Gene: Spata17 (spermatogenesis associated 17) Rattus norvegicus
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Symbol: Spata17
Name: spermatogenesis associated 17
Description: ASSOCIATED WITH Loeys-Dietz syndrome 4 (ortholog); Usher syndrome (ortholog); INTERACTS WITH 2,3,7,8-tetrachlorodibenzodioxine; bisphenol A; thioacetamide
Type: protein-coding
RefSeq Status: MODEL
Also known as: LOC498305; RGD1565282; similar to RIKEN cDNA 4930513F16; spermatogenesis-associated protein 17
Orthologs:
Homo sapiens (human) : SPATA17 (spermatogenesis associated 17)  HGNC  Alliance
Mus musculus (house mouse) : Spata17 (spermatogenesis associated 17)  MGI  Alliance
Chinchilla lanigera (long-tailed chinchilla) : Spata17 (spermatogenesis associated 17)
Pan paniscus (bonobo/pygmy chimpanzee) : SPATA17 (spermatogenesis associated 17)
Canis lupus familiaris (dog) : SPATA17 (spermatogenesis associated 17)
Ictidomys tridecemlineatus (thirteen-lined ground squirrel) : Spata17 (spermatogenesis associated 17)
more info ...
Latest Assembly: Rnor_6.0 - RGSC Genome Assembly v6.0
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rnor_6.013105,489,121 - 105,684,293 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_5.013110,139,348 - 110,334,033 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.413103,171,233 - 103,353,833 (-)NCBIRGSC3.4rn4RGSC3.4
Celera1398,106,089 - 98,283,909 (-)NCBICelera
Cytogenetic Map13q26NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations
Gene-Chemical Interaction Annotations
References - curated
RGD Disease Portals

Genomics

Comparative Map Data
Position Markers
QTLs in Region (Rnor_6.0)
miRNA Target Status

Sequence

Nucleotide Sequences
Protein Sequences
Transcriptome
Promoters

Strain Variation

Strain Sequence Variants (Rnor 5.0)

Additional Information

External Database Links
Nomenclature History
 
More on Spata17
Alliance Gene
NCBI Gene
Ensembl Gene
JBrowse: rn5 rn6
NCBI Genome Data Viewer

RGD Object Information
RGD ID: 1565282
Created: 2006-02-09
Species: Rattus norvegicus
Last Modified: 2018-08-08
Status: ACTIVE