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Gene: SPATA17 (spermatogenesis associated 17) Canis lupus familiaris

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Symbol:

SPATA17

Name:

spermatogenesis associated 17

RGD ID:

12062102

Description:

ENCODES a protein that exhibits calmodulin binding (inferred); ASSOCIATED WITH gastrointestinal stromal tumor (ortholog); Loeys-Dietz syndrome 4 (ortholog); parathyroid carcinoma (ortholog); FOUND IN cytoplasm (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

spermatogenesis-associated protein 17

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	38	12,850,773 - 13,058,137 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	38	12,850,469 - 13,146,096 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	38	12,893,459 - 13,100,316 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	38	12,883,600 - 13,091,323 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	38	12,883,299 - 13,055,928 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	38	12,893,896 - 13,101,103 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	38	13,240,510 - 13,447,681 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	38	13,549,364 - 13,757,219 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
SPATA17	Dog	gastrointestinal stromal tumor		ISO	RGD:1604999	8554872	ClinVar Annotator: match by term: Gastrointestinal stromal tumor	ClinVar	PMID:28492532
SPATA17	Dog	Loeys-Dietz syndrome 4		ISO	RGD:1604999	8554872	ClinVar Annotator: match by term: Loeys-Dietz syndrome 4	ClinVar	PMID:22772368\|PMID:28544325
SPATA17	Dog	parathyroid carcinoma		ISO	RGD:1604999	8554872	ClinVar Annotator: match by term: Parathyroid carcinoma	ClinVar	PMID:28492532
SPATA17	Dog	Usher syndrome		ISO	RGD:1604999	8554872	ClinVar Annotator: match by term: Usher syndrome	ClinVar	PMID:28041643

Cellular Component

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
SPATA17	Dog	cytoplasm	located_in	IEA	UniProtKB-SubCell:SL-0086	150520179		UniProt	GO_REF:0000044

Molecular Function

Only show annotations with direct experimental evidence (0 objects hidden)

Object Symbol	Species	Term	Qualifier	Evidence	With	Reference	Notes	Source	Original Reference(s)
SPATA17	Dog	calmodulin binding	enables	IEA	UniProtKB-KW:KW-0112	150520179		UniProt	GO_REF:0000043
SPATA17	Dog	protein binding	enables	ISO	UniProtKB:Q8NB78	9068941	PMID:28514442, PMID:33961781	IntAct	PMID:28514442\|PMID:33961781
SPATA17	Dog	protein binding	enables	ISO	UniProtKB:P27797\|UniProtKB:P36957\|UniProtKB:Q8N131\|UniProtKB:Q8TDX7	9068941	PMID:32814053	IntAct	PMID:32814053

PMID:22301074	PMID:30032202

SPATA17
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	38	12,850,773 - 13,058,137 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	38	12,850,469 - 13,146,096 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	38	12,893,459 - 13,100,316 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	38	12,883,600 - 13,091,323 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	38	12,883,299 - 13,055,928 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	38	12,893,896 - 13,101,103 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	38	13,240,510 - 13,447,681 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	38	13,549,364 - 13,757,219 (+)	NCBI		UU_Cfam_GSD_1.0

SPATA17
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	1	217,631,344 - 217,871,696 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	1	217,631,324 - 217,871,696 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	1	217,804,686 - 218,045,038 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	1	215,871,318 - 216,107,107 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	1	191,028,161 - 191,263,954 (+)	NCBI		Celera
Cytogenetic Map	1	q41	NCBI
HuRef	1	188,479,192 - 188,715,920 (+)	NCBI		HuRef
CHM1_1	1	219,077,463 - 219,313,195 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	1	216,872,358 - 217,112,494 (+)	NCBI		T2T-CHM13v2.0

Spata17
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	1	186,741,811 - 186,947,705 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	1	186,776,845 - 186,947,662 (-)	Ensembl		GRCm39 Ensembl
GRCm38	1	187,009,614 - 187,215,511 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	1	187,044,648 - 187,215,465 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	1	188,872,286 - 189,039,325 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	1	188,749,194 - 188,916,253 (-)	NCBI		MGSCv36	mm8
Celera	1	193,981,524 - 194,141,934 (-)	NCBI		Celera
Cytogenetic Map	1	H5	NCBI
cM Map	1	90.23	NCBI

Spata17
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	13	101,137,415 - 101,316,221 (-)	NCBI		GRCr8
mRatBN7.2	13	98,605,986 - 98,784,855 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	13	98,605,986 - 98,784,929 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	13	101,121,463 - 101,300,415 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	13	102,510,639 - 102,689,336 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	13	99,707,437 - 99,886,371 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	13	105,489,121 - 105,684,293 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	13	105,489,074 - 105,684,374 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	13	110,139,348 - 110,334,033 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	13	103,171,233 - 103,353,833 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
Celera	13	98,106,089 - 98,283,909 (-)	NCBI		Celera
Cytogenetic Map	13	q26	NCBI

Spata17
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955406	616,018 - 800,383 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955406	599,438 - 800,369 (-)	NCBI	ChiLan1.0	ChiLan1.0

SPATA17
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	1	31,531,425 - 31,762,905 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	1	31,493,977 - 31,725,490 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	1	193,205,670 - 193,437,171 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	1	198,059,692 - 198,285,900 (+)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	1	198,059,692 - 198,287,313 (+)	Ensembl	panpan1.1		panPan2

Spata17
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409344	58,799,654 - 58,995,960 (-)	NCBI		HiC_Itri_2
SpeTri2.0	NW_004936628	813,437 - 1,006,000 (-)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

SPATA17
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	10	7,797,502 - 7,971,824 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	10	7,797,448 - 8,120,892 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	10	9,884,741 - 10,017,266 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

SPATA17
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	25	11,729,382 - 11,956,102 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	25	11,728,433 - 11,955,926 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666055	12,139,439 - 12,375,225 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Spata17
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624835	1,796,302 - 1,982,664 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624835	1,796,181 - 1,979,668 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants in SPATA17
2776 total Variants

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10


RefSeq Transcripts	XM_005640822	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005640823	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022415378	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022415379	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038448446	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038448447	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038448449	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522354	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522355	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038522356	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038586158	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038586159	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038586160	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038650561	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038650562	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038650563	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000362	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000087	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000370	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000038	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000017171 ⟹ ENSCAFP00000015890

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	38	12,850,469 - 13,085,947 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000066401 ⟹ ENSCAFP00000056093

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	38	12,850,469 - 13,037,825 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000075427 ⟹ ENSCAFP00000057081

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	38	12,850,469 - 13,146,096 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000076390 ⟹ ENSCAFP00000052910

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	38	12,850,469 - 13,021,069 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000079555 ⟹ ENSCAFP00000051128

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	38	12,850,469 - 13,146,096 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000083323 ⟹ ENSCAFP00000049853

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	38	12,850,469 - 13,021,019 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000090824 ⟹ ENSCAFP00000059037

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	38	12,850,469 - 13,146,096 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000090877 ⟹ ENSCAFP00000050043

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	38	12,850,469 - 13,037,825 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845049286 ⟹ ENSCAFP00845038679

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	38	12,883,299 - 13,055,928 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845049356 ⟹ ENSCAFP00845038727

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	38	12,883,299 - 13,055,928 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845049440 ⟹ ENSCAFP00845038791

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	38	12,883,299 - 13,054,275 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845049492 ⟹ ENSCAFP00845038829

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	38	12,883,688 - 13,055,928 (+)	Ensembl

RefSeq Acc Id:

XM_005640822 ⟹ XP_005640879

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	38	12,850,773 - 13,058,137 (+)	NCBI
Dog10K_Boxer_Tasha	38	12,893,459 - 13,100,316 (+)	NCBI

Sequence:

show sequence

CCCCCCCCCGGGACGAGGTTTGTGGTTCAGTCCGGTTGCCGTGGAGACGGAGAGTAACAGCCGGCCCCGCCGCGCGCGCCCGCGGCCATGGCCACGCTGGCTCGGCTGCAAGCTCGGGCGACGTTCTT
GGCGCATCAGTACTACTTCAGGAGCAGTGTTGTAGATTTATTTAGGAAAAAGGAGTATGATGCAGCAGTTAAGATCCAGAGCTGGTTTCGAGGATGTCAAGTTCGGGCATATATCAGGCATTTACACA
GAGTAGCAACTACTATTCAAAAATGGTGGAGAAGTTACTTAGGGAGACAACAGTATCAAGTAGTTGTGAAGTTAGCATCTTGTGCTATGAAGATGAATCTCTACAACGCAATGGCTGTCAGGATTCAG
AGGCGATGGCGAGGCTATAGGATTCGGAAGTACTGCTTCAACTATTTTTATTTGAAGGAGTACCTGAGAGCTGTTTCAGAGACCAATGATGCAATTAGGGAGGCACTCGAGGAGTTTGCAGAGATGAA
AGAAAGAGAAGAGAAGAAGGCCGACCTCGAAAGGGAGGAGAAGAAAAGAGATTACCAAGCCCGAAAGATGCATTACCTCCTCAGCACGAAGCAGATTCCAGGTATATACAATTCGCCGTTCAGAAAAG
ATCCTGATCCATGGGAGCTGAGGTTACAAAAAGCAAAGCCTTTAACATGCCACAGGCCCAAAGTTAAGCAGAAGCGCTACATCAGCCTTAGCAGTTGGCTGGCTTGTACGAGTGCCCGTTCCTTTCCT
CGTTCGGAAATTCTCCCACCCATTGATAGGAAACGATGTCAGGGGCCATTCCGTGACATCACTGAAGTATTGGAACAGCGCTACAAGCCTTTGGAGCCAACGTTGCGAGTGGCAGAACCAATCGATGA
GTTAAAGGTGGCCAGAGAGGAGCTCCGAAGACAGGAATGGATGCGCAATGTAAATGACAATATGTTTTTGCCATTTTCGTCCCATCATAAAAATAAAAAGTACATCCCATTAATGCATTCATCAAGCA
AGTATGGCCCCAACTCTTATGGAAGTCAACATTTTAGAGATGAAAATCCTAGGAAGTGGATCTGTGACAAGGATTTCCAAACTGTACTACCATCATTTGATCTCTTCTCAAAATATGGAAAATCATAT
TCAAAAGCTGGACAAATTATATAAAGGGGCATGCTTTTATCAATCTGGAATTAATCTACATGTATACTCAAGCTGTTTAAATAAATTGGAAATGATGGAAGCCAGCTTTCTCAATGTTAAAGAAACAA
GTTACAAATAAGCAGGCACAAGTGGGGGAAAGCTTAGAATAACACCTGTGTGGTGGCTTAGAGATGGAGATACAGGTATGATTTATGTTAACATATATATATATACATAGATAAATACAGAAATTGAG
CTAGGTGTTTATACATGGACCATTTTAGCCCTTCTCCTGAGATGGCCTAGAAGCAATGATACGTTGGTAGCCCTGAGCACTCCCAGTGCCCAGGGCTTGGTTTTTAAACATTCTCGAACAACAGGAAC
GAGGTATCCTTGGAAAAAATAGATGGTTCTATGCTTGAGCCAAAGAAATACAAGAGCATCCTGTAGAACTGTAGTGTTGTAGTGACAAAAGCAAAGGGAGTGCTGGAAAAAAACCAAGGGGAGATCAT
GGCAAAAGAATATAGGGATCAACCTCTGAAAGAATCCCAAGGTGCCCAAACTAGGATGATTGGAGGGACCAAGTAATAATGACAGTAATGGACTATAATCCAAAGAATAATACATAGATATGACATAA
ATATGTAAATGGAGAAGAACAAACAAATCTTTGTTATAGAAGAATCTGGAATAATATAGGAAATAGATATTTCCTCCTCTAGGAGATGAAGCTTAATGCCCTTCCCCTGTGTCAGCCAGACTTAATGA
CTCACTTCCAAAGGATAGAATATGCAAAGAGAAACTAGTAACTTTATAGTGGAGAAAGCTGGCAGGTACCACTATAACCAGATAATCAAGATTAACATCACTTGGAATAAATTATATTGATTTCGTGC
GCTCTCTGATACGATGTGTACTTTACATCTCTATTATTTTCCCCCAAAACTTATGAGCCCATTATAAAATAAAATGGAGAGGTGTTCCGTAAAGCTTCCGACCAGCAGCCTTCTAAGATGTCAAAGGG
ATGGAAAAGGGCGAAGAAACAATCACAGATTAGAGGAAAACAACGGAGACATGATGCAGTGTGGGATCCTGAATTGGATCTTGGCGTAGAAAAAGGACCTTCATGGAAAAACTGGGGAATTCCGAATG
GTCTGTAGCTTAGTGGCATTGTGTCAGTGTTAATGTCTTAGTTTTAGCAGGTGCAGTGCAATTATGTCAAATATTACATTAGACAAAGCTGGGTGATCCAGGAATTTTCTGCACTATCTTGATAACTG
TTCTGACAATCTGAAAAGTGTTCCAAGATAATAAAAAAATGAAAACATACATACATAGTAAACAAATTGTATAAGATGTTACTAAAAATAATTCACTGAGAATGGGAAGAAATGACATATGAGAATGT
AAATATAATTAAAACTTTCATGACTGTACAAGCCACAGGTAATTCTTCCCAGCCTCTTGAGCATCGGTATGGTTCCAAAAACTAGAAATAATGAAGGTCAGCAAAACCAAGGGTGCTTCAGAAGCTGG
AAACGAACTCTGAAACTCGAAATTCAGCAGTCCTGCTTTGGCTTGGCTGTCTTTGACCTGCCTGCCTCCCAAGTACTGTTTATACGCAGAATAATTACCGTGCTTATCTTATGGAGTTCAAGGTACCT
TAGATCCCAGTGGCTGCATTTGTTTTGCTTTGCTGCTATTTAATTACAAACCATAATGTTTAGATCTTTTCAGGGCAGAACAATTCAATGACAACACCACTTATAGAAACAGCAAAAAAAAAAAAAAA
AA

hide sequence

RefSeq Acc Id:

XM_005640823 ⟹ XP_005640880

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	38	12,850,773 - 13,038,001 (+)	NCBI
Dog10K_Boxer_Tasha	38	12,893,460 - 13,080,214 (+)	NCBI

Sequence:

show sequence

CCCCCCCCCGGGACGAGGTTTGTGGTTCAGTCCGGTTGCCGTGGAGACGGAGAGTAACAGCCGG
CCCCGCCGCGCGCGCCCGCGGCCATGGCCACGCTGGCTCGGCTGCAAGCTCGGGCGACGTTCTTGGCGCATCAGTACTACTTCAGGAGCAGTGTTGTAGATTTATTTAGGAAAAAGGAGTATGATGCA
GCAGTTAAGATCCAGAGCTGGTTTCGAGGATGTCAAGTTCGGGCATATATCAGGCATTTACACAGAGTAGCAACTACTATTCAAAAATGGTGGAGAAGTTACTTAGGGAGACAACAGTATCAAGTAGT
TGTGAAGTTAGCATCTTGTGCTATGAAGATGAATCTCTACAACGCAATGGCTGTCAGGATTCAGAGGCGATGGCGAGGCTATAGGATTCGGAAGTACTGCTTCAACTATTTTTATTTGAAGGAGTACC
TGAGAGCTGTTTCAGAGACCAATGATGCAATTAGGGAGGCACTCGAGGAGTTTGCAGAGATGAAAGAAAGAGAAGAGAAGAAGGCCGACCTCGAAAGGGAGGAGAAGAAAAGAGATTACCAAGCCCGA
AAGATGCATTACCTCCTCAGCACGAAGCAGATTCCAGGTATATACAATTCGCCGTTCAGAAAAGATCCTGATCCATGGGAGCTGAGGTTACAAAAAGCAAAGCCTTTAACATGCCACAGGCCCAAAGT
TAAGCAGAAGCGCTACATCAGCCTTAGCAGTTGGCTGGCTTGTACGAGTGCCCGTTCCTTTCCTCGTTCGGAAATTCTCCCACCCATTGATAGGAAACGATGTCAGGGGCCATTCCGTGACATCACTG
AAGTATTGGAACAGCGCTACAAGCCTTTGGAGCCAACGTTGCGAGTGGCAGAACCAATCGATGAGTTAAAGGTGGCCAGAGAGGAGCTCCGAAGACAGGAATGGATGCGCAATGTAAATGACAATATG
TTTTTGCCATTTTCGTCCCATCATAAAAATAAAAAGTACATCCCATTAATGCATTCATCAAGCAAGTATGGCCCCAACTCTTATGGAAGTCAACATTTTAGAGATGAAAATCCTAGGAAGTGGATCTG
TGACAAGGATTTCCAAACTGTACTACCATCATTTGATCTCTTCTCAAAATATGGAAAATCATATTCAAAAGCTGGACAAATTATATAAAGCTCTTCAGTCTTGCAGTTGACTTCCTGCTCCTCATGCA
GAGATCAACTAAATTCTCAGAAACAGATGGTGTTCCCTCTACCACCAACTTACCCTTCTGCAGTTCGGCAGTTGGCAAGGCCAGATGGATTAACATCCTGGAATTAAACTTTTCACCAAATTCTTTTA
AGTAAGCAGACGTTTTATTAATATGGACTTCTGGACATGGAACAATACCCAGAGATGATTGATTGGAAAATCTAATTAAAGGCAACAATGTGGAAGAACCGAAGCAGTGAGTTCATTCTGAAAATAAG
CAACATACTGGTATCTCATACTCTTTGAATAATAAAACTGAACCGAGAATATA

hide sequence

RefSeq Acc Id:

XM_022415378 ⟹ XP_022271086

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	38	12,850,773 - 13,022,013 (+)	NCBI
Dog10K_Boxer_Tasha	38	12,893,459 - 13,064,202 (+)	NCBI

Sequence:

show sequence

CCCCCCCCCGGGACGAGGTTTGTGGTTCAGTCCGGTTGCCGTGGAGACGGAGAGTAACAGCCGG
CCCCGCCGCGCGCGCCCGCGGCCATGGCCACGCTGGCTCGGCTGCAAGCTCGGGCGACGTTCTTGGCGCATCAGTACTACTTCAGGAGCAGTGTTGTAGATTTATTTAGGAAAAAGGAGTATGATGCA
GCAGTTAAGATCCAGAGCTGGTTTCGAGGATGTCAAGTTCGGGCATATATCAGGCATTTACACAGAGTAGCAACTACTATTCAAAAATGGTGGAGAAGTTACTTAGGGAGACAACAGTATCAAGTAGT
TGTGAAGTTAGCATCTTGTGCTATGAAGATGAATCTCTACAACGCAATGGCTGTCAGGATTCAGAGGCGATGGCGAGGCTATAGGATTCGGAAGTACTGCTTCAACTATTTTTATTTGAAGGAGTACC
TGAGAGCTGTTTCAGAGACCAATGATGCAATTAGGGAGGCACTCGAGGAGTTTGCAGAGATGAAAGAAAGAGAAGAGAAGAAGGCCGACCTCGAAAGGGAGGAGAAGAAAAGAGATTACCAAGCCCGA
AAGATGCATTACCTCCTCAGCACGAAGCAGATTCCAGGTATATACAATTCGCCGTTCAGAAAAGATCCTGATCCATGGGAGCTGAGGTTACAAAAAGCAAAGCCTTTAACATGCCACAGGCCCAAAGT
TAAGCAGAAGCGCTACATCAGCCTTAGCAGTTGGCTGGCTTGTACGAGTGCCCGTTCCTTTCCTCGTTCGGAAATTCTCCCACCCATTGATAGGAAACGATGTCAGGGGCCATTCCGTGACATCACTG
AAGTATTGGAACAGCGCTACAAGCCTTTGGAGCCAACGTTGCGAGTGGCAGAACCAATCGATGAGTTAAAGGTGGCCAGAGAGGAGCTCCGAAGACAGGAATGGATGCGCAATGTAAATGACAATATG
TTTTTGCCATTTTCGTCCCATCATAAAAATAAAAAGTACATCCCATTAATGCATTCATCAAGCAAGTATGGCCCCAACTCTTATGGAAGTCAACATTTTAGAGATGAAAATCCTAGGAAGTGGATCTG
TGACAAGGATTTCCAAACTGTACTACCATCATTTGATCTCTTCTCAAAATATGGAAAATCATATTCAAAAGCTGGACAAATTATATAAAGCCAAATGTGAAGGAGATTCCAGATGAAGACAGCAAAGC
TCACTCTAGTTGAAGGAATGAGGCAGGAATGAGAAATCATGCTGAGTGGAATTCCCCAGGTAACGTGTCAACCTCAAGAAGCAAAGGAAAGCACCTATCTGTTGGAAGGAGCACAGCATAGATACAGG
CAACTTCTGTTCTGTAGATTTAGTGTTAGTGTCACTTCTCCCCCACTTACAGCTTTAGA

hide sequence

RefSeq Acc Id:

XM_038448446 ⟹ XP_038304374

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	38	12,883,601 - 13,071,188 (+)	NCBI

RefSeq Acc Id:

XM_038448447 ⟹ XP_038304375

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	38	12,883,600 - 13,091,323 (+)	NCBI

RefSeq Acc Id:

XM_038448449 ⟹ XP_038304377

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	38	12,883,600 - 13,055,196 (+)	NCBI

RefSeq Acc Id:

XM_038522354 ⟹ XP_038378282

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	38	12,893,897 - 13,081,020 (+)	NCBI

RefSeq Acc Id:

XM_038522355 ⟹ XP_038378283

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	38	12,893,896 - 13,101,103 (+)	NCBI

RefSeq Acc Id:

XM_038522356 ⟹ XP_038378284

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	38	12,893,896 - 13,064,833 (+)	NCBI

RefSeq Acc Id:

XM_038586158 ⟹ XP_038442086

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	38	13,549,669 - 13,757,219 (+)	NCBI

RefSeq Acc Id:

XM_038586159 ⟹ XP_038442087

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	38	13,549,669 - 13,720,889 (+)	NCBI

RefSeq Acc Id:

XM_038586160 ⟹ XP_038442088

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	38	13,549,364 - 13,737,087 (+)	NCBI

RefSeq Acc Id:

XM_038650561 ⟹ XP_038506489

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	38	13,240,511 - 13,427,600 (+)	NCBI

RefSeq Acc Id:

XM_038650562 ⟹ XP_038506490

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	38	13,240,510 - 13,447,681 (+)	NCBI

RefSeq Acc Id:

XM_038650563 ⟹ XP_038506491

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	38	13,240,510 - 13,411,609 (+)	NCBI


Protein RefSeqs	XP_005640879	(Get FASTA)	NCBI Sequence Viewer
	XP_005640880	(Get FASTA)	NCBI Sequence Viewer
	XP_022271086	(Get FASTA)	NCBI Sequence Viewer
	XP_038304374	(Get FASTA)	NCBI Sequence Viewer
	XP_038304375	(Get FASTA)	NCBI Sequence Viewer
	XP_038304377	(Get FASTA)	NCBI Sequence Viewer
	XP_038378282	(Get FASTA)	NCBI Sequence Viewer
	XP_038378283	(Get FASTA)	NCBI Sequence Viewer
	XP_038378284	(Get FASTA)	NCBI Sequence Viewer
	XP_038442086	(Get FASTA)	NCBI Sequence Viewer
	XP_038442087	(Get FASTA)	NCBI Sequence Viewer
	XP_038442088	(Get FASTA)	NCBI Sequence Viewer
	XP_038506489	(Get FASTA)	NCBI Sequence Viewer
	XP_038506490	(Get FASTA)	NCBI Sequence Viewer
	XP_038506491	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000015890.2
	ENSCAFP00000049853.1
	ENSCAFP00000052910.1
	ENSCAFP00000056093.2
	ENSCAFP00040021201.1
	ENSCAFP00040021257.1
	ENSCAFP00040021344.1
	ENSCAFP00845038679
	ENSCAFP00845038679.1
	ENSCAFP00845038727.1
	ENSCAFP00845038791.1
	ENSCAFP00845038829.1

RefSeq Acc Id:

XP_005640879 ⟸ XM_005640822

- UniProtKB:

A0A8C0JVC3 (UniProtKB/TrEMBL), A0A8C0SJD7 (UniProtKB/TrEMBL), A0A8I3PYM2 (UniProtKB/TrEMBL), A0A8C0SH69 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MATLARLQARATFLAHQYYFRSSVVDLFRKKEYDAAVKIQSWFRGCQVRAYIRHLHRVATTIQKWWRSYLGRQQYQVVVKLASCAMKMNLYNAMAVRIQRRWRGYRIRKYCFNYFYLKEYLRAVSETN
DAIREALEEFAEMKEREEKKADLEREEKKRDYQARKMHYLLSTKQIPGIYNSPFRKDPDPWELRLQKAKPLTCHRPKVKQKRYISLSSWLACTSARSFPRSEILPPIDRKRCQGPFRDITEVLEQRYK
PLEPTLRVAEPIDELKVAREELRRQEWMRNVNDNMFLPFSSHHKNKKYIPLMHSSSKYGPNSYGSQHFRDENPRKWICDKDFQTVLPSFDLFSKYGKSYSKAGQII

hide sequence

RefSeq Acc Id:

XP_005640880 ⟸ XM_005640823

- UniProtKB:

A0A8C0JVC3 (UniProtKB/TrEMBL), A0A8C0SJD7 (UniProtKB/TrEMBL), A0A8I3PYM2 (UniProtKB/TrEMBL), A0A8C0SH69 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MATLARLQARATFLAHQYYFRSSVVDLFRKKEYDAAVKIQSWFRGCQVRAYIRHLHRVATTIQKWWRSYLGRQQYQVVVKLASCAMKMNLYNAMAVRIQRRWRGYRIRKYCFNYFYLKEYLRAVSETN
DAIREALEEFAEMKEREEKKADLEREEKKRDYQARKMHYLLSTKQIPGIYNSPFRKDPDPWELRLQKAKPLTCHRPKVKQKRYISLSSWLACTSARSFPRSEILPPIDRKRCQGPFRDITEVLEQRYK
PLEPTLRVAEPIDELKVAREELRRQEWMRNVNDNMFLPFSSHHKNKKYIPLMHSSSKYGPNSYGSQHFRDENPRKWICDKDFQTVLPSFDLFSKYGKSYSKAGQII

hide sequence

RefSeq Acc Id:

XP_022271086 ⟸ XM_022415378

- UniProtKB:

A0A8C0JVC3 (UniProtKB/TrEMBL), A0A8C0SJD7 (UniProtKB/TrEMBL), A0A8I3PYM2 (UniProtKB/TrEMBL), A0A8C0SH69 (UniProtKB/TrEMBL)

- Sequence:

show sequence

MATLARLQARATFLAHQYYFRSSVVDLFRKKEYDAAVKIQSWFRGCQVRAYIRHLHRVATTIQKWWRSYLGRQQYQVVVKLASCAMKMNLYNAMAVRIQRRWRGYRIRKYCFNYFYLKEYLRAVSETN
DAIREALEEFAEMKEREEKKADLEREEKKRDYQARKMHYLLSTKQIPGIYNSPFRKDPDPWELRLQKAKPLTCHRPKVKQKRYISLSSWLACTSARSFPRSEILPPIDRKRCQGPFRDITEVLEQRYK
PLEPTLRVAEPIDELKVAREELRRQEWMRNVNDNMFLPFSSHHKNKKYIPLMHSSSKYGPNSYGSQHFRDENPRKWICDKDFQTVLPSFDLFSKYGKSYSKAGQII

hide sequence

Ensembl Acc Id:

ENSCAFP00000049853 ⟸ ENSCAFT00000083323

Ensembl Acc Id:

ENSCAFP00000056093 ⟸ ENSCAFT00000066401

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000010794	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00040013120	UniProtKB/TrEMBL
	ENSCAFG00845027919	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000017171.4	UniProtKB/TrEMBL
	ENSCAFT00000066401.2	UniProtKB/TrEMBL
	ENSCAFT00000076390.2	UniProtKB/TrEMBL
	ENSCAFT00000083323.2	UniProtKB/TrEMBL
	ENSCAFT00040024400.1	UniProtKB/TrEMBL
	ENSCAFT00040024469.1	UniProtKB/TrEMBL
	ENSCAFT00040024561.1	UniProtKB/TrEMBL
	ENSCAFT00845049286	ENTREZGENE
	ENSCAFT00845049286.1	UniProtKB/TrEMBL
	ENSCAFT00845049356.1	UniProtKB/TrEMBL
	ENSCAFT00845049440.1	UniProtKB/TrEMBL
	ENSCAFT00845049492.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.5.190	UniProtKB/TrEMBL
InterPro	ASPM	UniProtKB/TrEMBL
	IQ_motif_EF-hand-BS	UniProtKB/TrEMBL
	P-loop_NTPase	UniProtKB/TrEMBL
KEGG Report	cfa:608327	UniProtKB/TrEMBL
NCBI Gene	SPATA17	ENTREZGENE
PANTHER	SPERMATOGENESIS-ASSOCIATED PROTEIN 17	UniProtKB/TrEMBL
	UNCHARACTERIZED	UniProtKB/TrEMBL
Pfam	PF00612	UniProtKB/TrEMBL
PROSITE	PS50096	UniProtKB/TrEMBL
SMART	SM00015	UniProtKB/TrEMBL
Superfamily-SCOP	SSF52540	UniProtKB/TrEMBL
UniProt	A0A8C0JVC3	ENTREZGENE
	A0A8C0SH69	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0SJD7	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0YXE3_CANLF	UniProtKB/TrEMBL
	A0A8I3PYM2	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3PYQ5_CANLF	UniProtKB/TrEMBL
	A0A8I3QFC1_CANLF	UniProtKB/TrEMBL
	A0A8I3SBA5_CANLF	UniProtKB/TrEMBL
	A0A8P0P5D7_CANLF	UniProtKB/TrEMBL
	A0A8P0T2J0_CANLF	UniProtKB/TrEMBL
	A0A8P0T5D8_CANLF	UniProtKB/TrEMBL
VGNC ID	VGNC:46705	ENTREZGENE

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailable


InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailable


Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
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MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable

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Imported Disease Annotations - ClinVar