TAAR2 (trace amine associated receptor 2) - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Gene: TAAR2 (trace amine associated receptor 2) Pan paniscus
Analyze
Symbol: TAAR2
Name: trace amine associated receptor 2
RGD ID: 11856656
Description: ENCODES a pseudogene that exhibits G protein-coupled receptor activity (inferred); trace-amine receptor activity (inferred); INVOLVED IN G protein-coupled receptor signaling pathway (inferred); FOUND IN membrane (inferred); plasma membrane (inferred)
Type: pseudo (Ensembl: protein-coding)
RefSeq Status: INFERRED
Previously known as: TAAR2P
RGD Orthologs
Human
Mouse
Rat
Dog
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25152,599,973 - 152,600,967 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16150,507,054 - 150,508,048 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06130,393,716 - 130,394,710 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16134,501,267 - 134,502,261 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6134,501,267 - 134,508,387 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
TAAR2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v25152,599,973 - 152,600,967 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan16150,507,054 - 150,508,048 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v06130,393,716 - 130,394,710 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.16134,501,267 - 134,502,261 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl6134,501,267 - 134,508,387 (-)Ensemblpanpan1.1panPan2
TAAR2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh386132,617,150 - 132,624,275 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl6132,617,022 - 132,624,275 (-)EnsemblGRCh38hg38GRCh38
GRCh376132,938,289 - 132,945,414 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 366132,979,982 - 132,987,107 (-)NCBINCBI36Build 36hg18NCBI36
Celera6133,685,125 - 133,692,251 (-)NCBICelera
Cytogenetic Map6q23.2NCBI
HuRef6130,513,205 - 130,520,335 (-)NCBIHuRef
CHM1_16133,201,961 - 133,209,075 (-)NCBICHM1_1
T2T-CHM13v2.06133,812,108 - 133,819,243 (-)NCBIT2T-CHM13v2.0
Taar2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm391023,814,470 - 23,817,481 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl1023,814,470 - 23,817,481 (+)EnsemblGRCm39 Ensembl
GRCm381023,938,572 - 23,941,583 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl1023,938,572 - 23,941,583 (+)EnsemblGRCm38mm10GRCm38
MGSCv371023,658,378 - 23,661,389 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv361023,627,988 - 23,630,999 (+)NCBIMGSCv36mm8
Celera1024,872,067 - 24,875,079 (+)NCBICelera
Cytogenetic Map10A4NCBI
cM Map1011.4NCBI
Taar2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8123,319,526 - 23,323,495 (-)NCBIGRCr8
mRatBN7.2121,500,290 - 21,504,259 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl121,500,067 - 21,504,299 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx121,277,273 - 21,281,245 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0127,277,318 - 27,281,290 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0121,476,907 - 21,480,882 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0122,578,025 - 22,581,994 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl122,578,025 - 22,581,994 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0124,052,952 - 24,056,922 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4122,027,912 - 22,031,881 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1122,030,856 - 22,034,826 (-)NCBI
Celera120,243,653 - 20,247,622 (-)NCBICelera
Cytogenetic Map1p12NCBI
LOC100686959
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha126,653,606 - 26,654,633 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0125,577,519 - 25,578,547 (-)NCBIROS_Cfam_1.0
UMICH_Zoey_3.1125,623,590 - 25,624,617 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0125,522,382 - 25,523,409 (-)NCBIUNSW_CanFamBas_1.0
TAAR2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl131,073,654 - 31,074,574 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1131,067,713 - 31,074,574 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2134,587,889 - 34,594,760 (+)NCBISscrofa10.2Sscrofa10.2susScr3
TAAR2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11340,901,944 - 40,929,519 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1340,921,295 - 40,928,506 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604013,110,187 - 13,117,320 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Taar2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_004624952721,912 - 727,169 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000032707   ⟹   ENSPPAP00000010060
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl6134,501,267 - 134,508,387 (-)Ensembl
RefSeq Acc Id: XM_003827664   ⟹   XP_003827712
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.16134,501,267 - 134,508,387 (-)NCBI
Protein Sequences
Ensembl Protein ENSPPAP00000010060.1
RefSeq Acc Id: XP_003827712   ⟸   XM_003827664
- Sequence:
Ensembl Acc Id: ENSPPAP00000010060   ⟸   ENSPPAT00000032707
Protein Domains
G-protein coupled receptors family 1 profile


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000028265 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000032707.1 UniProtKB/TrEMBL
Gene3D-CATH Rhodopsin 7-helix transmembrane proteins UniProtKB/TrEMBL
InterPro GPCR_Rhodpsn UniProtKB/TrEMBL
  GPCR_Rhodpsn_7TM UniProtKB/TrEMBL
  TAAR UniProtKB/TrEMBL
  TAAR_fam UniProtKB/TrEMBL
NCBI Gene TAAR2 ENTREZGENE
PANTHER HISTAMINE RECEPTOR-RELATED G-PROTEIN COUPLED RECEPTOR UniProtKB/TrEMBL
  TRACE AMINE-ASSOCIATED RECEPTOR 2 UniProtKB/TrEMBL
Pfam 7tm_1 UniProtKB/TrEMBL
PRINTS GPCRRHODOPSN UniProtKB/TrEMBL
  TRACEAMINER UniProtKB/TrEMBL
PROSITE G_PROTEIN_RECEP_F1_1 UniProtKB/TrEMBL
  G_PROTEIN_RECEP_F1_2 UniProtKB/TrEMBL
SMART 7TM_GPCR_Srsx UniProtKB/TrEMBL
Superfamily-SCOP Family A G protein-coupled receptor-like UniProtKB/TrEMBL
UniProt A0A2R9A451_PANPA UniProtKB/TrEMBL