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Gene: CBFA2T3 (CBFA2/RUNX1 partner transcriptional co-repressor 3) Canis lupus familiaris

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Symbol:

CBFA2T3

Name:

CBFA2/RUNX1 partner transcriptional co-repressor 3

RGD ID:

12053028

Description:

ENCODES a protein that exhibits chromatin binding (ortholog); INVOLVED IN granulocyte differentiation (ortholog); negative regulation of transcription by RNA polymerase II (ortholog); ASSOCIATED WITH 16Q24.3 Microdeletion Syndrome (ortholog); autistic disorder (ortholog); autosomal recessive chronic granulomatous disease 4 (ortholog); FOUND IN nucleoplasm (inferred); nucleus (inferred)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

CBFA2/RUNX1 translocation partner 3; protein CBFA2T3

RGD Orthologs

Alliance Orthologs

More Info

more info ...

Latest Assembly:

CanFam3.1 - Dog CanFam3.1 Assembly

Position:

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	64,432,291 - 64,518,905 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	64,431,843 - 64,519,528 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	64,443,579 - 64,529,331 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	64,652,241 - 64,738,015 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	64,652,160 - 64,738,015 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	64,678,376 - 64,764,153 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	64,510,060 - 64,595,977 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	64,915,902 - 65,001,888 (+)	NCBI		UU_Cfam_GSD_1.0

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

16Q24.3 Microdeletion Syndrome (ISO)

autistic disorder (ISO)

autosomal recessive chronic granulomatous disease 4 (ISO)

Fanconi anemia (ISO)

KBG syndrome (ISO)

primary ciliary dyskinesia 33 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

DNA-templated transcription (IEA)

granulocyte differentiation (IEA,ISO)

negative regulation of cell population proliferation (IEA)

negative regulation of DNA-templated transcription (IBA,IEA)

negative regulation of glycolytic process (IEA)

negative regulation of transcription by RNA polymerase II (ISO)

positive regulation of proteasomal ubiquitin-dependent protein catabolic process (IEA)

regulation of aerobic respiration (IEA)

regulation of DNA-templated transcription (IEA)

response to hypoxia (IEA)

Cellular Component

nucleoplasm (IEA)

nucleus (IBA,IEA)

Molecular Function

chromatin binding (ISO)

protein binding (ISO)

transcription corepressor activity (IBA,IEA)

zinc ion binding (IEA)

References

Additional References at PubMed

PMID:22301074	PMID:30032202

Genomics

Comparative Map Data

CBFA2T3
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	5	64,432,291 - 64,518,905 (+)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	5	64,431,843 - 64,519,528 (+)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	5	64,443,579 - 64,529,331 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	5	64,652,241 - 64,738,015 (+)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	5	64,652,160 - 64,738,015 (+)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	5	64,678,376 - 64,764,153 (+)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	5	64,510,060 - 64,595,977 (+)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	5	64,915,902 - 65,001,888 (+)	NCBI		UU_Cfam_GSD_1.0

CBFA2T3
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	16	88,874,858 - 88,977,207 (-)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	16	88,874,858 - 88,977,207 (-)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	16	88,941,266 - 89,043,615 (-)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	16	87,468,768 - 87,570,902 (-)	NCBI	NCBI36	Build 36	hg18	NCBI36
Build 34	16	87,468,767 - 87,535,109	NCBI
Celera	16	74,009,858 - 74,110,779 (-)	NCBI		Celera
Cytogenetic Map	16	q24.3	NCBI
HuRef	16	74,638,423 - 74,739,781 (-)	NCBI		HuRef
CHM1_1	16	90,352,535 - 90,454,228 (-)	NCBI		CHM1_1
T2T-CHM13v2.0	16	94,945,216 - 95,054,578 (-)	NCBI		T2T-CHM13v2.0

Cbfa2t3
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	8	123,351,875 - 123,426,069 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	8	123,351,880 - 123,425,848 (-)	Ensembl		GRCm39 Ensembl
GRCm38	8	122,625,136 - 122,699,332 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	8	122,625,141 - 122,699,109 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	8	125,149,036 - 125,223,009 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	8	125,516,082 - 125,585,069 (-)	NCBI		MGSCv36	mm8
Celera	8	126,854,512 - 126,929,272 (-)	NCBI		Celera
Cytogenetic Map	8	E1	NCBI
cM Map	8	71.93	NCBI

Cbfa2t3
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	19	67,584,319 - 67,658,533 (-)	NCBI		GRCr8
mRatBN7.2	19	50,679,897 - 50,750,028 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	19	50,680,729 - 50,749,610 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	19	57,475,521 - 57,544,200 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	19	58,155,645 - 58,224,522 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	19	60,374,139 - 60,442,815 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	19	55,438,409 - 55,510,652 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	19	55,441,572 - 55,510,460 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	19	66,145,151 - 66,218,784 (-)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	19	52,908,942 - 52,980,399 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	19	52,913,754 - 53,012,742 (-)	NCBI
Celera	19	49,920,125 - 49,988,577 (-)	NCBI		Celera
Cytogenetic Map	19	q12	NCBI

Cbfa2t3
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0 Ensembl	NW_004955541	2,724,312 - 2,777,592 (-)	Ensembl	ChiLan1.0
ChiLan1.0	NW_004955541	2,724,369 - 2,777,540 (-)	NCBI	ChiLan1.0	ChiLan1.0

CBFA2T3
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	18	98,653,425 - 98,722,537 (-)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	16	104,565,877 - 104,634,627 (-)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	16	69,592,293 - 69,662,321 (-)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	16	89,246,545 - 89,347,435 (-)	NCBI	panpan1.1	PanPan1.1	panPan2
PanPan1.1 Ensembl	16	89,246,545 - 89,347,435 (-)	Ensembl	panpan1.1		panPan2

Cbfa2t3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024409349	25,056,311 - 25,121,988 (+)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936641	810,074 - 875,534 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936641	857,483 - 875,527 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

CBFA2T3
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	6	779,366 - 853,822 (+)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	6	779,164 - 854,449 (+)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	6	1,022,699 - 1,044,424 (+)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

CBFA2T3
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	5	74,260,516 - 74,361,268 (-)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	5	74,263,375 - 74,289,875 (-)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666047	1,300,151 - 1,364,549 (+)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Cbfa2t3
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624746	716,836 - 773,169 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624746	716,848 - 773,169 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Variants

Variants in CBFA2T3
1062 total Variants

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Download All Expressed Objects for this Gene

adipose tissue	alimentary part of gastrointestinal system	circulatory system	ectoderm	endocrine system	endoderm	exocrine system	hemolymphoid system	hepatobiliary system	integumental system	mesenchyme	mesoderm	nervous system	reproductive system	respiratory system
6	5	5	23	22	16	6	6	6	6	33	22	12	14	10

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_005620565	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005620568	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_005620569	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022419084	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_022419085	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476881	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476882	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476883	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476884	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476885	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476886	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476887	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038476888	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038525189	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038525197	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038525208	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038525227	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038525256	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038538042	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038538043	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038538044	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038538045	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038538046	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038538047	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038538048	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038538049	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038602913	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666782	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666783	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666784	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666785	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666786	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666787	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666788	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_038666789	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	AAEX04000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAHUQ010000065	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAQRD010000089	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	JAAUVH010000371	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	REHQ01000005	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

Ensembl Acc Id:

ENSCAFT00000031590 ⟹ ENSCAFP00000029410

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	5	64,487,070 - 64,519,528 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000049796 ⟹ ENSCAFP00000042761

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	5	64,431,843 - 64,519,528 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000064348 ⟹ ENSCAFP00000056584

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	5	64,431,843 - 64,519,528 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000066937 ⟹ ENSCAFP00000054010

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	5	64,462,940 - 64,519,528 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000079958 ⟹ ENSCAFP00000045885

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	5	64,462,940 - 64,519,528 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00000090835 ⟹ ENSCAFP00000065354

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1 Ensembl	5	64,462,940 - 64,519,528 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845005184 ⟹ ENSCAFP00845004117

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	5	64,652,160 - 64,738,015 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845005204 ⟹ ENSCAFP00845004135

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	5	64,652,160 - 64,738,015 (+)	Ensembl

Ensembl Acc Id:

ENSCAFT00845005221 ⟹ ENSCAFP00845004149

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0 Ensembl	5	64,656,920 - 64,738,015 (+)	Ensembl

RefSeq Acc Id:

XM_005620565 ⟹ XP_005620622

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	5	64,432,291 - 64,518,905 (+)	NCBI
Dog10K_Boxer_Tasha	5	64,443,579 - 64,529,331 (+)	NCBI

Sequence:

show sequence

CTCGCCTGCTGGCTGCGGGGAGACCTCCCCCACCGGCGCCTCCCCAGGCCCGCCCTGCATCACA
TGAGCCCCTGCGGCCGCCCGCCCCTTCCCCAGGCTGGCGGGCAGCGCGAGGAGGCCCGGAGCTG
TCTGGGGCCGGAGGCCTCCGCTGTGAGAAGGCCAGGCTGGCTGTGGCCTCCCATCCGTTCCCCA
CGCGGTCGGGAAAGGCGCTCCAGCAGCTCTGGGGCGCTGGCCTCGTGTCGGCCCCAGAAGGCTG
CCCACCACTCGCCCGGCACCAGGACTGTCTCCCAGACCCACCTCTGGACCCATGTCCCGGGCAT
CCCCCTTGCTGGACAGCAGGCTCCCGGCGTCCACCAGCGGCTCAGTGCCCCGGGGTCCCAGGAA
GGGCGGCCCAGTGGACAGGACGGACAAGACAGCGACGATGCCCGACTCACCTGCAGAAGTGAAG
ACGCAGCCCCGCTCCACACCCCCCGGCATGCCGCCCCCACCACCTGCCGCATCGCAGGGGGCCA
CCCGACTCCCCTCCTTCACGCCACACACAAATGGAGAGGACGGACCCACGATGTCCCTGCCCCA
TGGCCGTTTTCATGGCTGCTTAAAATGGTCTATGGTCTGTCTTTTGATGAACGGTAGCCACTCT
CCGACAGCCGTCAACGGTGCCCCATCCATGCCCAGTGGCTTCAGCAATGGCCCAGCCACCTCGT
CCACAGCCTCGCTGTCCACACAGCACCTGCCCCCTGCCTGTGGGGCACGGCAACTCAGCAAGCT
CAAGCGATTTCTCACCACCCTGCAGCAGTTTGGCAGCGACATCTCCCCAGAGATCGGGGAGCGT
GTGCGCACACTGGTGCTGGGGCTCGTGAACTCCACGCTGACCATTGAGGAGTTCCATTCTAAGC
TCCAAGAGGCCACCAACTTCCCTCTGCGTCCATTCGTCATTCCCTTCCTGAAGGCAAACCTGCC
CTTGCTGCAGAGGGAACTCCTGCACTGCGCCCGCCTGGCCAAGCAGACCCCTGCCCAGTACCTG
GCCCAGCACGAGCAGCTCCTGCTGGATGCCAACGCCTCCTCCCCCATCGACTCCTCGGAGCTCC
TCCTGGAAGTCAACGAGAACGGCAAAAGGAGGACACCTGACAGGACCAAAGAGAACGGGTCAGA
CCGTGACCCACTGCACCCCGACCACCTCAGCAAACGGCCCTGTACCCTGAGCCCCGCGCAGCGC
TACAGCCCCAGCAATGGGCTGCCCCACCCCACGCCACCGCCACACTACCGGCTGGAAGACATAG
CCATGGCCCACCACCTCCGTGACACCTATCGCCACTCTGACCCCCGGGAGCTGCGGGAGCGCCA
TCGGCACCTTGCGGTGCACGGGTCCCGGCAGGAGGAAGTGATCGACCACAGGCTCACGGAGCGG
GAGTGGGCCGAGGAGTGGAAGCATCTCAACAACCTCCTGAACTGTATCATGGACATGGCTGAGA
AGACACGGCGGTCACTCACGGTTCTGCGCCAGTGCCAGGAGGCCGACCGTGAGGAGCTTAACCA
CTGGATCCGGCGCTACAGTGACACGGAGGATGCCAAGAAGGGCCCCGTACCTGCCACTGCCCGG
CCCCTGAACAGCTCCGTGGGTGCAGAGGGCTCTCAGCTAGACGCCCACCGGGAGTTCATGCCTA
GGACCCTCTCCGGCTACATGCCTGAGGAGATATGGAGGAAGGCTGAAGAGGCGGTGAATGAGGT
GAAGCGGCAGGCGATGTCTGAGCTGCAAAAAGCCGTGTCAGATGCCGAGCGAAAAGCCCACGAG
CTCATCAGCACAGAACGTGCCAAGATGGAGCGGGCCTTGGCTGAAGCCCGGCGGCAGGCCTCAG
AGGACGCTCTGACTGTCATCAACCAGCAGGAGGACTCCAGCGAGAGCTGCTGGAACTGCGGGCG
CAAGGCCAGTGAGACGTGCAGTGGCTGCAACGCGGCGCGCTACTGCGGCTCCTTCTGCCAGCAC
CGGGACTGGGAGAAGCACCACCATGTGTGTGGCCAGAGCCTGCAGGGCCCCGCGGCCGCCGTGG
CCGACCCGGGGCCTGCACAGCCCGACGCCACGGCCAGCCTGGGCCCCTGCCTGCCCGCAGGAGC
CGCCAGCCCCAGCGAGGCCAGCTCCGCGGGCCCGTCCCGCCCCGGCTCCCCCGGCCCACCTGGG
CCCCTGGACGCCGCGCCCCGCTGACCCCCCACCGCCCCGGCCCACGGAGGCCACACCCTCTGGC
CCCTCTGGCCCCCCCAGCCCGCCGGACGCTGCCCCGGCTCTGGGAGCCACTGCTGCTACTGCTT
CTCTCCAAAAGTAAACAGAACCAACAAAAACTGCATCAACGCAACTTCCTCAGCTACCTGACGG
TCTCACGCCGTGACCGCTCCAAGCGTCCTCAGAGCCCCCCACTGAGCTTTAGCCGAAGGAGCAG
TGGCCTGAGCGTGACCGGCCTGTCCCTCCTCCGCCTGGCCCCTTCCCACTCACGCTCCCGTTTT
TCTGTCTTTCTGACTCTCGCATACTTTCTCTTTACTGAAAAAATCTGTTAGGGGGCTTATATTC
TCAGCGTTACATTTTGGGGGGTTTGTGGAACAGACATACTCAGAAGTGGACAAGGAAAGGGGGG
TTTTGTCCCCTTCCTGATGAAAAAGGGAAACGGAAATTCACATCTTAACTGCTGGAGGTCTGAG
CCGCTGTGGCCCAGCGCCACCCCAGGGGCATGTGGCCAACACAGTGAAGATGGTAAGAAAGACT
TCAATTTCCAACTCAAGAAACATTTTCCAGATTTTTTTTCCTTTAGTGTCAAACTCTTTGGCTT
TAAGTAGAAATCCAAAAAGTTTTTTTTTTTTTTTAAAAAAAAAAAAAAAGAAAGAAAGCATACC
TGTAAACTACCTTGCCAGCTAGCCAGCCAAGGACGCCGGACACACCTCTGCTCCAAAGGAAATC
CAAAAAGCAAACACAAGAAGTCAAAATCCAAAATGGTTTTGTCACTGCCAAAGTATCTCGTCCA
CGGTTTTCCTCCCCTCTTGGATCTGTTCAGGTGTCGTCCTGCTCTCTTGCTTTGATCTGTGTTT
GGGGTGTGGGGACTTTGGGGTTGGGGGGGTTTCACTCAACGAGAAGGAACGTGTGTTTCTCTGC
CATGACTGCTGGCGCAAGGGAGGGTGCCCTGCCCATGTGCGTGCGCATCCTGTGTCCCTGTGTG
CAGGGGGCTGCCCCGTCTGTCCTCACACCTCCATGAACTGTCACCACGTCGCGTGTTTGCCACT
TGTGACAAAGCGCTAATGTGTCCTGCCCGGGAGAGAATCTCTCTGGAACAAAA

hide sequence

RefSeq Acc Id:

XM_005620569 ⟹ XP_005620626

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	5	64,463,980 - 64,517,788 (+)	NCBI
Dog10K_Boxer_Tasha	5	64,475,268 - 64,529,331 (+)	NCBI

Sequence:

show sequence

TCGCCCCCGAGTTACGGAGGCGGGGACCGAGTTCCAAGGAGGAGCCGCTTCGGGAGCGCGGCCG
CCTGCCCCCGCCGGACCTGCGGACCTGGACAGGACGGACAAGACAGCGACGATGCCCGACTCAC
CTGCAGAAGTGAAGACGCAGCCCCGCTCCACACCCCCCGGCATGCCGCCCCCACCACCTGCCGC
ATCGCAGGGGGCCACCCGACTCCCCTCCTTCACGCCACACACAAATGGAGAGGACGGACCCACG
ATGTCCCTGCCCCATGGCCGTTTTCATGGCTGCTTAAAATGGTCTATGGTCTGTCTTTTGATGA
ACGGTAGCCACTCTCCGACAGCCGTCAACGGTGCCCCATCCATGCCCAGTGGCTTCAGCAATGG
CCCAGCCACCTCGTCCACAGCCTCGCTGTCCACACAGCACCTGCCCCCTGCCTGTGGGGCACGG
CAACTCAGCAAGCTCAAGCGATTTCTCACCACCCTGCAGCAGTTTGGCAGCGACATCTCCCCAG
AGATCGGGGAGCGTGTGCGCACACTGGTGCTGGGGCTCGTGAACTCCACGCTGACCATTGAGGA
GTTCCATTCTAAGCTCCAAGAGGCCACCAACTTCCCTCTGCGTCCATTCGTCATTCCCTTCCTG
AAGGCAAACCTGCCCTTGCTGCAGAGGGAACTCCTGCACTGCGCCCGCCTGGCCAAGCAGACCC
CTGCCCAGTACCTGGCCCAGCACGAGCAGCTCCTGCTGGATGCCAACGCCTCCTCCCCCATCGA
CTCCTCGGAGCTCCTCCTGGAAGTCAACGAGAACGGCAAAAGGAGGACACCTGACAGGACCAAA
GAGAACGGGTCAGACCGTGACCCACTGCACCCCGACCACCTCAGCAAACGGCCCTGTACCCTGA
GCCCCGCGCAGCGCTACAGCCCCAGCAATGGGCTGCCCCACCCCACGCCACCGCCACACTACCG
GCTGGAAGACATAGCCATGGCCCACCACCTCCGTGACACCTATCGCCACTCTGACCCCCGGGAG
CTGCGGGAGCGCCATCGGCACCTTGCGGTGCACGGGTCCCGGCAGGAGGAAGTGATCGACCACA
GGCTCACGGAGCGGGAGTGGGCCGAGGAGTGGAAGCATCTCAACAACCTCCTGAACTGTATCAT
GGACATGGCTGAGAAGACACGGCGGTCACTCACGGTTCTGCGCCAGTGCCAGGAGGCCGACCGT
GAGGAGCTTAACCACTGGATCCGGCGCTACAGTGACACGGAGGATGCCAAGAAGGGCCCCGTAC
CTGCCACTGCCCGGCCCCTGAACAGCTCCGTGGGTGCAGAGGGCTCTCAGCTAGACGCCCACCG
GGAGTTCATGCCTAGGACCCTCTCCGGCTACATGCCTGAGGAGATATGGAGGAAGGCTGAAGAG
GCGGTGAATGAGGTGAAGCGGCAGGCGATGTCTGAGCTGCAAAAAGCCGTGTCAGATGCCGAGC
GAAAAGCCCACGAGCTCATCAGCACAGAACGTGCCAAGATGGAGCGGGCCTTGGCTGAAGCCCG
GCGGCAGGCCTCAGAGGACGCTCTGACTGTCATCAACCAGCAGGAGGACTCCAGCGAGAGCTGC
TGGAACTGCGGGCGCAAGGCCAGTGAGACGTGCAGTGGCTGCAACGCGGCGCGCTACTGCGGCT
CCTTCTGCCAGCACCGGGACTGGGAGAAGCACCACCATGTGTGTGGCCAGAGCCTGCAGGGCCC
CGCGGCCGCCGTGGCCGACCCGGGGCCTGCACAGCCCGACGCCACGGCCAGCCTGGGCCCCTGC
CTGCCCGCAGGAGCCGCCAGCCCCAGCGAGGCCAGCTCCGCGGGCCCGTCCCGCCCCGGCTCCC
CCGGCCCACCTGGGCCCCTGGACGCCGCGCCCCGCTGA

hide sequence

RefSeq Acc Id:

XM_022419085 ⟹ XP_022274793

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	5	64,485,106 - 64,517,788 (+)	NCBI
Dog10K_Boxer_Tasha	5	64,498,046 - 64,529,331 (+)	NCBI

Sequence:

show sequence

ACTCCCAGAGCTTCAGGACTAGTGCTGGGCAAGGAGGGCACCCCTTCCTTCTCTGCCTCTCCCC
CCTGCAGGCGGCCAGATGGCAGGGTGCCTCCCCCTCAGCTCTTAGGGAACCGCTCTTGGCGACA
CAGCCCCAGCAGCTGGGCGAGGAATGTGCTTCCTTTGTGCGCCAGCGGCAGGCAGGGCGAGCAG
GCCCGGCATCTGGATCGTGTTTGCAGCCCTTTGGAGAGCATGGAAGGTTTTCATTCCAGCAGCT
TTGAGCTCTCCACCCTCCCCTGCCTTTTAACCATTTGCTTAACGCTGGGATGCTGTGAAGACTG
GGTTACAGACTGTCAGCGGAACTTGGGTCCGAGACAGTCTCACCTATTCCACTTGTTTGGGGCA
TCTGCAGTCGGTGGGAGCTGTGGGCTGTGTGGTGCAACCGAAATCCCAGACTCTTCTTGAGAAC
AGAGGCCAGGAACATGCTGGTTCTGAGCCGCTTTCCACCCAGGAGCCAGTTACTTCCGTGTCTG
GTCATTTTTCTGTGCATGAGTTTGCTTTCAAGATAGAATTGCATGTGCTTATCACCTCTTGATC
TGTGTGGATCGCTTTTCCATATCACTAGATAGTGTTCCAGGGCCCCATTTTTGCTAGCCAGTGG
GCACGTAAGTACCACACATGGAAATCCACAGCTTGAACTCTCACAGCATGCCGGATAACAAACG
TTGGCTGACCTGCCCCTGGTCCTGGGCCCCAGGCCCTGGGCCCCACTTGGTCACTCCTGACTCA
GTATGAGTCTAGCACCACCTGGCCTGTTTCTGCACTTTGTAGAAGTGGAATTGCGTGGCATGTG
CTGCTTGGGGTCTGGCGTCATCGGCTCAGCTGTACACATGTGAGGTTTGTCTGTGTTGGTGCAC
GTGGCTGTATGTGGTGGTTTTTTCCCTTGCTGTATCGGATCCCATAAGCCATTTCCCCCTTCAA
TTCTTGATGGATGTTTGGACGGCTTCCAATTTGGGCCTTTGACAAAATGGCGGATGAATATTCC
TGCTCCTTGCTGCTGATGCACCCATGTGTGCACCCAGCAGAGAGATTGCTGTGTGGTGGGGTGT
GTGATGCAAGCTGGTAGATGCTGAAAAACAGTTGCTAAAGCAGACATACCTATAGCATGATTCC
TAAGGCTGCATAGTATTTTTGTGTCAACCGGAGAATATCCTTAGCCAGCCTTCAACTGGGGTCA
TCTTACTTGTCTCCTGTTTTCACTCTTATAAACAACACAGTGATGTACATTCTAATAGATAACT
GTGTGCGTCTCTGACAGTTTCCTTAGAGCACAGGTAGGGGTGCCTGTCCAGGCAGAGAAGCTGC
CACAGGAGGAGTGAGGAGCAGAGGCAGGAGTCTCAGACTCAACTGACATTTGCCATCTGTGTGA
TCTGATCGACTAACCCCTGAGGTCCCTTCCAGCTCCCGTGTGTTGTGGTTCTAAATACCCACGT
GTATCAGCTAGTTATTATTGTGTAATAAACCACCCCAAAACCTCACTGCTAAAGTAACCACCAT
TATTTGGCTCAGAGTTCTGTAGGTGGGCAGTTCTGGTCCCACTGGGCTTGCTTTTGGGTCTGTG
GTCAGCAGCTCTGCTGAATGTGGCTGGGCCTCTGGTGTGTTTGGAGACTCGGCTGGGCCCACTC
TGCCCGCACATTCCCATCCTCCAGCAGGCTGGCTGAGCAGGAGAATAAGTGCAGCTGATGCTTC
TCGTATCCAGGCTCAGAGTTGGCTGACATCGCTTCCACCGCATCCAGATGGACAGGACGGACAA
GACAGCGACGATGCCCGACTCACCTGCAGAAGTGAAGACGCAGCCCCGCTCCACACCCCCCGGC
ATGCCGCCCCCACCACCTGCCGCATCGCAGGGGGCCACCCGACTCCCCTCCTTCACGCCACACA
CAAATGGAGAGGACGGACCCACGATGTCCCTGCCCCATGGCCGTTTTCATGGCTGCTTAAAATG
GTCTATGGTCTGTCTTTTGATGAACGGTAGCCACTCTCCGACAGCCGTCAACGGTGCCCCATCC
ATGCCCAGTGGCTTCAGCAATGGCCCAGCCACCTCGTCCACAGCCTCGCTGTCCACACAGCACC
TGCCCCCTGCCTGTGGGGCACGGCAACTCAGCAAGCTCAAGCGATTTCTCACCACCCTGCAGCA
GTTTGGCAGCGACATCTCCCCAGAGATCGGGGAGCGTGTGCGCACACTGGTGCTGGGGCTCGTG
AACTCCACGCTGACCATTGAGGAGTTCCATTCTAAGCTCCAAGAGGCCACCAACTTCCCTCTGC
GTCCATTCGTCATTCCCTTCCTGAAGGCAAACCTGCCCTTGCTGCAGAGGGAACTCCTGCACTG
CGCCCGCCTGGCCAAGCAGACCCCTGCCCAGTACCTGGCCCAGCACGAGCAGCTCCTGCTGGAT
GCCAACGCCTCCTCCCCCATCGACTCCTCGGAGCTCCTCCTGGAAGTCAACGAGAACGGCAAAA
GGAGGACACCTGACAGGACCAAAGAGAACGGGTCAGACCGTGACCCACTGCACCCCGACCACCT
CAGCAAACGGCCCTGTACCCTGAGCCCCGCGCAGCGCTACAGCCCCAGCAATGGGCTGCCCCAC
CCCACGCCACCGCCACACTACCGGCTGGAAGACATAGCCATGGCCCACCACCTCCGTGACACCT
ATCGCCACTCTGACCCCCGGGAGCTGCGGGAGCGCCATCGGCACCTTGCGGTGCACGGGTCCCG
GCAGGAGGAAGTGATCGACCACAGGCTCACGGAGCGGGAGTGGGCCGAGGAGTGGAAGCATCTC
AACAACCTCCTGAACTGTATCATGGACATGGCTGAGAAGACACGGCGGTCACTCACGGTTCTGC
GCCAGTGCCAGGAGGCCGACCGTGAGGAGCTTAACCACTGGATCCGGCGCTACAGTGACACGGA
GGATGCCAAGAAGGGCCCCGTACCTGCCACTGCCCGGCCCCTGAACAGCTCCGTGGGTGCAGAG
GGCTCTCAGCTAGACGCCCACCGGGAGTTCATGCCTAGGACCCTCTCCGGCTACATGCCTGAGG
AGATATGGAGGAAGGCTGAAGAGGCGGTGAATGAGGTGAAGCGGCAGGCGATGTCTGAGCTGCA
AAAAGCCGTGTCAGATGCCGAGCGAAAAGCCCACGAGCTCATCAGCACAGAACGTGCCAAGATG
GAGCGGGCCTTGGCTGAAGCCCGGCGGCAGGCCTCAGAGGACGCTCTGACTGTCATCAACCAGC
AGGAGGACTCCAGCGAGAGCTGCTGGAACTGCGGGCGCAAGGCCAGTGAGACGTGCAGTGGCTG
CAACGCGGCGCGCTACTGCGGCTCCTTCTGCCAGCACCGGGACTGGGAGAAGCACCACCATGTG
TGTGGCCAGAGCCTGCAGGGCCCCGCGGCCGCCGTGGCCGACCCGGGGCCTGCACAGCCCGACG
CCACGGCCAGCCTGGGCCCCTGCCTGCCCGCAGGAGCCGCCAGCCCCAGCGAGGCCAGCTCCGC
GGGCCCGTCCCGCCCCGGCTCCCCCGGCCCACCTGGGCCCCTGGACGCCGCGCCCCGCTGA

hide sequence

RefSeq Acc Id:

XM_038476881 ⟹ XP_038332809

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	64,727,917 - 64,764,153 (+)	NCBI

RefSeq Acc Id:

XM_038476882 ⟹ XP_038332810

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	64,727,917 - 64,764,153 (+)	NCBI

RefSeq Acc Id:

XM_038476883 ⟹ XP_038332811

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	64,678,376 - 64,764,153 (+)	NCBI

RefSeq Acc Id:

XM_038476884 ⟹ XP_038332812

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	64,678,376 - 64,764,153 (+)	NCBI

RefSeq Acc Id:

XM_038476885 ⟹ XP_038332813

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	64,727,920 - 64,764,153 (+)	NCBI

RefSeq Acc Id:

XM_038476886 ⟹ XP_038332814

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	64,732,870 - 64,764,153 (+)	NCBI

RefSeq Acc Id:

XM_038476887 ⟹ XP_038332815

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	64,710,090 - 64,764,153 (+)	NCBI

RefSeq Acc Id:

XM_038476888 ⟹ XP_038332816

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UMICH_Zoey_3.1	5	64,709,314 - 64,764,153 (+)	NCBI

RefSeq Acc Id:

XM_038525189 ⟹ XP_038381117

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	5	64,493,093 - 64,529,331 (+)	NCBI

RefSeq Acc Id:

XM_038525197 ⟹ XP_038381125

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	5	64,493,093 - 64,529,331 (+)	NCBI

RefSeq Acc Id:

XM_038525208 ⟹ XP_038381136

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	5	64,443,579 - 64,529,331 (+)	NCBI

RefSeq Acc Id:

XM_038525227 ⟹ XP_038381155

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	5	64,493,096 - 64,529,331 (+)	NCBI

RefSeq Acc Id:

XM_038525256 ⟹ XP_038381184

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
Dog10K_Boxer_Tasha	5	64,474,516 - 64,529,331 (+)	NCBI

RefSeq Acc Id:

XM_038538042 ⟹ XP_038393970

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	64,965,420 - 65,001,888 (+)	NCBI

RefSeq Acc Id:

XM_038538043 ⟹ XP_038393971

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	64,965,420 - 65,001,888 (+)	NCBI

RefSeq Acc Id:

XM_038538044 ⟹ XP_038393972

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	64,915,902 - 65,001,888 (+)	NCBI

RefSeq Acc Id:

XM_038538045 ⟹ XP_038393973

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	64,915,902 - 65,001,888 (+)	NCBI

RefSeq Acc Id:

XM_038538046 ⟹ XP_038393974

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	64,965,423 - 65,001,888 (+)	NCBI

RefSeq Acc Id:

XM_038538047 ⟹ XP_038393975

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	64,970,373 - 65,001,888 (+)	NCBI

RefSeq Acc Id:

XM_038538048 ⟹ XP_038393976

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	64,947,592 - 65,001,888 (+)	NCBI

RefSeq Acc Id:

XM_038538049 ⟹ XP_038393977

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UU_Cfam_GSD_1.0	5	64,946,840 - 65,001,888 (+)	NCBI

RefSeq Acc Id:

XM_038602913 ⟹ XP_038458841

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
UNSW_CanFamBas_1.0	5	64,510,060 - 64,595,977 (+)	NCBI

RefSeq Acc Id:

XM_038666782 ⟹ XP_038522710

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	64,701,773 - 64,738,015 (+)	NCBI

RefSeq Acc Id:

XM_038666783 ⟹ XP_038522711

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	64,701,773 - 64,738,015 (+)	NCBI

RefSeq Acc Id:

XM_038666784 ⟹ XP_038522712

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	64,652,241 - 64,738,015 (+)	NCBI

RefSeq Acc Id:

XM_038666785 ⟹ XP_038522713

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	64,652,241 - 64,738,015 (+)	NCBI

RefSeq Acc Id:

XM_038666786 ⟹ XP_038522714

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	64,701,776 - 64,738,015 (+)	NCBI

RefSeq Acc Id:

XM_038666787 ⟹ XP_038522715

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	64,706,726 - 64,738,015 (+)	NCBI

RefSeq Acc Id:

XM_038666788 ⟹ XP_038522716

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	64,683,946 - 64,738,015 (+)	NCBI

RefSeq Acc Id:

XM_038666789 ⟹ XP_038522717

Type:

CODING

Position:

Dog Assembly	Chr	Position (strand)	Source
ROS_Cfam_1.0	5	64,683,178 - 64,738,015 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_005620622	(Get FASTA)	NCBI Sequence Viewer
	XP_005620626	(Get FASTA)	NCBI Sequence Viewer
	XP_022274793	(Get FASTA)	NCBI Sequence Viewer
	XP_038332809	(Get FASTA)	NCBI Sequence Viewer
	XP_038332810	(Get FASTA)	NCBI Sequence Viewer
	XP_038332811	(Get FASTA)	NCBI Sequence Viewer
	XP_038332812	(Get FASTA)	NCBI Sequence Viewer
	XP_038332813	(Get FASTA)	NCBI Sequence Viewer
	XP_038332814	(Get FASTA)	NCBI Sequence Viewer
	XP_038332815	(Get FASTA)	NCBI Sequence Viewer
	XP_038332816	(Get FASTA)	NCBI Sequence Viewer
	XP_038381117	(Get FASTA)	NCBI Sequence Viewer
	XP_038381125	(Get FASTA)	NCBI Sequence Viewer
	XP_038381136	(Get FASTA)	NCBI Sequence Viewer
	XP_038381155	(Get FASTA)	NCBI Sequence Viewer
	XP_038381184	(Get FASTA)	NCBI Sequence Viewer
	XP_038393970	(Get FASTA)	NCBI Sequence Viewer
	XP_038393971	(Get FASTA)	NCBI Sequence Viewer
	XP_038393972	(Get FASTA)	NCBI Sequence Viewer
	XP_038393973	(Get FASTA)	NCBI Sequence Viewer
	XP_038393974	(Get FASTA)	NCBI Sequence Viewer
	XP_038393975	(Get FASTA)	NCBI Sequence Viewer
	XP_038393976	(Get FASTA)	NCBI Sequence Viewer
	XP_038393977	(Get FASTA)	NCBI Sequence Viewer
	XP_038458841	(Get FASTA)	NCBI Sequence Viewer
	XP_038522710	(Get FASTA)	NCBI Sequence Viewer
	XP_038522711	(Get FASTA)	NCBI Sequence Viewer
	XP_038522712	(Get FASTA)	NCBI Sequence Viewer
	XP_038522713	(Get FASTA)	NCBI Sequence Viewer
	XP_038522714	(Get FASTA)	NCBI Sequence Viewer
	XP_038522715	(Get FASTA)	NCBI Sequence Viewer
	XP_038522716	(Get FASTA)	NCBI Sequence Viewer
	XP_038522717	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSCAFP00000029410.6
	ENSCAFP00000042761.2
	ENSCAFP00000056584.2
	ENSCAFP00030022540.1
	ENSCAFP00030022637.1
	ENSCAFP00040014691.1
	ENSCAFP00040014745.1
	ENSCAFP00040014826.1
	ENSCAFP00845004117
	ENSCAFP00845004117.1
	ENSCAFP00845004135
	ENSCAFP00845004135.1
	ENSCAFP00845004149
	ENSCAFP00845004149.1

RefSeq Acc Id:	XP_005620622 ⟸ XM_005620565
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I3MNK6 (UniProtKB/TrEMBL), A0A8P0SW92 (UniProtKB/TrEMBL), A0A8C0NBP4 (UniProtKB/TrEMBL)
- Sequence:	show sequence MSRASPLLDSRLPASTSGSVPRGPRKGGPVDRTDKTATMPDSPAEVKTQPRSTPPGMPPPPPAA SQGATRLPSFTPHTNGEDGPTMSLPHGRFHGCLKWSMVCLLMNGSHSPTAVNGAPSMPSGFSNG PATSSTASLSTQHLPPACGARQLSKLKRFLTTLQQFGSDISPEIGERVRTLVLGLVNSTLTIEE FHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARLAKQTPAQYLAQHEQLLLDANASSPID SSELLLEVNENGKRRTPDRTKENGSDRDPLHPDHLSKRPCTLSPAQRYSPSNGLPHPTPPPHYR LEDIAMAHHLRDTYRHSDPRELRERHRHLAVHGSRQEEVIDHRLTEREWAEEWKHLNNLLNCIM DMAEKTRRSLTVLRQCQEADREELNHWIRRYSDTEDAKKGPVPATARPLNSSVGAEGSQLDAHR EFMPRTLSGYMPEEIWRKAEEAVNEVKRQAMSELQKAVSDAERKAHELISTERAKMERALAEAR RQASEDALTVINQQEDSSESCWNCGRKASETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGP AAAVADPGPAQPDATASLGPCLPAGAASPSEASSAGPSRPGSPGPPGPLDAAPR hide sequence

RefSeq Acc Id:	XP_005620626 ⟸ XM_005620569
- Peptide Label:	isoform X7
- UniProtKB:	A0A8C0JVC4 (UniProtKB/TrEMBL), A0A8I3RSJ1 (UniProtKB/TrEMBL), A0A8P0SP00 (UniProtKB/TrEMBL)
- Sequence:	show sequence MPDSPAEVKTQPRSTPPGMPPPPPAASQGATRLPSFTPHTNGEDGPTMSLPHGRFHGCLKWSMV CLLMNGSHSPTAVNGAPSMPSGFSNGPATSSTASLSTQHLPPACGARQLSKLKRFLTTLQQFGS DISPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQRELLHCARL AKQTPAQYLAQHEQLLLDANASSPIDSSELLLEVNENGKRRTPDRTKENGSDRDPLHPDHLSKR PCTLSPAQRYSPSNGLPHPTPPPHYRLEDIAMAHHLRDTYRHSDPRELRERHRHLAVHGSRQEE VIDHRLTEREWAEEWKHLNNLLNCIMDMAEKTRRSLTVLRQCQEADREELNHWIRRYSDTEDAK KGPVPATARPLNSSVGAEGSQLDAHREFMPRTLSGYMPEEIWRKAEEAVNEVKRQAMSELQKAV SDAERKAHELISTERAKMERALAEARRQASEDALTVINQQEDSSESCWNCGRKASETCSGCNAA RYCGSFCQHRDWEKHHHVCGQSLQGPAAAVADPGPAQPDATASLGPCLPAGAASPSEASSAGPS RPGSPGPPGPLDAAPR hide sequence

RefSeq Acc Id:	XP_022274793 ⟸ XM_022419085
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I3RSJ1 (UniProtKB/TrEMBL), A0A8P0SP00 (UniProtKB/TrEMBL)
- Sequence:	show sequence MDRTDKTATMPDSPAEVKTQPRSTPPGMPPPPPAASQGATRLPSFTPHTNGEDGPTMSLPHGRF HGCLKWSMVCLLMNGSHSPTAVNGAPSMPSGFSNGPATSSTASLSTQHLPPACGARQLSKLKRF LTTLQQFGSDISPEIGERVRTLVLGLVNSTLTIEEFHSKLQEATNFPLRPFVIPFLKANLPLLQ RELLHCARLAKQTPAQYLAQHEQLLLDANASSPIDSSELLLEVNENGKRRTPDRTKENGSDRDP LHPDHLSKRPCTLSPAQRYSPSNGLPHPTPPPHYRLEDIAMAHHLRDTYRHSDPRELRERHRHL AVHGSRQEEVIDHRLTEREWAEEWKHLNNLLNCIMDMAEKTRRSLTVLRQCQEADREELNHWIR RYSDTEDAKKGPVPATARPLNSSVGAEGSQLDAHREFMPRTLSGYMPEEIWRKAEEAVNEVKRQ AMSELQKAVSDAERKAHELISTERAKMERALAEARRQASEDALTVINQQEDSSESCWNCGRKAS ETCSGCNAARYCGSFCQHRDWEKHHHVCGQSLQGPAAAVADPGPAQPDATASLGPCLPAGAASP SEASSAGPSRPGSPGPPGPLDAAPR hide sequence

Ensembl Acc Id:

ENSCAFP00000056584 ⟸ ENSCAFT00000064348

Ensembl Acc Id:

ENSCAFP00000042761 ⟸ ENSCAFT00000049796

Ensembl Acc Id:

ENSCAFP00000054010 ⟸ ENSCAFT00000066937

Ensembl Acc Id:

ENSCAFP00000029410 ⟸ ENSCAFT00000031590

Ensembl Acc Id:

ENSCAFP00000045885 ⟸ ENSCAFT00000079958

Ensembl Acc Id:

ENSCAFP00000065354 ⟸ ENSCAFT00000090835

RefSeq Acc Id:	XP_038332811 ⟸ XM_038476883
- Peptide Label:	isoform X3

RefSeq Acc Id:	XP_038332812 ⟸ XM_038476884
- Peptide Label:	isoform X4

RefSeq Acc Id:	XP_038332816 ⟸ XM_038476888
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038332815 ⟸ XM_038476887
- Peptide Label:	isoform X7

RefSeq Acc Id:	XP_038332809 ⟸ XM_038476881
- Peptide Label:	isoform X1

RefSeq Acc Id:	XP_038332810 ⟸ XM_038476882
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_038332813 ⟸ XM_038476885
- Peptide Label:	isoform X5

RefSeq Acc Id:	XP_038332814 ⟸ XM_038476886
- Peptide Label:	isoform X6

RefSeq Acc Id:	XP_038458841 ⟸ XM_038602913
- Peptide Label:	isoform X8

RefSeq Acc Id:	XP_038522712 ⟸ XM_038666784
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0NBP4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038522713 ⟸ XM_038666785
- Peptide Label:	isoform X4
- UniProtKB:	A0A8I3MNK6 (UniProtKB/TrEMBL), A0A8P0SW92 (UniProtKB/TrEMBL), A0A8C0NBP4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038522717 ⟸ XM_038666789
- Peptide Label:	isoform X7
- UniProtKB:	A0A8C0JVC4 (UniProtKB/TrEMBL), A0A8I3RSJ1 (UniProtKB/TrEMBL), A0A8P0SP00 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038522716 ⟸ XM_038666788
- Peptide Label:	isoform X7
- UniProtKB:	A0A8C0JVC4 (UniProtKB/TrEMBL), A0A8I3RSJ1 (UniProtKB/TrEMBL), A0A8P0SP00 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038522710 ⟸ XM_038666782
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3RSJ1 (UniProtKB/TrEMBL), A0A8P0SP00 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038522711 ⟸ XM_038666783
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3RSJ1 (UniProtKB/TrEMBL), A0A8P0SP00 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038522714 ⟸ XM_038666786
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I3RSJ1 (UniProtKB/TrEMBL), A0A8P0SP00 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038522715 ⟸ XM_038666787
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I3RSJ1 (UniProtKB/TrEMBL), A0A8P0SP00 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038381136 ⟸ XM_038525208
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0NBP4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038381184 ⟸ XM_038525256
- Peptide Label:	isoform X7
- UniProtKB:	A0A8C0JVC4 (UniProtKB/TrEMBL), A0A8I3RSJ1 (UniProtKB/TrEMBL), A0A8P0SP00 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038381117 ⟸ XM_038525189
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3RSJ1 (UniProtKB/TrEMBL), A0A8P0SP00 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038381125 ⟸ XM_038525197
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3RSJ1 (UniProtKB/TrEMBL), A0A8P0SP00 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038381155 ⟸ XM_038525227
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I3RSJ1 (UniProtKB/TrEMBL), A0A8P0SP00 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038393972 ⟸ XM_038538044
- Peptide Label:	isoform X3
- UniProtKB:	A0A8C0NBP4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038393973 ⟸ XM_038538045
- Peptide Label:	isoform X4
- UniProtKB:	A0A8C0NBP4 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038393977 ⟸ XM_038538049
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I3RSJ1 (UniProtKB/TrEMBL), A0A8P0SP00 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038393976 ⟸ XM_038538048
- Peptide Label:	isoform X7
- UniProtKB:	A0A8I3RSJ1 (UniProtKB/TrEMBL), A0A8P0SP00 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038393970 ⟸ XM_038538042
- Peptide Label:	isoform X1
- UniProtKB:	A0A8I3RSJ1 (UniProtKB/TrEMBL), A0A8P0SP00 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038393971 ⟸ XM_038538043
- Peptide Label:	isoform X2
- UniProtKB:	A0A8I3RSJ1 (UniProtKB/TrEMBL), A0A8P0SP00 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038393974 ⟸ XM_038538046
- Peptide Label:	isoform X5
- UniProtKB:	A0A8I3RSJ1 (UniProtKB/TrEMBL), A0A8P0SP00 (UniProtKB/TrEMBL)

RefSeq Acc Id:	XP_038393975 ⟸ XM_038538047
- Peptide Label:	isoform X6
- UniProtKB:	A0A8I3RSJ1 (UniProtKB/TrEMBL), A0A8P0SP00 (UniProtKB/TrEMBL)

Ensembl Acc Id:

ENSCAFP00845004117 ⟸ ENSCAFT00845005184

Ensembl Acc Id:

ENSCAFP00845004149 ⟸ ENSCAFT00845005221

Ensembl Acc Id:

ENSCAFP00845004135 ⟸ ENSCAFT00845005204

Protein Domains

MYND-type TAFH

Promoters

RGD ID:

13683398

Promoter ID:

EPDNEW_C1463

Type:

single initiation site

Name:

CBFA2T3_1

Description:

CBFA2/RUNX1 translocation partner 3

SO ACC ID:

SO:0000170

Source:

EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)

Experiment Methods:

Single-end sequencing.

Position:

Dog Assembly	Chr	Position (strand)	Source
CanFam3.1	5	64,497,158 - 64,497,218	EPDNEW

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSCAFG00000019852	Ensembl, UniProtKB/TrEMBL
	ENSCAFG00030013846	UniProtKB/TrEMBL
	ENSCAFG00040009069	UniProtKB/TrEMBL
	ENSCAFG00845002914	Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript	ENSCAFT00000031590.7	UniProtKB/TrEMBL
	ENSCAFT00000049796.3	UniProtKB/TrEMBL
	ENSCAFT00000064348.2	UniProtKB/TrEMBL
	ENSCAFT00030025808.1	UniProtKB/TrEMBL
	ENSCAFT00030025916.1	UniProtKB/TrEMBL
	ENSCAFT00040016944.1	UniProtKB/TrEMBL
	ENSCAFT00040017014.1	UniProtKB/TrEMBL
	ENSCAFT00040017101.1	UniProtKB/TrEMBL
	ENSCAFT00845005184	ENTREZGENE
	ENSCAFT00845005184.1	UniProtKB/TrEMBL
	ENSCAFT00845005204	ENTREZGENE
	ENSCAFT00845005204.1	UniProtKB/TrEMBL
	ENSCAFT00845005221	ENTREZGENE
	ENSCAFT00845005221.1	UniProtKB/TrEMBL
Gene3D-CATH	1.20.120.1110	UniProtKB/TrEMBL
	6.10.140.2220	UniProtKB/TrEMBL
	6.10.250.230	UniProtKB/TrEMBL
InterPro	CBFA2T1/2/3	UniProtKB/TrEMBL
	CBFA2T3	UniProtKB/TrEMBL
	NHR2	UniProtKB/TrEMBL
	TAFH/NHR1_dom_sf	UniProtKB/TrEMBL
	TAFH_NHR1	UniProtKB/TrEMBL
	Znf_MYND	UniProtKB/TrEMBL
KEGG Report	cfa:489660	UniProtKB/TrEMBL
NCBI Gene	CBFA2T3	ENTREZGENE
PANTHER	PROTEIN CBFA2T3	UniProtKB/TrEMBL
	PTHR10379	UniProtKB/TrEMBL
Pfam	NHR2	UniProtKB/TrEMBL
	TAFH	UniProtKB/TrEMBL
	zf-MYND	UniProtKB/TrEMBL
PRINTS	ETOFAMILY	UniProtKB/TrEMBL
	MTG16PROTEIN	UniProtKB/TrEMBL
PROSITE	TAFH	UniProtKB/TrEMBL
	ZF_MYND_1	UniProtKB/TrEMBL
	ZF_MYND_2	UniProtKB/TrEMBL
SMART	TAFH	UniProtKB/TrEMBL
Superfamily-SCOP	HIT/MYND zinc finger-like	UniProtKB/TrEMBL
	SSF158553	UniProtKB/TrEMBL
UniProt	A0A8C0JVC4	ENTREZGENE
	A0A8C0NBP4	ENTREZGENE, UniProtKB/TrEMBL
	A0A8C0NF73_CANLF	UniProtKB/TrEMBL
	A0A8C0S247_CANLF	UniProtKB/TrEMBL
	A0A8C0S262_CANLF	UniProtKB/TrEMBL
	A0A8C0YS50_CANLF	UniProtKB/TrEMBL
	A0A8I3MNK6	ENTREZGENE, UniProtKB/TrEMBL
	A0A8I3N3P6_CANLF	UniProtKB/TrEMBL
	A0A8I3RSJ1	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0P5U2_CANLF	UniProtKB/TrEMBL
	A0A8P0SP00	ENTREZGENE, UniProtKB/TrEMBL
	A0A8P0SW92	ENTREZGENE, UniProtKB/TrEMBL
VGNC ID	VGNC:56007	ENTREZGENE

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2019-08-06	CBFA2T3	CBFA2/RUNX1 partner transcriptional co-repressor 3	CBFA2T3	CBFA2/RUNX1 translocation partner 3	Symbol and/or name change	5135510	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar