Arrdc3 (arrestin domain containing 3) - Rat Genome Database

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Gene: Arrdc3 (arrestin domain containing 3) Mus musculus
Analyze
Symbol: Arrdc3
Name: arrestin domain containing 3
RGD ID: 1550271
MGI Page MGI
Description: Predicted to enable beta-3 adrenergic receptor binding activity. Involved in negative regulation of cold-induced thermogenesis. Acts upstream of or within several processes, including fat pad development; negative regulation of adenylate cyclase-activating adrenergic receptor signaling pathway; and negative regulation of locomotion involved in locomotory behavior. Predicted to be located in lysosome and membrane. Predicted to be active in endosome and plasma membrane. Is expressed in central nervous system; liver; lung; olfactory epithelium; and retina nuclear layer. Orthologous to human ARRDC3 (arrestin domain containing 3).
Type: protein-coding
RefSeq Status: VALIDATED
Previously known as: AI450344; arrestin domain-containing protein 3; MGC107410; mKIAA1376
RGD Orthologs
Human
Rat
Chinchilla
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Genes
More Info more info ...
Latest Assembly: GRCm39 - Mouse Genome Assembly GRCm39
Position:
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391381,031,503 - 81,044,161 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1381,031,503 - 81,044,161 (+)EnsemblGRCm39 Ensembl
GRCm381380,883,384 - 80,896,042 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1380,883,384 - 80,896,042 (+)EnsemblGRCm38mm10GRCm38
MGSCv371381,022,683 - 81,035,303 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361381,347,107 - 81,359,733 (+)NCBIMGSCv36mm8
Celera1383,148,553 - 83,161,173 (+)NCBICelera
Cytogenetic Map13C2NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene-Chemical Interaction Annotations     Click to see Annotation Detail View
(+)-schisandrin B  (ISO)
(-)-demecolcine  (ISO)
(-)-epigallocatechin 3-gallate  (ISO)
1,2-dimethylhydrazine  (EXP)
1-naphthyl isothiocyanate  (ISO)
17beta-estradiol  (ISO)
2,3,7,8-tetrachlorodibenzodioxine  (EXP,ISO)
2,4-diaminotoluene  (EXP)
2-methylcholine  (ISO)
3,3',5-triiodo-L-thyronine  (ISO)
3,4-methylenedioxymethamphetamine  (EXP)
4-hydroxynon-2-enal  (EXP)
6-propyl-2-thiouracil  (ISO)
7,12-dimethyltetraphene  (EXP)
acetamide  (ISO)
acrylamide  (ISO)
aflatoxin B1  (EXP,ISO)
all-trans-retinoic acid  (ISO)
amosite asbestos  (ISO)
amphetamine  (ISO)
ampicillin  (ISO)
aristolochic acid  (ISO)
arsenous acid  (ISO)
benzo[a]pyrene  (EXP,ISO)
bis(2-ethylhexyl) phthalate  (EXP)
bisphenol A  (ISO)
bromobenzene  (ISO)
cadmium sulfate  (EXP)
calcitriol  (ISO)
cannabidiol  (ISO)
carbamazepine  (ISO)
carbon nanotube  (EXP)
chloroprene  (EXP)
chlorpyrifos  (EXP)
chromium atom  (ISO)
chromium(6+)  (ISO)
cisplatin  (ISO)
cobalt dichloride  (ISO)
copper atom  (EXP)
copper(0)  (EXP)
coumestrol  (ISO)
crocidolite asbestos  (EXP)
Cuprizon  (ISO)
cyclosporin A  (EXP,ISO)
diarsenic trioxide  (ISO)
diazinon  (ISO)
dichloroacetic acid  (EXP)
diclofenac  (EXP)
dioxygen  (ISO)
diuron  (ISO)
doxorubicin  (ISO)
endosulfan  (ISO)
epoxiconazole  (EXP)
ethanol  (EXP,ISO)
ethyl methanesulfonate  (ISO)
folic acid  (EXP,ISO)
formaldehyde  (ISO)
gentamycin  (ISO)
glycidol  (ISO)
indole-3-methanol  (ISO)
indometacin  (ISO)
iron atom  (ISO)
iron(0)  (ISO)
isoprenaline  (EXP)
leflunomide  (ISO)
lipopolysaccharide  (EXP)
metformin  (ISO)
methyl methanesulfonate  (ISO)
methylisothiazolinone  (ISO)
mono(2-ethylhexyl) phthalate  (ISO)
N-acetyl-L-cysteine  (ISO)
N-nitrosodiethylamine  (ISO)
ochratoxin A  (ISO)
paracetamol  (EXP,ISO)
perfluorononanoic acid  (ISO)
perfluorooctane-1-sulfonic acid  (ISO)
phenobarbital  (EXP)
phenylephrine  (ISO)
pirinixic acid  (EXP)
potassium chromate  (ISO)
pravastatin  (EXP,ISO)
prednisolone  (ISO)
pregnenolone 16alpha-carbonitrile  (EXP)
propiconazole  (EXP)
quercetin  (ISO)
quinolin-8-ol  (ISO)
resorcinol  (ISO)
rotenone  (ISO)
sodium arsenate  (EXP)
sulindac  (ISO)
Tesaglitazar  (ISO)
testosterone  (ISO)
tetrachloromethane  (EXP,ISO)
thimerosal  (ISO)
thioacetamide  (ISO)
titanium dioxide  (EXP)
trichloroethene  (ISO)
triptonide  (EXP)
tris(2-butoxyethyl) phosphate  (ISO)
troglitazone  (EXP)
urethane  (ISO)
valproic acid  (ISO)
vanadyl sulfate  (ISO)
vinclozolin  (ISO)
zaragozic acid A  (EXP,ISO)
zoledronic acid  (ISO)

References

References - curated
# Reference Title Reference Citation
1. Prediction of the coding sequences of mouse homologues of KIAA gene: II. The complete nucleotide sequences of 400 mouse KIAA-homologous cDNAs identified by screening of terminal sequences of cDNA clones randomly sampled from size-fractionated libraries. Okazaki N, etal., DNA Res 2003 Feb 28;10(1):35-48.
2. Analysis of the mouse transcriptome based on functional annotation of 60,770 full-length cDNAs. Okazaki Y, etal., Nature. 2002 Dec 5;420(6915):563-73.
3. Mouse MP Annotation Import Pipeline RGD automated import pipeline
4. Data Import for Chemical-Gene Interactions RGD automated import pipeline for gene-chemical interactions
Additional References at PubMed
PMID:8889548   PMID:10349636   PMID:10922068   PMID:11042159   PMID:11076861   PMID:11217851   PMID:12477932   PMID:12520002   PMID:12904583   PMID:14610273   PMID:15226823   PMID:15489334  
PMID:16141072   PMID:16141073   PMID:16766796   PMID:17967808   PMID:18799693   PMID:19605364   PMID:21677750   PMID:21873635   PMID:21909369   PMID:21982743   PMID:23236378   PMID:23375831  
PMID:28291835   PMID:29688375   PMID:31002587   PMID:32156724   PMID:32634127   PMID:32756918  


Genomics

Comparative Map Data
Arrdc3
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391381,031,503 - 81,044,161 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1381,031,503 - 81,044,161 (+)EnsemblGRCm39 Ensembl
GRCm381380,883,384 - 80,896,042 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1380,883,384 - 80,896,042 (+)EnsemblGRCm38mm10GRCm38
MGSCv371381,022,683 - 81,035,303 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361381,347,107 - 81,359,733 (+)NCBIMGSCv36mm8
Celera1383,148,553 - 83,161,173 (+)NCBICelera
Cytogenetic Map13C2NCBI
ARRDC3
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38591,368,631 - 91,383,317 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p13 Ensembl591,368,631 - 91,383,317 (-)EnsemblGRCh38hg38GRCh38
GRCh37590,664,448 - 90,679,134 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36590,700,297 - 90,714,877 (-)NCBINCBI36Build 36hg18NCBI36
Build 34590,700,297 - 90,714,877NCBI
Celera586,566,595 - 86,581,203 (-)NCBICelera
Cytogenetic Map5q14.3NCBI
HuRef585,876,398 - 85,891,271 (-)NCBIHuRef
CHM1_1590,097,255 - 90,111,863 (-)NCBICHM1_1
T2T-CHM13v2.0591,852,479 - 91,867,169 (-)NCBIT2T-CHM13v2.0
Arrdc3
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mRatBN7.2211,137,443 - 11,149,978 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl211,137,460 - 11,149,978 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx218,258,314 - 18,268,034 (+)NCBIRnor_SHR
UTH_Rnor_SHRSP_BbbUtx_1.0216,357,917 - 16,367,640 (+)NCBIRnor_SHRSP
UTH_Rnor_WKY_Bbb_1.0210,989,854 - 10,999,566 (+)NCBIRnor_WKY
Rnor_6.028,732,907 - 8,745,445 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl28,732,932 - 8,743,069 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.028,617,733 - 8,630,270 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera27,507,150 - 7,516,860 (+)NCBICelera
Cytogenetic Map2q11NCBI
Arrdc3
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541820,538,983 - 20,548,862 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495541820,538,858 - 20,550,876 (+)NCBIChiLan1.0ChiLan1.0
ARRDC3
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
PanPan1.1524,126,407 - 24,140,858 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl524,126,427 - 24,140,858 (+)Ensemblpanpan1.1panPan2
Mhudiblu_PPA_v0523,991,325 - 24,005,913 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
ARRDC3
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1317,691,631 - 17,705,507 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl317,691,961 - 17,703,308 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha319,060,400 - 19,074,268 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0317,596,484 - 17,610,370 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl317,596,591 - 17,610,370 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1317,567,848 - 17,581,735 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0317,537,838 - 17,551,679 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0317,822,875 - 17,836,765 (+)NCBIUU_Cfam_GSD_1.0
Arrdc3
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024407213173,248,294 - 173,261,323 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049364699,364,347 - 9,377,501 (-)EnsemblSpeTri2.0
SpeTri2.0NW_0049364699,364,291 - 9,377,504 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ARRDC3
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl298,430,465 - 98,444,647 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1298,430,451 - 98,444,835 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.22101,569,570 - 101,583,907 (-)NCBISscrofa10.2Sscrofa10.2susScr3
ARRDC3
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1485,286,243 - 85,301,208 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl485,286,173 - 85,301,202 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604934,348,931 - 34,363,917 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Arrdc3
(Heterocephalus glaber - naked mole-rat)
Naked Mole-rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462474310,333,693 - 10,346,272 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462474310,334,114 - 10,346,030 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

miRNA Target Status

Predicted Target Of
Summary Value
Count of predictions:2074
Count of miRNA genes:588
Interacting mature miRNAs:705
Transcripts:ENSMUST00000099356, ENSMUST00000159090, ENSMUST00000159690, ENSMUST00000159856, ENSMUST00000161441, ENSMUST00000162904
Prediction methods:Miranda, Rnahybrid, Targetscan
Result types:miRGate_prediction

The detailed report is available here: Full Report CSV TAB Printer

miRNA Target Status data imported from miRGate (http://mirgate.bioinfo.cnio.es/).
For more information about miRGate, see PMID:25858286 or access the full paper here.


QTLs in Region (GRCm39)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
4142147Mvwf4_mmodifier of von Willebrand factor 4 (mouse)Not determined20477612112898424Mouse
10412235Scgq5_mspontaneous crescentic glomerulonephritis QTL 5 (mouse)Not determined133606090896239162Mouse
4142331Bxs6_mBXSB/MpJ autoimmune nephritis 6 (mouse)Not determined4521044283744746Mouse
10412109Bxs7_mBXSB/MpJ autoimmune nephritis 7 (mouse)Not determined134521044283744746Mouse
4142372Moo2_mmodifier of Odc2 (mouse)Not determinedX5031841184318559Mouse
1301666Eae13_msusceptibility to experimental allergic encephalomyelitis 13 (mouse)Not determined135031841184318559Mouse
1300573Elsgp2_melevated serum gp70 2 (mouse)Not determined135061682884617027Mouse
14746975Manh74_mmandible shape 74 (mouse)135247726986477269Mouse
1302073Pgct1_mprimordial germ cell tumor locus 1 (mouse)Not determined135382078387820897Mouse
1357563Bmch6_mbone mechanical trait 6 (mouse)Not determined135538498089385140Mouse
4142314Tailaq3_mtail length adjusted QTL 3 (mouse)Not determined55720354112431103Mouse
4140959W10q17_mweight 10 weeks QTL 17 (mouse)Not determined55720354112431103Mouse
4141992W6q16_mweight 6 weeks QTL 16 (mouse)Not determined55720354112431103Mouse
4142241Tailq3_mtail length QTL 3 (mouse)Not determined55720354112431103Mouse
10402414Sgp5_mserum gp70 production 5 (mouse)Not determined1356470456105422186Mouse
1357553Cia28_mcollagen induced arthritis 28 (mouse)Not determined135662924996239162Mouse
10412163Wra1_mwheel running activity 1 (mouse)Not determined135913260093132738Mouse
1300941Skl6_mskeletal size (tail length) 6 (mouse)Not determined136425082198250945Mouse
1301949Skull20_mskull morphology 20 (mouse)Not determined136425082198250945Mouse
1301445Listr2_mlisteriosis resistance 2 (mouse)Not determined1366744601100744746Mouse
1301593Heal8_mwound healing/regeneration 8 (mouse)Not determined1368053999102054119Mouse
14696726Kidrq3_mkidney weight, right QTL 3 (mouse)1368217066102217066Mouse
14747007Mancz11_mmandible centroid size 11 (mouse)1370111284104111284Mouse
4141266Mol3_mmodifier of LPS-response 3 (mouse)Not determined76132600112431103Mouse
1301610Dps1_mdelta power in slow-wave sleep 1 (mouse)Not determined137719586295730894Mouse
12880414V125Dq10_mvitamin D active form serum level QTL 10 (mouse)1378036508112036508Mouse
12880402Emlq1_memotional learning QTL 1 (mouse)137810885896866553Mouse
12879495Fexq1_mfear expression QTL 1 (mouse)137826885895836553Mouse
10043997Bw40_mbody weight QTL 40 (mouse)Not determined1479239045113239162Mouse
10045623Heal18_mwound healing regeneration 18 (mouse)Not determined1379239045113239162Mouse

Markers in Region
AI450344  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381380,895,584 - 80,895,780UniSTSGRCm38
MGSCv371381,034,845 - 81,035,041UniSTSGRCm37
Celera1383,160,715 - 83,160,911UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2H2UniSTS
cM Map293.0UniSTS
Whitehead/MRC_RH13704.29UniSTS
UniSTS:237065  
Mouse AssemblyChrPosition (strand)SourceJBrowse
GRCm381380,885,054 - 80,885,246UniSTSGRCm38
MGSCv371381,024,315 - 81,024,507UniSTSGRCm37
Celera1383,150,185 - 83,150,377UniSTS
Cytogenetic Map13C3UniSTS
Cytogenetic Map2H2UniSTS
cM Map293.0UniSTS


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts NM_001042591 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_153410 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  NR_153411 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_006517017 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247081 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_030247082 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide AC119818 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK084951 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK088288 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK122499 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  AK163364 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC023838 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC031125 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC044762 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC054844 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  BC098474 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CH466563 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  CT009711 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  DQ861994 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSMUST00000099356   ⟹   ENSMUSP00000096957
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1381,031,529 - 81,044,161 (+)Ensembl
GRCm38.p6 Ensembl1380,883,410 - 80,896,042 (+)Ensembl
RefSeq Acc Id: ENSMUST00000159090
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1381,031,503 - 81,037,762 (+)Ensembl
GRCm38.p6 Ensembl1380,883,384 - 80,889,643 (+)Ensembl
RefSeq Acc Id: ENSMUST00000159690   ⟹   ENSMUSP00000124418
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1381,031,529 - 81,044,154 (+)Ensembl
GRCm38.p6 Ensembl1380,883,410 - 80,896,035 (+)Ensembl
RefSeq Acc Id: ENSMUST00000159856
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1381,038,223 - 81,039,371 (+)Ensembl
GRCm38.p6 Ensembl1380,890,104 - 80,891,252 (+)Ensembl
RefSeq Acc Id: ENSMUST00000161441   ⟹   ENSMUSP00000125455
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1381,034,214 - 81,042,439 (+)Ensembl
GRCm38.p6 Ensembl1380,886,095 - 80,894,320 (+)Ensembl
RefSeq Acc Id: ENSMUST00000162904
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm39 Ensembl1381,038,637 - 81,039,761 (+)Ensembl
GRCm38.p6 Ensembl1380,890,518 - 80,891,642 (+)Ensembl
RefSeq Acc Id: NM_001042591   ⟹   NP_001036056
RefSeq Status: VALIDATED
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391381,031,541 - 81,044,161 (+)NCBI
GRCm381380,883,422 - 80,896,042 (+)NCBI
MGSCv371381,022,683 - 81,035,303 (+)RGD
Celera1383,148,553 - 83,161,173 (+)RGD
cM Map13 ENTREZGENE
Sequence:
RefSeq Acc Id: NR_153410
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391381,031,503 - 81,044,161 (+)NCBI
GRCm381380,883,384 - 80,896,042 (+)NCBI
Sequence:
RefSeq Acc Id: NR_153411
RefSeq Status: VALIDATED
Type: NON-CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391381,034,214 - 81,044,161 (+)NCBI
GRCm381380,886,095 - 80,896,042 (+)NCBI
Sequence:
RefSeq Acc Id: XM_006517017   ⟹   XP_006517080
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391381,034,274 - 81,044,161 (+)NCBI
GRCm381380,886,155 - 80,896,042 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030247081   ⟹   XP_030102941
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391381,033,788 - 81,044,161 (+)NCBI
GRCm381380,885,669 - 80,896,042 (+)NCBI
Sequence:
RefSeq Acc Id: XM_030247082   ⟹   XP_030102942
RefSeq Status:
Type: CODING
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm391381,031,508 - 81,044,161 (+)NCBI
GRCm381380,883,389 - 80,896,042 (+)NCBI
Sequence:
Reference Sequences
RefSeq Acc Id: NP_001036056   ⟸   NM_001042591
- UniProtKB: Q8K0L7 (UniProtKB/Swiss-Prot),   Q7TPQ9 (UniProtKB/Swiss-Prot)
- Sequence:
RefSeq Acc Id: XP_006517080   ⟸   XM_006517017
- Peptide Label: isoform X1
- Sequence:
RefSeq Acc Id: XP_030102942   ⟸   XM_030247082
- Peptide Label: isoform X2
- UniProtKB: E0CZE1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_030102941   ⟸   XM_030247081
- Peptide Label: isoform X2
- UniProtKB: E0CZE1 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSMUSP00000124418   ⟸   ENSMUST00000159690
RefSeq Acc Id: ENSMUSP00000096957   ⟸   ENSMUST00000099356
RefSeq Acc Id: ENSMUSP00000125455   ⟸   ENSMUST00000161441
Protein Domains
Arrestin_C

Protein Structures
Name Modeler Protein Id AA Range Protein Structure
AF-Q7TPQ9-F1-model_v2 AlphaFold Q7TPQ9 1-414 view protein structure

Promoters
RGD ID:8680892
Promoter ID:EPDNEW_M18477
Type:multiple initiation site
Name:Arrdc3_1
Description:Mus musculus arrestin domain containing 3 , transcript variant2, non-coding RNA.
SO ACC ID:SO:0000170
Source:EPDNEW (Eukaryotic Promoter Database, http://epd.vital-it.ch/)
Experiment Methods:Single-end sequencing.
Position:
Mouse AssemblyChrPosition (strand)Source
GRCm381380,883,412 - 80,883,472EPDNEW
RGD ID:6824154
Promoter ID:MM_KWN:14777
Type:CpG-Island
SO ACC ID:SO:0000170
Source:MPROMDB
Tissues & Cell Lines:3T3L1_Day0,   3T3L1_Day1,   3T3L1_Day2,   3T3L1_Day3,   3T3L1_Day4,   3T3L1_Day6,   BoneMarrow_0Hour,   BoneMarrow_2Hour,   BoneMarrow_4Hour,   Brain,   ES_Cell,   Kidney,   Liver,   Lung,   MEF_B4,   MEF_B6,   Spleen
Transcripts:ENSMUST00000099356,   UC007RHH.1,   UC007RHJ.1
Position:
Mouse AssemblyChrPosition (strand)Source
MGSCv361381,021,926 - 81,022,777 (+)MPROMDB

Additional Information

Database Acc Id Source(s)
AGR Gene MGI:2145242 AgrOrtholog
Ensembl Genes ENSMUSG00000074794 Ensembl, ENTREZGENE, UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Ensembl Protein ENSMUSP00000096957 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUSP00000124418.2 UniProtKB/TrEMBL
  ENSMUSP00000125455 ENTREZGENE
  ENSMUSP00000125455.2 UniProtKB/TrEMBL
Ensembl Transcript ENSMUST00000099356 ENTREZGENE, UniProtKB/Swiss-Prot
  ENSMUST00000159690 ENTREZGENE
  ENSMUST00000159690.8 UniProtKB/TrEMBL
  ENSMUST00000161441 ENTREZGENE
  ENSMUST00000161441.2 UniProtKB/TrEMBL
Gene3D-CATH 2.60.40.640 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
InterPro Arrestin-like_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Arrestin_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Arrestin_C-like UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Ig_E-set UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
KEGG Report mmu:105171 UniProtKB/Swiss-Prot
MGD MGI:2145242 ENTREZGENE
NCBI Gene 105171 ENTREZGENE
Pfam Arrestin_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
  Arrestin_N UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
PhenoGen Arrdc3 PhenoGen
SMART Arrestin_C UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
Superfamily-SCOP SSF81296 UniProtKB/Swiss-Prot, UniProtKB/TrEMBL
UniProt ARRD3_MOUSE UniProtKB/Swiss-Prot
  E0CY84_MOUSE UniProtKB/TrEMBL
  E0CZE1 ENTREZGENE, UniProtKB/TrEMBL
  Q0GJK3_MOUSE UniProtKB/TrEMBL
  Q7TPQ9 ENTREZGENE
  Q8K0L7 ENTREZGENE
UniProt Secondary Q4KMN0 UniProtKB/Swiss-Prot
  Q80TE6 UniProtKB/Swiss-Prot
  Q8K0L7 UniProtKB/Swiss-Prot