Symbol:
MRPL1
Name:
mitochondrial ribosomal protein L1
RGD ID:
11823493
Description:
ENCODES a protein that exhibits RNA binding (inferred); structural constituent of ribosome (inferred); INVOLVED IN translation (inferred); FOUND IN large ribosomal subunit (inferred); mitochondrion (inferred); ribonucleoprotein complex (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
39S ribosomal protein L1, mitochondrial; large ribosomal subunit protein uL1m
RGD Orthologs
Alliance Orthologs
More Info
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More Info
Latest Assembly:
Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 3 52,109,970 - 52,203,131 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 4 52,296,559 - 52,389,512 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 4 46,239,491 - 46,331,917 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 4 52,084,870 - 52,177,179 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 4 52,085,053 - 52,176,796 (-) Ensembl panpan1.1 panPan2
JBrowse:
View Region in Genome Browser (JBrowse)
Model
MRPL1 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 3 52,109,970 - 52,203,131 (-) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 4 52,296,559 - 52,389,512 (-) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 4 46,239,491 - 46,331,917 (-) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 4 52,084,870 - 52,177,179 (-) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 4 52,085,053 - 52,176,796 (-) Ensembl panpan1.1 panPan2
MRPL1 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 4 77,862,830 - 77,952,785 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 4 77,862,830 - 77,952,785 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 4 78,783,984 - 78,873,939 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 4 79,002,829 - 79,092,968 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 4 79,141,079 - 79,231,116 NCBI Celera 4 76,085,074 - 76,174,865 (+) NCBI Celera Cytogenetic Map 4 q21.1 NCBI HuRef 4 74,535,751 - 74,625,006 (+) NCBI HuRef CHM1_1 4 78,760,602 - 78,850,723 (+) NCBI CHM1_1 T2T-CHM13v2.0 4 81,202,852 - 81,293,608 (+) NCBI T2T-CHM13v2.0
Mrpl1 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 5 96,357,357 - 96,414,586 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 5 96,357,352 - 96,414,586 (+) Ensembl GRCm39 Ensembl GRCm38 5 96,209,498 - 96,266,727 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 5 96,209,493 - 96,266,727 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 5 96,639,134 - 96,695,728 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 5 96,450,417 - 96,507,011 (+) NCBI MGSCv36 mm8 Celera 5 93,553,498 - 93,610,078 (+) NCBI Celera Cytogenetic Map 5 E3 NCBI cM Map 5 47.29 NCBI
Mrpl1 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 14 13,604,498 - 13,663,633 (-) NCBI GRCr8 mRatBN7.2 14 13,300,522 - 13,359,654 (-) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 14 13,300,522 - 13,359,721 (-) Ensembl mRatBN7.2 Ensembl UTH_Rnor_SHR_Utx 14 13,267,793 - 13,327,734 (-) NCBI Rnor_SHR UTH_Rnor_SHR_Utx UTH_Rnor_SHRSP_BbbUtx_1.0 14 14,567,648 - 14,627,589 (-) NCBI Rnor_SHRSP UTH_Rnor_SHRSP_BbbUtx_1.0 UTH_Rnor_WKY_Bbb_1.0 14 13,284,132 - 13,344,073 (-) NCBI Rnor_WKY UTH_Rnor_WKY_Bbb_1.0 Rnor_6.0 14 14,951,507 - 15,008,136 (-) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_6.0 Ensembl 14 14,951,495 - 15,008,150 (-) Ensembl Rnor6.0 rn6 Rnor6.0 Rnor_5.0 14 14,893,399 - 14,944,235 (-) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 14 14,813,544 - 14,872,680 (-) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 14 14,813,544 - 14,873,482 (-) NCBI Celera 14 13,347,923 - 13,406,905 (-) NCBI Celera Cytogenetic Map 14 p22 NCBI
Mrpl1 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955433 2,353,844 - 2,437,743 (+) Ensembl ChiLan1.0 ChiLan1.0 NW_004955433 2,327,830 - 2,436,198 (+) NCBI ChiLan1.0 ChiLan1.0
MRPL1 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 32 2,307,485 - 2,457,587 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 CanFam3.1 Ensembl 32 2,363,454 - 2,496,034 (+) Ensembl CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 32 39,434,637 - 39,583,984 (-) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 32 2,333,281 - 2,484,071 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 32 2,333,332 - 2,523,023 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 32 2,332,231 - 2,472,209 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 32 2,280,434 - 2,419,871 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 32 37,752,366 - 37,892,634 (-) NCBI UU_Cfam_GSD_1.0
Mrpl1 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024405285 9,878,695 - 9,958,409 (-) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936676 1,553,406 - 1,627,659 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936676 1,549,018 - 1,628,548 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
MRPL1 (Sus scrofa - pig)
MRPL1 (Chlorocebus sabaeus - green monkey)
Mrpl1 (Heterocephalus glaber - naked mole-rat)
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Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSPPAT00000060143 ⟹ ENSPPAP00000037244
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source PanPan1.1 Ensembl 4 52,085,053 - 52,176,796 (-) Ensembl
RefSeq Acc Id:
XM_003832281 ⟹ XP_003832329
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 3 52,109,970 - 52,203,131 (-) NCBI NHGRI_mPanPan1 4 52,296,559 - 52,389,512 (-) NCBI Mhudiblu_PPA_v0 4 46,239,491 - 46,331,917 (-) NCBI PanPan1.1 4 52,084,870 - 52,177,179 (-) NCBI
Sequence:
CCTGTTTTTCAAGATTTTACGTTGGGTATTAAGTACTCTCACAGCCTGTTAAAATTGTCGCTCTGAGTACACTTGCAGGATCAAAAAAGAAAAAGAGTAAGAAGGAAGGATTAAAATAATCACAGCAT CGCCAACAGGATCGTATTTTCCCGAAGGTGGTTAACCAGCCATACCGGAACCACGAAACACAGGGTCCTGTGCAACACGGAGGACTAACAGTAACACCGCCACGCCGGCAGCAAAGCTCATTTTGGTC CCCGCCCCGTTCCTCTTTCTCTTTTTAACTCCTTCCCTCTTTGCGGATTCTAGAACGGAACCTTTTTTTAATTCTTCCCAGTAGAAACGTAGGAACAATTTCGTGAACGCAATCCGAAGTGCCCAACA TGGCGGCGGCCGTAAGGTGCATGGGTAGAGCCTTGATACATCATCAAAGGCATAGCCTTTCCAAGATGGTTTATCAGACATCACTTTGTTCTTGTTCTGTAAACATCCGAGTGCCCAACAGACATTTT GCTGCTGCTACAAAGTCTGCAAAGAAAACAAAAAAAGGTGCTAAAGAAAAAACACCAGATGAGAAAAAAGATGAAATAGAAAAAATAAAAGCATATCCCTATATGGAAGGCAAACCTGAGGATGATGT CTATTTAAAACGCTTATACCCGAGACAGATATATGAGGTGGAGAAAGCTGTTCACTTACTTAAGAAATTTCAAATTCTTGACTTTACTAGTCCAAAGCAAAGTGTTTATCTTGATTTGACACTGGATA TGGCACTGGGAAAGAAGAAAAACGTGGAGCCATTTACCAGTGTTCTTAGTTTGCCATACCCATTTGCTTCCGAAATCAATAAAGTTGCTGTATTTACAGAGAATGCATCAGAGGTCAAAATAGCGGAA GAAAATGGAGCTGCATTTGCAGGAGGCACTAGTCTGATACAGAAGATTTGGGATGATGAAATTGTTGCAGACTTTTACGTAGCTGTTCCAGAAATAATGCCTGAACTTAATCGATTAAGGAAGAAACT GAATAAAAAATATCCAAAGCTTTCTCGAAATTCCATTGGCCGTGACATCCCCAAAATGCTTGAATTATTTAAAAATGGACATGAAATTAAGGTAGATGAAGAAAGGGAGAACTTTCTCCAGACCAAAA TAGCAACATTGGATATGTCAAGTGACCAGATAGCTGCCAATCTGCAAGCAGTTATTAATGAAGTTTGTAGGCACAGACCGCTGAATTTGGGTCCCTTTGTGGTACGTGCTTTCCTTCGTAGTTCAACA AGTGAAGGTTTATTACTGAAGATTGATCCATTGTTGCCTAAAGAAGTAAAAAATGAAGAAAGTGAAAAAGAAGATGCCTAAATGTGGTGAATTGTGAAATTACTTTCAGTGGTTTAAGAAGCAATGGA GAAAATGATAAAACTGCATAATTTTTACAGTTGATGTCTTGTTATTGATCATACTTGAAAGTGAACTTTAACATTGAAAAATCGTACAGTCATTTCAAGAATAAGAAAATAAAATTTTCTCTTTGTCT GAACCTGC
hide sequence
RefSeq Acc Id:
XM_008957674 ⟹ XP_008955922
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 3 52,109,970 - 52,202,015 (-) NCBI NHGRI_mPanPan1 4 52,296,559 - 52,388,609 (-) NCBI Mhudiblu_PPA_v0 4 46,239,491 - 46,331,540 (-) NCBI PanPan1.1 4 52,084,870 - 52,176,777 (-) NCBI
Sequence:
GCATGGGTAGAGGTAAGGCGGGGGGTTGTCTTGCAGGGGAAATGGCTCTGGCACCGAGTCTCTG GTTGCAGCAGAGTGCAAGGCGGATTCTGCTCTGGGTGCTGAAAATGCCTCGTGCTGTTTCTGGTCTCTAGGTTTTTCAGAGGCCTTGATACATCATCAAAGGCATAGCCTTTCCAAGATGGTTTATCA GACATCACTTTGTTCTTGTTCTGTAAACATCCGAGTGCCCAACAGACATTTTGCTGCTGCTACAAAGTCTGCAAAGAAAACAAAAAAAGGTGCTAAAGAAAAAACACCAGATGAGAAAAAAGATGAAA TAGAAAAAATAAAAGCATATCCCTATATGGAAGGCAAACCTGAGGATGATGTCTATTTAAAACGCTTATACCCGAGACAGATATATGAGGTGGAGAAAGCTGTTCACTTACTTAAGAAATTTCAAATT CTTGACTTTACTAGTCCAAAGCAAAGTGTTTATCTTGATTTGACACTGGATATGGCACTGGGAAAGAAGAAAAACGTGGAGCCATTTACCAGTGTTCTTAGTTTGCCATACCCATTTGCTTCCGAAAT CAATAAAGTTGCTGTATTTACAGAGAATGCATCAGAGGTCAAAATAGCGGAAGAAAATGGAGCTGCATTTGCAGGAGGCACTAGTCTGATACAGAAGATTTGGGATGATGAAATTGTTGCAGACTTTT ACGTAGCTGTTCCAGAAATAATGCCTGAACTTAATCGATTAAGGAAGAAACTGAATAAAAAATATCCAAAGCTTTCTCGAAATTCCATTGGCCGTGACATCCCCAAAATGCTTGAATTATTTAAAAAT GGACATGAAATTAAGGTAGATGAAGAAAGGGAGAACTTTCTCCAGACCAAAATAGCAACATTGGATATGTCAAGTGACCAGATAGCTGCCAATCTGCAAGCAGTTATTAATGAAGTTTGTAGGCACAG ACCGCTGAATTTGGGTCCCTTTGTGGTACGTGCTTTCCTTCGTAGTTCAACAAGTGAAGGTTTATTACTGAAGATTGATCCATTGTTGCCTAAAGAAGTAAAAAATGAAGAAAGTGAAAAAGAAGATG CCTAAATGTGGTGAATTGTGAAATTACTTTCAGTGGTTTAAGAAGCAATGGAGAAAATGATAAAACTGCATAATTTTTACAGTTGATGTCTTGTTATTGATCATACTTGAAAGTGAACTTTAACATTG AAAAATCGTACAGTCATTTCAAGAATAAGAAAATAAAATTTTCTCTTTGTCTGAACCTGC
hide sequence
RefSeq Acc Id:
XM_055111375 ⟹ XP_054967350
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 3 52,109,970 - 52,198,127 (-) NCBI NHGRI_mPanPan1 4 52,296,559 - 52,384,720 (-) NCBI
RefSeq Acc Id:
XP_003832329 ⟸ XM_003832281
- Peptide Label:
isoform X1
- UniProtKB:
A0A2R9C628 (UniProtKB/TrEMBL)
- Sequence:
MAAAVRCMGRALIHHQRHSLSKMVYQTSLCSCSVNIRVPNRHFAAATKSAKKTKKGAKEKTPDEKKDEIEKIKAYPYMEGKPEDDVYLKRLYPRQIYEVEKAVHLLKKFQILDFTSPKQSVYLDLTLD MALGKKKNVEPFTSVLSLPYPFASEINKVAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVADFYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNGHEIKVDEERENFLQTK IATLDMSSDQIAANLQAVINEVCRHRPLNLGPFVVRAFLRSSTSEGLLLKIDPLLPKEVKNEESEKEDA
hide sequence
RefSeq Acc Id:
XP_008955922 ⟸ XM_008957674
- Peptide Label:
isoform X2
- Sequence:
MVYQTSLCSCSVNIRVPNRHFAAATKSAKKTKKGAKEKTPDEKKDEIEKIKAYPYMEGKPEDDVYLKRLYPRQIYEVEKAVHLLKKFQILDFTSPKQSVYLDLTLDMALGKKKNVEPFTSVLSLPYPF ASEINKVAVFTENASEVKIAEENGAAFAGGTSLIQKIWDDEIVADFYVAVPEIMPELNRLRKKLNKKYPKLSRNSIGRDIPKMLELFKNGHEIKVDEERENFLQTKIATLDMSSDQIAANLQAVINEV CRHRPLNLGPFVVRAFLRSSTSEGLLLKIDPLLPKEVKNEESEKEDA
hide sequence
Ensembl Acc Id:
ENSPPAP00000037244 ⟸ ENSPPAT00000060143
RefSeq Acc Id:
XP_054967350 ⟸ XM_055111375
- Peptide Label:
isoform X2