ARRDC3 (arrestin domain containing 3) - Rat Genome Database

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Gene: ARRDC3 (arrestin domain containing 3) Pan paniscus
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Symbol: ARRDC3
Name: arrestin domain containing 3
RGD ID: 12040267
Description: ENCODES a protein that exhibits beta-3 adrenergic receptor binding (inferred); INVOLVED IN fat pad development (ortholog); heat generation (ortholog); negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway (ortholog); ASSOCIATED WITH Breast Neoplasms (ortholog); familial adenomatous polyposis 1 (ortholog); Hereditary Neoplastic Syndromes (ortholog); FOUND IN cytoplasm (inferred); early endosome (inferred); endosome (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: arrestin domain-containing protein 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2424,016,183 - 24,030,776 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1522,169,817 - 22,184,396 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0523,991,325 - 24,005,913 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1524,126,407 - 24,140,858 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl524,126,427 - 24,140,858 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
ARRDC3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2424,016,183 - 24,030,776 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1522,169,817 - 22,184,396 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0523,991,325 - 24,005,913 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1524,126,407 - 24,140,858 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl524,126,427 - 24,140,858 (+)Ensemblpanpan1.1panPan2
ARRDC3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38591,368,631 - 91,383,317 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl591,368,631 - 91,383,317 (-)EnsemblGRCh38hg38GRCh38
GRCh37590,664,448 - 90,679,134 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36590,700,297 - 90,714,877 (-)NCBINCBI36Build 36hg18NCBI36
Build 34590,700,297 - 90,714,877NCBI
Celera586,566,595 - 86,581,203 (-)NCBICelera
Cytogenetic Map5q14.3NCBI
HuRef585,876,398 - 85,891,271 (-)NCBIHuRef
CHM1_1590,097,255 - 90,111,863 (-)NCBICHM1_1
T2T-CHM13v2.0591,852,479 - 91,867,169 (-)NCBIT2T-CHM13v2.0
Arrdc3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391381,031,508 - 81,044,161 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1381,031,503 - 81,044,161 (+)EnsemblGRCm39 Ensembl
GRCm381380,883,384 - 80,896,042 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1380,883,384 - 80,896,042 (+)EnsemblGRCm38mm10GRCm38
MGSCv371381,022,683 - 81,035,303 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361381,347,107 - 81,359,733 (+)NCBIMGSCv36mm8
Celera1383,148,553 - 83,161,173 (+)NCBICelera
Cytogenetic Map13C2NCBI
cM Map1341.95NCBI
Arrdc3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8212,873,202 - 12,885,716 (+)NCBIGRCr8
mRatBN7.2211,137,464 - 11,149,978 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl211,137,460 - 11,149,978 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx218,258,314 - 18,268,034 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0216,357,917 - 16,367,640 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0210,989,854 - 10,999,566 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.028,732,907 - 8,745,445 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl28,732,932 - 8,743,069 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.028,617,733 - 8,630,270 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera27,507,150 - 7,516,860 (+)NCBICelera
Cytogenetic Map2q11NCBI
Arrdc3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541820,538,983 - 20,548,862 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541820,538,858 - 20,550,876 (+)NCBIChiLan1.0ChiLan1.0
ARRDC3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1317,691,631 - 17,705,507 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl317,691,961 - 17,703,308 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha319,060,400 - 19,074,268 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0317,596,484 - 17,610,370 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl317,596,591 - 17,610,370 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1317,567,848 - 17,581,735 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0317,537,838 - 17,551,679 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0317,822,875 - 17,836,765 (+)NCBIUU_Cfam_GSD_1.0
Arrdc3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213173,248,294 - 173,261,323 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364699,364,347 - 9,377,501 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049364699,364,291 - 9,377,504 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARRDC3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl298,430,465 - 98,444,647 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1298,430,451 - 98,444,835 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22101,569,570 - 101,583,907 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ARRDC3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1485,286,243 - 85,301,208 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl485,286,173 - 85,301,202 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604934,348,931 - 34,363,917 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Arrdc3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474310,333,693 - 10,346,272 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474310,334,114 - 10,346,030 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000046008   ⟹   ENSPPAP00000023186
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl524,126,427 - 24,140,858 (+)Ensembl
RefSeq Acc Id: XM_003822771   ⟹   XP_003822819
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2424,016,183 - 24,030,776 (+)NCBI
NHGRI_mPanPan1522,169,817 - 22,184,396 (+)NCBI
Mhudiblu_PPA_v0523,991,325 - 24,005,913 (+)NCBI
PanPan1.1524,126,407 - 24,140,858 (+)NCBI
Sequence:
RefSeq Acc Id: XM_024928832   ⟹   XP_024784600
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2424,016,700 - 24,030,776 (+)NCBI
NHGRI_mPanPan1522,170,314 - 22,184,396 (+)NCBI
Mhudiblu_PPA_v0523,991,326 - 24,005,913 (+)NCBI
PanPan1.1524,126,407 - 24,140,858 (+)NCBI
Sequence:
RefSeq Acc Id: XM_055112208   ⟹   XP_054968183
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2424,018,630 - 24,030,776 (+)NCBI
NHGRI_mPanPan1522,172,250 - 22,184,396 (+)NCBI
Protein Sequences
Protein RefSeqs XP_003822819 (Get FASTA)   NCBI Sequence Viewer  
  XP_024784600 (Get FASTA)   NCBI Sequence Viewer  
  XP_054968183 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000023186
  ENSPPAP00000023186.1
RefSeq Acc Id: XP_003822819   ⟸   XM_003822771
- Peptide Label: isoform X1
- UniProtKB: A0A2R9B0Y9 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_024784600   ⟸   XM_024928832
- Peptide Label: isoform X2
- Sequence:
Ensembl Acc Id: ENSPPAP00000023186   ⟸   ENSPPAT00000046008
RefSeq Acc Id: XP_054968183   ⟸   XM_055112208
- Peptide Label: isoform X2
Protein Domains
Arrestin C-terminal-like


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000034772 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000046008.1 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.640 UniProtKB/TrEMBL
InterPro Arrestin-like_C UniProtKB/TrEMBL
  Arrestin-like_N UniProtKB/TrEMBL
  Arrestin_C-like UniProtKB/TrEMBL
  Arrestin_domain-protein UniProtKB/TrEMBL
  Ig_E-set UniProtKB/TrEMBL
KEGG Report pps:100970135 UniProtKB/TrEMBL
NCBI Gene ARRDC3 ENTREZGENE
PANTHER ARRESTIN DOMAIN CONTAINING PROTEIN UniProtKB/TrEMBL
  ARRESTIN DOMAIN-CONTAINING PROTEIN 3 UniProtKB/TrEMBL
Pfam Arrestin_C UniProtKB/TrEMBL
  Arrestin_N UniProtKB/TrEMBL
SMART Arrestin_C UniProtKB/TrEMBL
Superfamily-SCOP SSF81296 UniProtKB/TrEMBL
UniProt A0A2R9B0Y9 ENTREZGENE, UniProtKB/TrEMBL