NCAPG (non-SMC condensin I complex subunit G) - Rat Genome Database

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Gene: NCAPG (non-SMC condensin I complex subunit G) Pan paniscus
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Symbol: NCAPG
Name: non-SMC condensin I complex subunit G
RGD ID: 11925082
Description: INVOLVED IN cell division (inferred); chromosome condensation (inferred); mitotic chromosome condensation (inferred); ASSOCIATED WITH COVID-19 (ortholog); Disease Progression (ortholog); Endometrial Neoplasms (ortholog); FOUND IN chromosome (inferred); condensed chromosome (inferred); condensed chromosome, centromeric region (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: condensin complex subunit 3
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2318,074,246 - 18,119,605 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1418,272,263 - 18,314,517 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0412,232,614 - 12,265,320 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1417,527,055 - 17,561,038 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl417,524,826 - 17,571,798 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
NCAPG
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2318,074,246 - 18,119,605 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1418,272,263 - 18,314,517 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0412,232,614 - 12,265,320 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1417,527,055 - 17,561,038 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl417,524,826 - 17,571,798 (+)Ensemblpanpan1.1panPan2
NCAPG
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38417,810,979 - 17,844,865 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl417,810,979 - 17,844,865 (+)EnsemblGRCh38hg38GRCh38
GRCh37417,812,602 - 17,846,488 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 36417,421,623 - 17,455,586 (+)NCBINCBI36Build 36hg18NCBI36
Celera418,277,506 - 18,311,469 (+)NCBICelera
Cytogenetic Map4p15.31NCBI
HuRef417,167,187 - 17,201,238 (+)NCBIHuRef
CHM1_1417,810,377 - 17,844,429 (+)NCBICHM1_1
T2T-CHM13v2.0417,793,327 - 17,827,212 (+)NCBIT2T-CHM13v2.0
Ncapg
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39545,827,212 - 45,858,491 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl545,827,261 - 45,857,888 (+)EnsemblGRCm39 Ensembl
GRCm38545,669,891 - 45,700,547 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl545,669,919 - 45,700,546 (+)EnsemblGRCm38mm10GRCm38
MGSCv37546,061,164 - 46,091,786 (+)NCBIGRCm37MGSCv37mm9NCBIm37
Celera543,092,590 - 43,123,298 (+)NCBICelera
Cytogenetic Map5B3NCBI
cM Map525.23NCBI
Ncapg
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr81469,616,473 - 69,645,445 (-)NCBIGRCr8
mRatBN7.21465,403,930 - 65,432,902 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl1465,404,163 - 65,432,902 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx1469,776,769 - 69,804,027 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.01471,083,969 - 71,112,941 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.01467,487,169 - 67,514,423 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.01469,898,268 - 69,927,885 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl1469,899,128 - 69,927,938 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.01469,941,502 - 69,970,627 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.41470,465,952 - 70,494,296 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
Celera1464,386,930 - 64,415,898 (-)NCBICelera
Cytogenetic Map14q11NCBI
Ncapg
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554806,399,960 - 6,430,645 (-)EnsemblChiLan1.0
ChiLan1.0NW_0049554806,399,891 - 6,430,617 (-)NCBIChiLan1.0ChiLan1.0
NCAPG
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1391,279,800 - 91,322,679 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl391,281,077 - 91,322,803 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha393,745,415 - 93,788,076 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0392,276,176 - 92,319,082 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl392,276,185 - 92,319,196 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1391,449,153 - 91,492,044 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0391,502,487 - 91,545,387 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0391,886,702 - 91,929,596 (-)NCBIUU_Cfam_GSD_1.0
Ncapg
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440528556,706,655 - 56,743,580 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493647710,405,997 - 10,445,206 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493647710,408,347 - 10,445,361 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NCAPG
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl812,759,641 - 12,807,163 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1812,759,225 - 12,807,164 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2812,560,111 - 12,603,284 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NCAPG
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12732,380,722 - 32,413,659 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2732,377,575 - 32,413,494 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604779,106,789 - 79,140,324 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ncapg
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462475514,068,009 - 14,100,438 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462475514,067,931 - 14,100,593 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000032352   ⟹   ENSPPAP00000009709
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl417,524,826 - 17,559,592 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000032356   ⟹   ENSPPAP00000009713
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl417,527,055 - 17,560,273 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000032357   ⟹   ENSPPAP00000009714
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl417,527,320 - 17,571,798 (+)Ensembl
RefSeq Acc Id: XM_008952160   ⟹   XP_008950408
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v2318,074,246 - 18,119,605 (+)NCBI
NHGRI_mPanPan1418,272,263 - 18,314,517 (+)NCBI
Mhudiblu_PPA_v0412,232,614 - 12,265,320 (+)NCBI
PanPan1.1417,527,055 - 17,560,273 (+)NCBI
Sequence:
Protein Sequences
Protein RefSeqs XP_008950408 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000009709.1
  ENSPPAP00000009713.1
  ENSPPAP00000009714.1
RefSeq Acc Id: XP_008950408   ⟸   XM_008952160
- UniProtKB: A0A2R9A1B9 (UniProtKB/TrEMBL)
- Sequence:
Ensembl Acc Id: ENSPPAP00000009714   ⟸   ENSPPAT00000032357
Ensembl Acc Id: ENSPPAP00000009713   ⟸   ENSPPAT00000032356
Ensembl Acc Id: ENSPPAP00000009709   ⟸   ENSPPAT00000032352
Protein Domains
Nuclear condensin complex subunit 3 C-terminal


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000028077 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000032352.1 UniProtKB/TrEMBL
  ENSPPAT00000032356.1 UniProtKB/TrEMBL
  ENSPPAT00000032357.1 UniProtKB/TrEMBL
Gene3D-CATH 1.25.10.10 UniProtKB/TrEMBL
InterPro ARM-like UniProtKB/TrEMBL
  ARM-type_fold UniProtKB/TrEMBL
  CND3 UniProtKB/TrEMBL
  Cnd3_C UniProtKB/TrEMBL
KEGG Report pps:100982166 UniProtKB/TrEMBL
NCBI Gene NCAPG ENTREZGENE
PANTHER CONDENSIN COMPLEX SUBUNIT 3 UniProtKB/TrEMBL
  PTHR14418 UniProtKB/TrEMBL
Pfam Cnd3 UniProtKB/TrEMBL
Superfamily-SCOP SSF48371 UniProtKB/TrEMBL
UniProt A0A2R9A1B9 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9A351_PANPA UniProtKB/TrEMBL
  A0A2R9A357_PANPA UniProtKB/TrEMBL