAGAGCATCAGCGTATCCTGGCTCGCCGTCAGACAATTGAGGAAAGAAAAGAGCGCCTTGAAAGTCTGAATATTCAGCGTGAG
AAGGAAGAACTGGAGCAGAGGGAAGCTGAGCTCCAGAAAGTACGGAAAGCTGAAGAAGAGAGGCTGCGACAGGAGGCAAAGGAGAGGGAGAAAGAGCGCATCTTACAGGAACATGAACAAATCAAAAA
GAAAACTGTTCGTGAGCGTTTGGAGCAGATCAAGAAAACAGAACTGGGTGCCAAAGCATTCAAAGATATTGACATTGAAGATCTTGAAGAATTGGATCCAGATTTCATCATGGCTAAACAGGTTGAAC
AGCTGGAGAAAGAAAAGAAGGAACTTCAGGAGCGCCTGAAGAATCAAGAAAAGAAGATTGACTATTTTGAAAGAGCTAAACGCTTGGAGGAAATCCCATTGATAAAGAGTGCTTATGAAGAACAGAGG
ATTAAAGACATGGATCTGTGGGAACAACAGGAAGAAGAAAGAATTACCACCATGCAACTAGAACGTGAAAAGGCTCTTGAACATAAGAATCGAATGTCACGGATGCTTGAAGACAGAGATTTATTTGT
GATGCGACTCAAGGCTGCACGACAGTCTGTTTATGAGGAAAAACTTAAACAGTTTGAGGAACGATTAGCAGAAGAAAGGCATAATCGCTTGGAAGAACGTAAAAGGCAACGTAAAGAAGAGCGCAGAA
TAACCTACCACAGAGAAAAAGAAGAGGAGGAACAGAGGAGGGCAGAAGAACAAATGCTAAAAGAGCGTGAAGAGAGAGAGCGTGCTGAACGGGCAAAACGTGAGGAAGAGCTACGAGAGTATCAGGAG
CGAGTCAAGAAATTAGAAGAAGTAGAAAGGAAAAAACGCCAAAGAGAGCTGGAAATTGAAGAAAGGGAACGACGTAGAGAGGAAGAGAGAAGACTTGGTGATGATCCACTTTCTAGAAAGGACTCTCG
TTGGGGAGATAGAGATTCAGAAGGCACATGGAGAAAAGGACCTGAAGTAGATTCCGAGTGGAGAAGAGGCCCACCAGAGAAGGAGTGGAGACGTGGAGAGGGGCGGGATGAGGAGAGGCCTCATAGAA
GAGAAGAAGATCGACCAAGGCGCTTGGGGGATGAGGAAGAAAGAGAGTCTTCTCTTAGACCAGATGACGATCGCATTCCCCGGCGTGGCATGGATGATGACAGAGGTCCTAGACGTGGTCTTGATGAA
GACCGGTTCTCTCGCCGTGGGGCAGACGATGACCGGCCTTCCTGGCGCAATGCAGATGATGATAGACCTCCCAGACGAATTGGTGATGAAGATAGGGGGAGCTGGCGTCATGCGGATGATGATAGACC
ACCTAGACGAGGACTGGATGAGGACAGAGGACCAAGACGTGGGATGGATGAGGACCGGGGGCCACGGCGAGGAGGTGCAGATGACGAGCGATCTTCCTGGCGTAATGCTGATGACGATCGGGGTCCCA
GGCGGGGCATGGATGATGACCGGGGTCCCAGGCGTGGGCTGGATGATGATCGAGGACCTTGGAGGAGTACTGATGATGACAGAATTTCCAGGCGCGGTGCAGATGATGACCGGGGGCCTTGGAGAAAC
ATGGATGATGATCGGATTCCCAGAAGGGGCGATGACTCAAGACCTGGTCCCTGGAGACCATTTGTCAAGCCAGGTGGATGGAGAGAGAAAGAAAAGGCCAGAGAAGAGAGTTGGGGTCCACCTCGAGA
ATCGAGACCATCAGAAGAACGTGAATGGGATAGGGAAAAAGAGAGAGAGAGAGAGAGAGAGAACCAAGATCGTGATGAAAATGACAAGGACCCAGAGAAAGAAAGAGACCGAGAGAGAGAGCGAGAGC
GGGACAGAGAACGAGATGGGGATCGAGAGGACCGCTTCAGACGACCTAGGGATGAAGGAGGGTGGAGAAGAGGACCAGCGGAAGAATCTTCGAGCTGGAGAGATTCAAATCGCCGTGAAGATAGGGAT
CGGGATGACCGTCGTCGGGAGAGAGATGATCGCCGTGATCTAAGGGAAAGGCGAGATGACAGAGACCGAAGAGGACCTCCTCTCCGATCAGAACGTGAAGAAGTAAGTTCTTGGAGACGTGCTGATGA
CAGGAAAGATGAGCGGGCCGAAGAGCGGGAAGCCCCTCGTCGTGTTCCTCCCCCTGCTCTTTCAAGAGACCGAGAAAGAGACCGAGACAGGGAAAGAGAAGGTGAAAAAGAGAAAGCCTCATGGAGAG
CTGAGAAAGATAGGGAATCTCTTCGTCGTACTAAAAATGAGACTGATGAAGATGGATGGACCACGGTACGACGTTAAATCTCAAGATAATGGATTCAGACTTATGTCTCATATGTTTGATCACATTCA
AGGATTATTATACTTGTGCTTCAACCAGTCTAAATTGGATTCTTTAATGTTGTCTCACCATAACACAAAAAGCATGAACTTGTATTAATCCTCTATAATAGATTGATCGTGCACCGTGTCCACAGGAG
GTTGGACTGCCAGGCCATTTTCTGGAATTTAAGGTGTTGCATTATTTCATCAATCATTTGTTTACAAAAAAGAAAAACTAAAAAATAAATTTAAAATGTGAACCCGTCAGGTATGGAGTAACACCTGT
ATCTTGGTATAGAACTGATCTTTTTCTTTTGTTTTTGAAATACTATATTAATTTGGAATGAGGTATGATTCTGTTAAAGAAAATGTATTTGAAGACTCTTCAAAGCAGGGGCTGAAACGACTTCCACA
CCATTAGCGGTTGAGACATACCTCTAGATATTTTGAGGTATTTACTATATTAACTACATTTAGAAAGTTTTTAGGTTCGCTATAAGTGCAGTAAACATTAAGGACATTGGATACAGTGGGATTTTCTG
TAGATTTTACTTGAGAGGTGAGTATAAAGCAATTTGCAGTCACTGAAATGACAAGAATACTGCTCAAGTGTGAATCCAAAACAATTAAAGCTTTTAAATTTTAAAGCATTTGGTAAAACTGTTGCTGA
GTTTTTTCTGTTGCCAATAGCAAACTGCTTTTCCATTAATGGAGAATTCATGCCTTTCAAGCATTTTAAATATGACAATATTTATAAATGTGTGGTTTGGAGGAATTGTTTAAATTCTTTTTCCTAAT
TTCCTTTCTCTTCAGGATAGATTCTTTCAACAAGTAATTTGTAGTAATGACTGTGTTGACTTCAATTTTGGAATGTCGTAGCTATGTCAGAGATTAACTAATTTGGTCTTATTGAAGCCAACACAGAA
CTTGCTGCTGTGTTTTTTCTTCAGTGATAAATAAAATACTTACAGAATTTG

hide sequence

RefSeq Acc Id:

XM_038440725 ⟹ XP_038296653

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	28	29,821,606 - 29,857,976 (-)	NCBI

RefSeq Acc Id:

XM_038440726 ⟹ XP_038296654

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	28	29,821,606 - 29,857,976 (-)	NCBI

RefSeq Acc Id:

XM_038515325 ⟹ XP_038371253

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	28	29,375,678 - 29,411,864 (-)	NCBI

RefSeq Acc Id:

XM_038515326 ⟹ XP_038371254

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	28	29,375,678 - 29,411,864 (-)	NCBI

RefSeq Acc Id:

XM_038578935 ⟹ XP_038434863

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	28	29,589,681 - 29,626,027 (-)	NCBI

RefSeq Acc Id:

XM_038578936 ⟹ XP_038434864

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	28	29,589,681 - 29,626,027 (-)	NCBI

RefSeq Acc Id:

XM_038643145 ⟹ XP_038499073

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	28	29,395,449 - 29,431,740 (-)	NCBI

RefSeq Acc Id:

XM_038643146 ⟹ XP_038499074

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	28	29,395,449 - 29,431,740 (-)	NCBI

RefSeq Acc Id:

XM_847038 ⟹ XP_852131

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	28	29,290,668 - 29,326,851 (-)	NCBI
Dog10K_Boxer_Tasha	28	29,432,879 - 29,469,314 (-)	NCBI

Sequence:

show sequence

TGGCTCCTTCCTTTCCGTCTCTGGCCGGCTGGGCGCGGGCGACTGCTGGCGAGGCGCGTGGAGC
CTCGCGCTGGTTCCCCTTCGTCTCCCCTCCCGGCCCGGGCCACTAAGGAGTTCGCTGACGCCGGGTGAGCCGAGCCTGCCGCCAAGATGCCGGCCTATTTCCAGAGGCCGGAAAATGCCCTCAAACGC
GCCAACGAATTTCTTGAGGTTGGAAAAAAGCAGCCTGCTTTGGATGTTCTTTATGATGTTATGAAAAGTAAGAAACACAGAACATGGCAAAAGATACATGAGCCAATTATGTTGAAATACTTGGAACT
TTGCGTGGATCTTCGCAAGAGCCATTTAGCTAAAGAGGGATTATACCAGTATAAGAACATTTGTCAACAGGTGAACATCAAATCTCTAGAAGATGTTGTTAGGGCATATTTGAAATTGGCAGAGGAAA
AAACTGAGGCTGCTAAAGAGGAGTCTCAGCAGATGGTTCTAGACATAGAAGATCTGGATAATATTCAGACACCTGAGAGTGTTCTCCTAAGTGCTGTAAGTGGTGAAGACACTCAGGATCGTACCGAC
AGACTTCTTTTAACTCCATGGGTTAAATTCCTTTGGGAATCCTATAGACAGTGTTTGGACCTTCTTCGAAACAATTCTAGAGTAGAGCGCCTCTACCATGATATTGCTCAACAAGCTTTCAAATTCTG
CCTCCAGTACACTCGTAAGGCTGAATTCCGTAAGCTGTGTGACAATTTGAGAATGCACTTGTCACAGATTCAACGCCACCATAATCAAAGTACAGCAATCAATCTTAATAATCCAGAAAGCCAGTCCA
TGCATTTGGAAACCAGGCTTGTGCAGTTGGACAGTGCTATCAGTATGGAGTTATGGCAGGAAGCATTCAAAGCTGTGGAAGATATTCATGGACTATTCACCTTGTCTAAAAAACCACCTAAACCTCAG
TTGATGGCAAATTACTATAATAAAGTCTCAACTGTGTTTTGGAAATCTGGAAATGCTCTTTTTCATGCATCTACACTCCATCGTCTTTACCATCTATCCAGAGAAATGAGAAAGAATCTTACACAAGA
AGAGATGCAAAGAATGTCTACCAGAGTCCTTTTGGCCACTCTTTCCATCCCTATTACCCCTGAGCGTACTGATATTGCTCGACTTTTGGATATGGATGGCATTATAGTAGAAAAACAACGTCGCCTTG
CAACATTGCTCGGTCTTCAAGCCCCACCAACACGAATTGGCCTTATAAACGATATGGTCAGATTCAACGTACTGCAGTATGTTGTCCCTGAAGTGAAAGACCTTTACAATTGGCTGGAAGTAGAATTT
AACCCACTAAAACTCTGTGAGAGAGTCACAAAGGTTCTAAATTGGGTTAGGGAACAACCCGAAAAGGAACCAGAGTTGCAACAGTATGTTCCACAGCTGCAAAACAATACCATACTCCGTCTTCTGCA
GCAGGTGGCACAAATTTATCAGAGCATTGAATTTTCTCGTTTGACTTCTCTGGTTCCTTTTGTTGATGCTTTCCAACTGGAACGGGCTATAGTCGATGCAGCCAGGCATTGTGACCTGCAGGTTCGTA
TTGACCACACTTCTCGGACCCTTAGTTTTGGATCTGATTTGAATTATGCTACTCGAGAAGATGCTCCAATTGGTCCTCATTTGCAAAGCATGCCTTCGGAACAGATAAGAAATCAGCTAACAGCAATG
TCCTCAGTACTTGCAAAGGCGCTTGAAGTCATTAAGCCAGCTCATATACTGCAAGAGAAAGAAGAACAGCATCAGTTGGCTGTTACTGCGTACCTTAAAAATTCACGAAAAGAGCATCAGCGTATCCT
GGCTCGCCGTCAGACAATTGAGGAAAGAAAAGAGCGCCTTGAAAGTCTGAATATTCAGCGTGAGAAGGAAGAACTGGAGCAGAGGGAAGCTGAGCTCCAGAAAGTACGGAAAGCTGAAGAAGAGAGGC
TGCGACAGGAGGCAAAGGAGAGGGAGAAAGAGCGCATCTTACAGGAACATGAACAAATCAAAAAGAAAACTGTTCGTGAGCGTTTGGAGCAGATCAAGAAAACAGAACTGGGTGCCAAAGCATTCAAA
GATATTGACATTGAAGATCTTGAAGAATTGGATCCAGATTTCATCATGGCTAAACAGGTTGAACAGCTGGAGAAAGAAAAGAAGGAACTTCAGGAGCGCCTGAAGAATCAAGAAAAGAAGATTGACTA
TTTTGAAAGAGCTAAACGCTTGGAGGAAATCCCATTGATAAAGAGTGCTTATGAAGAACAGAGGATTAAAGACATGGATCTGTGGGAACAACAGGAAGAAGAAAGAATTACCACCATGCAACTAGAAC
GTGAAAAGGCTCTTGAACATAAGAATCGAATGTCACGGATGCTTGAAGACAGAGATTTATTTGTGATGCGACTCAAGGCTGCACGACAGTCTGTTTATGAGGAAAAACTTAAACAGTTTGAGGAACGA
TTAGCAGAAGAAAGGCATAATCGCTTGGAAGAACGTAAAAGGCAACGTAAAGAAGAGCGCAGAATAACCTACCACAGAGAAAAAGAAGAGGAGGAACAGAGGAGGGCAGAAGAACAAATGCTAAAAGA
GCGTGAAGAGAGAGAGCGTGCTGAACGGGCAAAACGTGAGGAAGAGCTACGAGAGTATCAGGAGCGAGTCAAGAAATTAGAAGAAGTAGAAAGGAAAAAACGCCAAAGAGAGCTGGAAATTGAAGAAA
GGGAACGACGTAGAGAGGAAGAGAGAAGACTTGGTGATGATCCACTTTCTAGAAAGGACTCTCGTTGGGGAGATAGAGATTCAGAAGGCACATGGAGAAAAGGACCTGAAGTAGATTCCGAGTGGAGA
AGAGGCCCACCAGAGAAGGAGTGGAGACGTGGAGAGGGGCGGGATGAGGAGAGGCCTCATAGAAGAGAAGAAGATCGACCAAGGCGCTTGGGGGATGAGGAAGAAAGAGAGTCTTCTCTTAGACCAGA
TGACGATCGCATTCCCCGGCGTGGCATGGATGATGACAGAGGTCCTAGACGTGGTCTTGATGAAGACCGGTTCTCTCGCCGTGGGGCAGACGATGACCGGCCTTCCTGGCGCAATGCAGATGATGATA
GACCTCCCAGACGAATTGGTGATGAAGATAGGGGGAGCTGGCGTCATGCGGATGATGATAGACCACCTAGACGAGGACTGGATGAGGACAGAGGAAGCTGGCGAACAGCTGATGAGGACAGAGGACCA
AGACGTGGGATGGATGAGGACCGGGGGCCACGGCGAGGAGGTGCAGATGACGAGCGATCTTCCTGGCGTAATGCTGATGACGATCGGGGTCCCAGGCGGGGCATGGATGATGACCGGGGTCCCAGGCG
TGGGCTGGATGATGATCGAGGACCTTGGAGGAGTACTGATGATGACAGAATTTCCAGGCGCGGTGCAGATGATGACCGGGGGCCTTGGAGAAACATGGATGATGATCGGATTCCCAGAAGGGGCGATG
ACTCAAGACCTGGTCCCTGGAGACCATTTGTCAAGCCAGGTGGATGGAGAGAGAAAGAAAAGGCCAGAGAAGAGAGTTGGGGTCCACCTCGAGAATCGAGACCATCAGAAGAACGTGAATGGGATAGG
GAAAAAGAGAGAGAGAGAGAGAGAGAGAACCAAGATCGTGATGAAAATGACAAGGACCCAGAGAAAGAAAGAGACCGAGAGAGAGAGCGAGAGCGGGACAGAGAACGAGATGGGGATCGAGAGGACCG
CTTCAGACGACCTAGGGATGAAGGAGGGTGGAGAAGAGGACCAGCGGAAGAATCTTCGAGCTGGAGAGATTCAAATCGCCGTGAAGATAGGGATCGGGATGACCGTCGTCGGGAGAGAGATGATCGCC
GTGATCTAAGGGAAAGGCGAGATGACAGAGACCGAAGAGGACCTCCTCTCCGATCAGAACGTGAAGAAGTAAGTTCTTGGAGACGTGCTGATGACAGGAAAGATGAGCGGGCCGAAGAGCGGGAAGCC
CCTCGTCGTGTTCCTCCCCCTGCTCTTTCAAGAGACCGAGAAAGAGACCGAGACAGGGAAAGAGAAGGTGAAAAAGAGAAAGCCTCATGGAGAGCTGAGAAAGATAGGGAATCTCTTCGTCGTACTAA
AAATGAGACTGATGAAGATGGATGGACCACGGTACGACGTTAAATCTCAAGATAATGGATTCAGACTTATGTCTCATATGTTTGATCACATTCAAGGATTATTATACTTGTGCTTCAACCAGTCTAAA
TTGGATTCTTTAATGTTGTCTCACCATAACACAAAAAGCATGAACTTGTATTAATCCTCTATAATAGATTGATCGTGCACCGTGTCCACAGGAGGTTGGACTGCCAGGCCATTTTCTGGAATTTAAGG
TGTTGCATTATTTCATCAATCATTTGTTTACAAAAAAGAAAAACTAAAAAATAAATTTAAAATGTGAACCCGTCAGGTATGGAGTAACACCTGTATCTTGGTATAGAACTGATCTTTTTCTTTTGTTT
TTGAAATACTATATTAATTTGGAATGAGGTATGATTCTGTTAAAGAAAATGTATTTGAAGACTCTTCAAAGCAGGGGCTGAAACGACTTCCACACCATTAGCGGTTGAGACATACCTCTAGATATTTT
GAGGTATTTACTATATTAACTACATTTAGAAAGTTTTTAGGTTCGCTATAAGTGCAGTAAACATTAAGGACATTGGATACAGTGGGATTTTCTGTAGATTTTACTTGAGAGGTGAGTATAAAGCAATT
TGCAGTCACTGAAATGACAAGAATACTGCTCAAGTGTGAATCCAAAACAATTAAAGCTTTTAAATTTTAAAGCATTTGGTAAAACTGTTGCTGAGTTTTTTCTGTTGCCAATAGCAAACTGCTTTTCC
ATTAATGGAGAATTCATGCCTTTCAAGCATTTTAAATATGACAATATTTATAAATGTGTGGTTTGGAGGAATTGTTTAAATTCTTTTTCCTAATTTCCTTTCTCTTCAGGATAGATTCTTTCAACAAG
TAATTTGTAGTAATGACTGTGTTGACTTCAATTTTGGAATGTCGTAGCTATGTCAGAGATTAACTAATTTGGTCTTATTGAAGCCAACACAGAACTTGCTGCTGTGTTTTTTCTTCAGTGATAAATAA
AATACTTACAGAATTTG

hide sequence


Protein RefSeqs	XP_005637832	(Get FASTA)	NCBI Sequence Viewer
	XP_038296653	(Get FASTA)	NCBI Sequence Viewer
	XP_038296654	(Get FASTA)	NCBI Sequence Viewer
	XP_038371253	(Get FASTA)	NCBI Sequence Viewer
	XP_038371254	(Get FASTA)	NCBI Sequence Viewer
	XP_038434863	(Get FASTA)	NCBI Sequence Viewer
	XP_038434864	(Get FASTA)	NCBI Sequence Viewer
	XP_038499073	(Get FASTA)	NCBI Sequence Viewer
	XP_038499074	(Get FASTA)	NCBI Sequence Viewer
	XP_852131	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000017766.4
	ENSCAFP00030039302.1
	ENSCAFP00040041296.1
	ENSCAFP00845022013
	ENSCAFP00845022013.1

RefSeq Acc Id:

XP_005637832 ⟸ XM_005637775

- Peptide Label:

isoform X2

- Sequence:

show sequence

MPAYFQRPENALKRANEFLEVGKKQPALDVLYDVMKSKKHRTWQKIHEPIMLKYLELCVDLRKSHLAKEGLYQYKNICQQVNIKSLEDVVRAYLKLAEEKTEAAKEESQQMVLDIEDLDNIQTPESVL
LSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERLYHDIAQQAFKFCLQYTRKAEFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLETRLVQLDSAISMELWQEAFKAVEDI
HGLFTLSKKPPKPQLMANYYNKVSTVFWKSGNALFHASTLHRLYHLSREMRKNLTQEEMQRMSTRVLLATLSIPITPERTDIARLLDMDGIIVEKQRRLATLLGLQAPPTRIGLINDMVRFNVLQYVV
PEVKDLYNWLEVEFNPLKLCERVTKVLNWVREQPEKEPELQQYVPQLQNNTILRLLQQVAQIYQSIEFSRLTSLVPFVDAFQLERAIVDAARHCDLQVRIDHTSRTLSFGSDLNYATREDAPIGPHLQ
SMPSEQIRNQLTAMSSVLAKALEVIKPAHILQEKEEQHQLAVTAYLKNSRKEHQRILARRQTIEERKERLESLNIQREKEELEQREAELQKVRKAEEERLRQEAKEREKERILQEHEQIKKKTVRERL
EQIKKTELGAKAFKDIDIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFERAKRLEEIPLIKSAYEEQRIKDMDLWEQQEEERITTMQLEREKALEHKNRMSRMLEDRDLFVMRLKAAR
QSVYEEKLKQFEERLAEERHNRLEERKRQRKEERRITYHREKEEEEQRRAEEQMLKEREERERAERAKREEELREYQERVKKLEEVERKKRQRELEIEERERRREEERRLGDDPLSRKDSRWGDRDSE
GTWRKGPEVDSEWRRGPPEKEWRRGEGRDEERPHRREEDRPRRLGDEEERESSLRPDDDRIPRRGMDDDRGPRRGLDEDRFSRRGADDDRPSWRNADDDRPPRRIGDEDRGSWRHADDDRPPRRGLDE
DRGPRRGMDEDRGPRRGGADDERSSWRNADDDRGPRRGMDDDRGPRRGLDDDRGPWRSTDDDRISRRGADDDRGPWRNMDDDRIPRRGDDSRPGPWRPFVKPGGWREKEKAREESWGPPRESRPSEER
EWDREKERERERENQDRDENDKDPEKERDRERERERDRERDGDREDRFRRPRDEGGWRRGPAEESSSWRDSNRREDRDRDDRRRERDDRRDLRERRDDRDRRGPPLRSEREEVSSWRRADDRKDERAE
EREAPRRVPPPALSRDRERDRDREREGEKEKASWRAEKDRESLRRTKNETDEDGWTTVRR

hide sequence

RefSeq Acc Id:	XP_852131 ⟸ XM_847038
- Peptide Label:	isoform X1
- UniProtKB:	A0A8C0KMV2 (UniProtKB/TrEMBL), A0A8C0Z702 (UniProtKB/TrEMBL), A0A8P0SGW8 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPAYFQRPENALKRANEFLEVGKKQPALDVLYDVMKSKKHRTWQKIHEPIMLKYLELCVDLRKS HLAKEGLYQYKNICQQVNIKSLEDVVRAYLKLAEEKTEAAKEESQQMVLDIEDLDNIQTPESVLLSAVSGEDTQDRTDRLLLTPWVKFLWESYRQCLDLLRNNSRVERLYHDIAQQAFKFCLQYTRKA EFRKLCDNLRMHLSQIQRHHNQSTAINLNNPESQSMHLETRLVQLDSAISMELWQEAFKAVEDIHGLFTLSKKPPKPQLMANYYNKVSTVFWKSGNALFHASTLHRLYHLSREMRKNLTQEEMQRMST RVLLATLSIPITPERTDIARLLDMDGIIVEKQRRLATLLGLQAPPTRIGLINDMVRFNVLQYVVPEVKDLYNWLEVEFNPLKLCERVTKVLNWVREQPEKEPELQQYVPQLQNNTILRLLQQVAQIYQ SIEFSRLTSLVPFVDAFQLERAIVDAARHCDLQVRIDHTSRTLSFGSDLNYATREDAPIGPHLQSMPSEQIRNQLTAMSSVLAKALEVIKPAHILQEKEEQHQLAVTAYLKNSRKEHQRILARRQTIE ERKERLESLNIQREKEELEQREAELQKVRKAEEERLRQEAKEREKERILQEHEQIKKKTVRERLEQIKKTELGAKAFKDIDIEDLEELDPDFIMAKQVEQLEKEKKELQERLKNQEKKIDYFERAKRL EEIPLIKSAYEEQRIKDMDLWEQQEEERITTMQLEREKALEHKNRMSRMLEDRDLFVMRLKAARQSVYEEKLKQFEERLAEERHNRLEERKRQRKEERRITYHREKEEEEQRRAEEQMLKEREERERA ERAKREEELREYQERVKKLEEVERKKRQRELEIEERERRREEERRLGDDPLSRKDSRWGDRDSEGTWRKGPEVDSEWRRGPPEKEWRRGEGRDEERPHRREEDRPRRLGDEEERESSLRPDDDRIPRR GMDDDRGPRRGLDEDRFSRRGADDDRPSWRNADDDRPPRRIGDEDRGSWRHADDDRPPRRGLDEDRGSWRTADEDRGPRRGMDEDRGPRRGGADDERSSWRNADDDRGPRRGMDDDRGPRRGLDDDRG PWRSTDDDRISRRGADDDRGPWRNMDDDRIPRRGDDSRPGPWRPFVKPGGWREKEKAREESWGPPRESRPSEEREWDREKERERERENQDRDENDKDPEKERDRERERERDRERDGDREDRFRRPRDE GGWRRGPAEESSSWRDSNRREDRDRDDRRRERDDRRDLRERRDDRDRRGPPLRSEREEVSSWRRADDRKDERAEEREAPRRVPPPALSRDRERDRDREREGEKEKASWRAEKDRESLRRTKNETDEDG WTTVRR hide sequence

Ensembl Acc Id:

ENSCAFP00000017766 ⟸ ENSCAFT00000019160

RefSeq Acc Id:	XP_038371254 ⟸ XM_038515326
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038371253 ⟸ XM_038515325
- Peptide Label:	isoform X1

Protein Domains

PCI

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000012057	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030024419	UniProtKB/TrEMBL
	ENSCAFG00040025356	UniProtKB/TrEMBL
	ENSCAFG00845015674	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000019160.6	UniProtKB/TrEMBL
	ENSCAFT00030045012.1	UniProtKB/TrEMBL
	ENSCAFT00040047300.1	UniProtKB/TrEMBL
	ENSCAFT00845027964	ENTREZGENE
	ENSCAFT00845027964.1	UniProtKB/TrEMBL
Gene3D-CATH	1.25.40.860	UniProtKB/TrEMBL
	UVR domain	UniProtKB/TrEMBL
InterPro	EIF3A	UniProtKB/TrEMBL
	eIF3a_PCI_TPR-like	UniProtKB/TrEMBL
	PCI_dom	UniProtKB/TrEMBL
NCBI Gene	EIF3A	ENTREZGENE
PANTHER	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT A	UniProtKB/TrEMBL
	PTHR14005	UniProtKB/TrEMBL
Pfam	eIF3a_PCI_TPR-like	UniProtKB/TrEMBL
	PCI	UniProtKB/TrEMBL
PROSITE	PCI	UniProtKB/TrEMBL
SMART	PINT	UniProtKB/TrEMBL
UniProt	A0A8C0KMV2	ENTREZGENE
	A0A8C0RSM9	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0Z702	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3NXD1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0SGW8	ENTREZGENE
UniProt Secondary	A0A8P0SGW8	UniProtKB/TrEMBL
VGNC ID	VGNC:40268	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
		Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

Send us a Message

Imported Disease Annotations - CTD

RGD Manual Annotations