B3GNTL1 (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1) - Rat Genome Database

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Gene: B3GNTL1 (UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1) Pan paniscus
Analyze
Symbol: B3GNTL1
Name: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1
RGD ID: 11831052
Description: ENCODES a protein that exhibits tRNA-queuosine(34) galactosyltransferase activity (inferred); INVOLVED IN regulation of translation (inferred); tRNA modification (inferred); FOUND IN cytoplasm (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1; UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21999,496,801 - 99,712,172 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan117104,402,897 - 104,521,594 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01777,370,520 - 77,484,542 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11783,158,832 - 83,259,069 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1783,161,978 - 83,259,068 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model



Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
B3GNTL1Bonoboregulation of translation involved_inIEAUniProtKB:Q67FW5 and ensembl:ENSP00000319979150520179 EnsemblGO_REF:0000107
B3GNTL1BonobotRNA modification involved_inIEAUniProtKB:Q67FW5 and ensembl:ENSP00000319979150520179 EnsemblGO_REF:0000107

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
B3GNTL1Bonobocytoplasm is_active_inISOB3GNTL1 (Homo sapiens)9068941 PMID:37992713UniProtPMID:37992713
B3GNTL1Bonobocytoplasm located_inIEAUniProtKB:Q67FW5 and ensembl:ENSP00000319979150520179 EnsemblGO_REF:0000107

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
B3GNTL1BonobotRNA-queuosine(34) galactosyltransferase activity enablesIEAUniProtKB:Q67FW5 and ensembl:ENSP00000319979150520179 EnsemblGO_REF:0000107



B3GNTL1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21999,496,801 - 99,712,172 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan117104,402,897 - 104,521,594 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01777,370,520 - 77,484,542 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11783,158,832 - 83,259,069 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1783,161,978 - 83,259,068 (-)Ensemblpanpan1.1panPan2
B3GNTL1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381782,942,149 - 83,051,770 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1782,942,149 - 83,051,809 (-)EnsemblGRCh38hg38GRCh38
GRCh371780,900,025 - 81,009,646 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 361778,494,956 - 78,602,975 (-)NCBINCBI36Build 36hg18NCBI36
Celera1777,497,246 - 77,604,381 (-)NCBICelera
Cytogenetic Map17q25.3NCBI
HuRef1776,304,055 - 76,409,838 (-)NCBIHuRef
CHM1_11780,987,743 - 81,095,025 (-)NCBICHM1_1
T2T-CHM13v2.01783,817,341 - 83,941,858 (-)NCBIT2T-CHM13v2.0
B3gntl1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm3911121,507,023 - 121,563,985 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl11121,507,023 - 121,563,979 (-)EnsemblGRCm39 Ensembl
GRCm3811121,616,197 - 121,673,160 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl11121,616,197 - 121,673,153 (-)EnsemblGRCm38mm10GRCm38
MGSCv3711121,477,522 - 121,534,465 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3611121,432,860 - 121,489,229 (-)NCBIMGSCv36mm8
Celera11133,351,975 - 133,408,746 (-)NCBICelera
Cytogenetic Map11E2NCBI
cM Map1186.14NCBI
B3gntl1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr810107,363,036 - 107,431,988 (-)NCBIGRCr8
mRatBN7.210106,870,237 - 106,933,723 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl10106,873,169 - 106,933,637 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx10111,979,620 - 112,038,779 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.010111,442,674 - 111,501,836 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.010106,794,890 - 106,854,038 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.010110,799,409 - 110,863,075 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl10110,800,864 - 110,863,021 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.010110,375,119 - 110,443,597 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
Celera10105,409,692 - 105,468,785 (-)NCBICelera
Cytogenetic Map10q32.3NCBI
B3gntl1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955506165,341 - 272,051 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955506165,383 - 272,051 (+)NCBIChiLan1.0ChiLan1.0
B3GNTL1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Dog10K_Boxer_Tasha9143,880 - 194,012 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.09136,563 - 185,638 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl9136,605 - 185,633 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.19129,797 - 179,906 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.09291,092 - 340,842 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.09366,354 - 416,337 (+)NCBIUU_Cfam_GSD_1.0
B3gntl1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405602167,012 - 201,501 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936923368,516 - 403,663 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936923368,585 - 403,438 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
B3GNTL1
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl12259,916 - 326,417 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.112259,880 - 326,420 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.212411,336 - 478,735 (-)NCBISscrofa10.2Sscrofa10.2susScr3
B3GNTL1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11674,825,280 - 74,964,026 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1674,832,619 - 74,963,981 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607746,511,242 - 46,652,364 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
B3gntl1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462480111,598,732 - 11,682,318 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462480111,595,360 - 11,683,095 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

.





1 to 20 of 20 rows
RefSeq Transcripts XM_034943214 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034943215 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034943216 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034943217 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034943218 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034943219 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034943220 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034943222 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034943224 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055101988 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055101989 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_057300343 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063599514 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063599515 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063599516 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063599517 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063599518 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010110746 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010110747 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000019 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
1 to 20 of 20 rows

Ensembl Acc Id: ENSPPAT00000048592   ⟹   ENSPPAP00000025762
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1783,161,978 - 83,259,068 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000048593   ⟹   ENSPPAP00000025763
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1783,161,978 - 83,209,565 (-)Ensembl
RefSeq Acc Id: XM_034943214   ⟹   XP_034799105
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,498,431 - 99,712,172 (-)NCBI
NHGRI_mPanPan117104,402,897 - 104,521,590 (-)NCBI
Mhudiblu_PPA_v01777,370,520 - 77,484,542 (-)NCBI
RefSeq Acc Id: XM_034943215   ⟹   XP_034799106
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,501,119 - 99,709,325 (-)NCBI
NHGRI_mPanPan117104,406,112 - 104,516,861 (-)NCBI
Mhudiblu_PPA_v01777,374,427 - 77,484,542 (-)NCBI
RefSeq Acc Id: XM_034943216   ⟹   XP_034799107
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,498,744 - 99,709,325 (-)NCBI
NHGRI_mPanPan117104,404,150 - 104,516,861 (-)NCBI
Mhudiblu_PPA_v01777,372,462 - 77,484,542 (-)NCBI
RefSeq Acc Id: XM_034943217   ⟹   XP_034799108
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,496,801 - 99,709,325 (-)NCBI
NHGRI_mPanPan117104,402,897 - 104,516,861 (-)NCBI
Mhudiblu_PPA_v01777,374,118 - 77,484,542 (-)NCBI
RefSeq Acc Id: XM_034943218   ⟹   XP_034799109
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,498,431 - 99,709,325 (-)NCBI
NHGRI_mPanPan117104,402,897 - 104,516,861 (-)NCBI
Mhudiblu_PPA_v01777,372,162 - 77,484,542 (-)NCBI
RefSeq Acc Id: XM_034943219   ⟹   XP_034799110
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,501,119 - 99,709,326 (-)NCBI
NHGRI_mPanPan117104,406,111 - 104,516,861 (-)NCBI
Mhudiblu_PPA_v01777,374,426 - 77,484,542 (-)NCBI
RefSeq Acc Id: XM_034943220   ⟹   XP_034799111
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,501,119 - 99,712,172 (-)NCBI
NHGRI_mPanPan117104,406,112 - 104,521,594 (-)NCBI
Mhudiblu_PPA_v01777,374,427 - 77,484,542 (-)NCBI
RefSeq Acc Id: XM_034943222   ⟹   XP_034799113
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,496,801 - 99,709,259 (-)NCBI
NHGRI_mPanPan117104,402,897 - 104,516,787 (-)NCBI
Mhudiblu_PPA_v01777,374,427 - 77,484,455 (-)NCBI
RefSeq Acc Id: XM_034943224   ⟹   XP_034799115
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,501,119 - 99,692,767 (-)NCBI
NHGRI_mPanPan117104,406,112 - 104,462,624 (-)NCBI
Mhudiblu_PPA_v01777,374,427 - 77,430,505 (-)NCBI
RefSeq Acc Id: XM_055101988   ⟹   XP_054957963
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,496,801 - 99,712,172 (-)NCBI
NHGRI_mPanPan117104,402,897 - 104,521,594 (-)NCBI
RefSeq Acc Id: XM_055101989   ⟹   XP_054957964
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,501,119 - 99,709,327 (-)NCBI
NHGRI_mPanPan117104,406,110 - 104,516,861 (-)NCBI
RefSeq Acc Id: XM_057300343   ⟹   XP_057156326
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,498,431 - 99,709,175 (-)NCBI
NHGRI_mPanPan117104,402,897 - 104,516,256 (-)NCBI
RefSeq Acc Id: XM_063599514   ⟹   XP_063455584
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,496,801 - 99,712,172 (-)NCBI
RefSeq Acc Id: XM_063599515   ⟹   XP_063455585
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,498,744 - 99,709,175 (-)NCBI
RefSeq Acc Id: XM_063599516   ⟹   XP_063455586
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,501,667 - 99,709,326 (-)NCBI
RefSeq Acc Id: XM_063599517   ⟹   XP_063455587
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,496,801 - 99,712,172 (-)NCBI
RefSeq Acc Id: XM_063599518   ⟹   XP_063455588
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,498,431 - 99,712,172 (-)NCBI
RefSeq Acc Id: XR_010110746
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,510,359 - 99,516,326 (-)NCBI
RefSeq Acc Id: XR_010110747
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21999,510,359 - 99,516,326 (-)NCBI
1 to 5 of 19 rows
1 to 5 of 19 rows
RefSeq Acc Id: XP_034799105   ⟸   XM_034943214
- Peptide Label: isoform X1
- UniProtKB: A0A2R9B9J1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034799109   ⟸   XM_034943218
- Peptide Label: isoform X1
- UniProtKB: A0A2R9B9J1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034799107   ⟸   XM_034943216
- Peptide Label: isoform X1
- UniProtKB: A0A2R9B9J1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034799108   ⟸   XM_034943217
- Peptide Label: isoform X1
- UniProtKB: A0A2R9B9J1 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_034799110   ⟸   XM_034943219
- Peptide Label: isoform X4
- UniProtKB: A0A2R9B9J1 (UniProtKB/TrEMBL)
Glycosyltransferase 2-like



1 to 13 of 13 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSPPAG00000036007 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000048592.1 UniProtKB/TrEMBL
  ENSPPAT00000048593.1 UniProtKB/TrEMBL
Gene3D-CATH Spore Coat Polysaccharide Biosynthesis Protein SpsA, Chain A UniProtKB/TrEMBL
InterPro Glyco_trans_2-like UniProtKB/TrEMBL
  Nucleotide-diphossugar_trans UniProtKB/TrEMBL
NCBI Gene B3GNTL1 ENTREZGENE
PANTHER GLYCOSYLTRANSFERASE UniProtKB/TrEMBL
  UDP-GLCNAC:BETAGAL BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE-LIKE PROTEIN 1 UniProtKB/TrEMBL
Pfam Glycos_transf_2 UniProtKB/TrEMBL
Superfamily-SCOP SSF53448 UniProtKB/TrEMBL
UniProt A0A2R9B841_PANPA UniProtKB/TrEMBL
  A0A2R9B9J1 ENTREZGENE, UniProtKB/TrEMBL
1 to 13 of 13 rows


Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-02-24 B3GNTL1  UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase like 1    UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase-like 1  Symbol and/or name change 5135510 APPROVED