ANAPC1 (anaphase promoting complex subunit 1) - Rat Genome Database

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Gene: ANAPC1 (anaphase promoting complex subunit 1) Pan paniscus
Analyze
Symbol: ANAPC1
Name: anaphase promoting complex subunit 1
RGD ID: 12040369
Description: INVOLVED IN protein K11-linked ubiquitination (ortholog); ASSOCIATED WITH genetic disease (ortholog); High Myopia (ortholog); Rothmund-Thomson Syndrome Type 1 (ortholog); FOUND IN anaphase-promoting complex (ortholog); nucleus (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: anaphase-promoting complex subunit 1; LOC117979226
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21216,192,975 - 16,311,055 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A16,194,907 - 16,313,892 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A90,143,737 - 90,262,215 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A112,983,873 - 113,036,429 (-)NCBIpanpan1.1PanPan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ANAPC1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21216,192,975 - 16,311,055 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan12A16,194,907 - 16,313,892 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v02A90,143,737 - 90,262,215 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.12A112,983,873 - 113,036,429 (-)NCBIpanpan1.1PanPan1.1panPan2
ANAPC1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh382111,766,231 - 111,884,193 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl2111,611,639 - 111,884,690 (-)EnsemblGRCh38hg38GRCh38
GRCh372112,525,217 - 112,641,770 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 362112,243,109 - 112,358,212 (-)NCBINCBI36Build 36hg18NCBI36
Build 342112,242,872 - 112,357,972NCBI
Celera2106,403,649 - 106,465,406 (+)NCBICelera
Cytogenetic Map2q13NCBI
HuRef2105,096,022 - 105,155,075 (-)NCBIHuRef
CHM1_12112,530,036 - 112,646,728 (-)NCBICHM1_1
T2T-CHM13v2.02112,191,142 - 112,310,602 (-)NCBIT2T-CHM13v2.0
Anapc1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm392128,452,003 - 128,529,558 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl2128,452,024 - 128,529,311 (-)EnsemblGRCm39 Ensembl
GRCm382128,610,083 - 128,687,406 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl2128,610,104 - 128,687,391 (-)EnsemblGRCm38mm10GRCm38
MGSCv372128,435,819 - 128,513,131 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv362128,304,145 - 128,378,821 (-)NCBIMGSCv36mm8
Celera2129,840,854 - 129,918,028 (-)NCBICelera
Cytogenetic Map2F1NCBI
cM Map262.63NCBI
Anapc1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr83136,303,350 - 136,383,464 (-)NCBIGRCr8
mRatBN7.23115,850,117 - 115,930,259 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl3115,850,185 - 115,930,273 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx3119,747,340 - 119,827,141 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.03128,342,890 - 128,422,697 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.03126,003,396 - 126,083,193 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.03121,147,484 - 121,226,125 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl3121,147,547 - 121,226,125 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.03128,786,183 - 128,864,679 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.43116,212,111 - 116,299,282 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.13116,120,249 - 116,203,526 (-)NCBI
Celera3114,679,748 - 114,759,543 (-)NCBICelera
Cytogenetic Map3q36NCBI
Anapc1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554702,183,766 - 2,262,900 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554702,182,163 - 2,262,804 (+)NCBIChiLan1.0ChiLan1.0
ANAPC1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11736,210,026 - 36,313,785 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1736,198,631 - 36,312,442 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1735,980,284 - 36,083,761 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01736,988,225 - 37,088,308 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1736,988,257 - 37,088,316 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11736,104,805 - 36,208,349 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01736,176,899 - 36,280,433 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01736,389,150 - 36,492,743 (-)NCBIUU_Cfam_GSD_1.0
Anapc1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440629281,614,798 - 81,672,714 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936783511,713 - 590,187 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936783509,287 - 591,153 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANAPC1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl344,509,680 - 44,605,014 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1344,483,961 - 44,605,035 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2346,249,472 - 46,326,362 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ANAPC1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11414,841,351 - 14,958,734 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1414,841,197 - 14,958,743 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660804,732,844 - 4,851,660 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Anapc1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_004624749460,699 - 569,545 (+)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_004624749458,670 - 570,799 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence


Reference Sequences
RefSeq Acc Id: XM_034953559   ⟹   XP_034809450
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21216,192,975 - 16,311,055 (+)NCBI
NHGRI_mPanPan12A16,195,866 - 16,313,892 (+)NCBI
Mhudiblu_PPA_v02A90,143,738 - 90,262,215 (+)NCBI
RefSeq Acc Id: XM_034953560   ⟹   XP_034809451
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21216,192,975 - 16,311,055 (+)NCBI
NHGRI_mPanPan12A16,195,866 - 16,313,892 (+)NCBI
Mhudiblu_PPA_v02A90,144,232 - 90,260,788 (+)NCBI
RefSeq Acc Id: XM_034953562   ⟹   XP_034809453
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21216,197,899 - 16,311,055 (+)NCBI
NHGRI_mPanPan12A16,200,663 - 16,313,892 (+)NCBI
Mhudiblu_PPA_v02A90,149,009 - 90,262,215 (+)NCBI
RefSeq Acc Id: XM_055107420   ⟹   XP_054963395
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21216,202,447 - 16,311,055 (+)NCBI
NHGRI_mPanPan12A16,205,206 - 16,313,892 (+)NCBI
RefSeq Acc Id: XM_055107421   ⟹   XP_054963396
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21216,196,575 - 16,311,055 (+)NCBI
NHGRI_mPanPan12A16,199,339 - 16,313,892 (+)NCBI
Reference Protein Sequences
RefSeq Acc Id: XP_034809450   ⟸   XM_034953559
- Peptide Label: isoform X1
RefSeq Acc Id: XP_034809451   ⟸   XM_034953560
- Peptide Label: isoform X2
RefSeq Acc Id: XP_034809453   ⟸   XM_034953562
- Peptide Label: isoform X5
RefSeq Acc Id: XP_054963396   ⟸   XM_055107421
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054963395   ⟸   XM_055107420
- Peptide Label: isoform X3


Additional Information

Database Acc Id Source(s)
NCBI Gene ANAPC1 ENTREZGENE


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-04-20 ANAPC1  anaphase promoting complex subunit 1  LOC117979226  anaphase-promoting complex subunit 1  Data merged from RGD:32728629 737654 PROVISIONAL