ZNF212 (zinc finger protein 212) - Rat Genome Database

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Gene: ZNF212 (zinc finger protein 212) Pan paniscus
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Symbol: ZNF212 (Ensembl: ZNF282)
Name: zinc finger protein 212 (Ensembl:zinc finger protein 282)
RGD ID: 11849075
Description: ENCODES a protein that exhibits DNA-binding transcription activator activity, RNA polymerase II-specific (ortholog); identical protein binding (ortholog); INVOLVED IN dendrite development (ortholog); general adaptation syndrome, behavioral process (ortholog); neuromuscular process controlling balance (ortholog); FOUND IN nucleoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: LOC100968956
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26185,822,077 - 185,838,997 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1737,832,341 - 37,850,819 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07140,966,080 - 140,983,442 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17153,443,128 - 153,459,887 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7153,400,957 - 153,459,887 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ZNF212
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v26185,822,077 - 185,838,997 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan1737,832,341 - 37,850,819 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v07140,966,080 - 140,983,442 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.17153,443,128 - 153,459,887 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl7153,400,957 - 153,459,887 (+)Ensemblpanpan1.1panPan2
ZNF212
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh387149,239,651 - 149,255,606 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl7149,239,651 - 149,255,606 (+)EnsemblGRCh38hg38GRCh38
GRCh377148,936,742 - 148,952,697 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 367148,567,707 - 148,583,630 (+)NCBINCBI36Build 36hg18NCBI36
Build 347148,374,421 - 148,390,334NCBI
Celera7143,605,935 - 143,621,892 (+)NCBICelera
Cytogenetic Map7q36.1NCBI
HuRef7143,013,676 - 143,029,627 (+)NCBIHuRef
CHM1_17148,945,125 - 148,961,093 (+)NCBICHM1_1
T2T-CHM13v2.07150,421,475 - 150,437,430 (+)NCBIT2T-CHM13v2.0
CRA_TCAGchr7v27148,274,750 - 148,290,707 (+)NCBI
Zfp212
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39647,897,502 - 47,909,573 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl647,897,410 - 47,909,573 (+)EnsemblGRCm39 Ensembl
GRCm38647,920,568 - 47,932,639 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl647,920,476 - 47,932,639 (+)EnsemblGRCm38mm10GRCm38
MGSCv37647,870,567 - 47,882,638 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36647,850,281 - 47,862,220 (+)NCBIMGSCv36mm8
Celera648,450,052 - 48,462,120 (+)NCBICelera
Cytogenetic Map6B2.3NCBI
cM Map622.94NCBI
Zfp212
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8478,254,582 - 78,267,017 (+)NCBIGRCr8
mRatBN7.2476,923,638 - 76,936,076 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl476,923,668 - 76,936,066 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx482,135,807 - 82,148,229 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0477,910,144 - 77,922,566 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0476,351,609 - 76,364,031 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0477,591,880 - 77,604,307 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl477,592,016 - 77,603,226 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.04142,261,529 - 142,273,942 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4476,049,699 - 76,062,045 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1476,325,236 - 76,337,100 (+)NCBI
Celera471,871,201 - 71,883,645 (+)NCBICelera
Cytogenetic Map4q24NCBI
Znf212
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554914,488,385 - 4,500,169 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554914,488,012 - 4,498,851 (+)NCBIChiLan1.0ChiLan1.0
ZNF212
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11614,274,287 - 14,289,809 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1614,274,089 - 14,314,094 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1614,883,178 - 14,898,691 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01615,988,752 - 16,004,526 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1615,988,782 - 16,030,280 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11614,369,098 - 14,384,802 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01614,950,248 - 14,965,775 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01615,000,229 - 15,015,749 (+)NCBIUU_Cfam_GSD_1.0
LOC101970925
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_0244051187,567,246 - 7,570,476 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365275,332,773 - 5,338,429 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365275,332,791 - 5,337,376 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF212
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1855,528,138 - 55,541,841 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11855,528,144 - 55,541,859 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21860,791,344 - 60,805,045 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF212
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.121117,796,951 - 117,813,818 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Vero_WHO_p1.0NW_02366607213,748,249 - 13,764,846 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Znf212
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248006,531,021 - 6,535,529 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248006,531,016 - 6,541,659 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XM_008973950   ⟹   XP_008972198
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26185,822,077 - 185,838,997 (+)NCBI
NHGRI_mPanPan1737,832,341 - 37,850,816 (+)NCBI
Mhudiblu_PPA_v07140,966,088 - 140,983,442 (+)NCBI
PanPan1.17153,443,162 - 153,459,887 (+)NCBI
Sequence:
RefSeq Acc Id: XM_055115507   ⟹   XP_054971482
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26185,822,308 - 185,838,997 (+)NCBI
NHGRI_mPanPan1737,832,573 - 37,850,819 (+)NCBI
RefSeq Acc Id: XM_055115508   ⟹   XP_054971483
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26185,828,335 - 185,838,997 (+)NCBI
NHGRI_mPanPan1737,832,590 - 37,850,818 (+)NCBI
RefSeq Acc Id: XM_063606134   ⟹   XP_063462204
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26185,822,308 - 185,838,997 (+)NCBI
RefSeq Acc Id: XM_063606135   ⟹   XP_063462205
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v26185,822,308 - 185,838,997 (+)NCBI
RefSeq Acc Id: XP_008972198   ⟸   XM_008973950
- Peptide Label: isoform X3
- UniProtKB: A0A2R9CAE0 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_054971482   ⟸   XM_055115507
- Peptide Label: isoform X4
RefSeq Acc Id: XP_054971483   ⟸   XM_055115508
- Peptide Label: isoform X5
RefSeq Acc Id: XP_063462204   ⟸   XM_063606134
- Peptide Label: isoform X1
RefSeq Acc Id: XP_063462205   ⟸   XM_063606135
- Peptide Label: isoform X2
Protein Domains
C2H2-type   KRAB


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000042171 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000061827.1 UniProtKB/TrEMBL
  ENSPPAT00000061831.1 UniProtKB/TrEMBL
  ENSPPAT00000061834.1 UniProtKB/TrEMBL
  ENSPPAT00000061836.1 UniProtKB/TrEMBL
  ENSPPAT00000061840.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/TrEMBL
InterPro KRAB UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/TrEMBL
  Krueppel_C2H2_ZnF UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
KEGG Report pps:100968956 UniProtKB/TrEMBL
NCBI Gene ZNF212 ENTREZGENE
PANTHER KRAB DOMAIN C2H2 ZINC FINGER UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 282 UniProtKB/TrEMBL
  ZINC FINGER PROTEIN 746-RELATED UniProtKB/TrEMBL
Pfam KRAB UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/TrEMBL
  zf-C2H2_6 UniProtKB/TrEMBL
PROSITE KRAB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART KRAB UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF109640 UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
UniProt A0A2R9CAE0 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9CAH6_PANPA UniProtKB/TrEMBL
  A0A2R9CD43_PANPA UniProtKB/TrEMBL
  A0A2R9CL86_PANPA UniProtKB/TrEMBL
  A0A2R9CL91_PANPA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2023-05-02 ZNF212  zinc finger protein 212  LOC100968956  zinc finger protein 212  Symbol and/or name change 5135510 APPROVED
2020-07-01 LOC100968956  zinc finger protein 212  ZNF212  zinc finger protein 212  Symbol and/or name change 5135510 APPROVED