ANKK1 (ankyrin repeat and kinase domain containing 1) - Rat Genome Database

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Gene: ANKK1 (ankyrin repeat and kinase domain containing 1) Pan paniscus
Analyze
Symbol: ANKK1
Name: ankyrin repeat and kinase domain containing 1
RGD ID: 11767789
Description: ENCODES a protein that exhibits ATP binding (inferred); kinase activity (inferred); protein kinase activity (inferred); INVOLVED IN cellular response to retinoic acid (ortholog); regulation of cell cycle process (ortholog); ASSOCIATED WITH alcohol dependence (ortholog); alcohol use disorder (ortholog); alcohol-induced mental disorder (ortholog); FOUND IN cytoplasm (inferred); nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: ankyrin repeat and protein kinase domain-containing protein 1
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Black Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29114,132,094 - 114,145,920 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111115,226,472 - 115,240,295 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011108,267,717 - 108,280,635 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111112,111,003 - 112,125,952 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11112,111,003 - 112,123,382 (+)EnsemblPanPan1.1 EnsemblpanPan2panpan1.1
JBrowse:




Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component
cytoplasm  (IEA)
nucleus  (IEA)

Molecular Function

References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
ANKK1
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v29114,132,094 - 114,145,920 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan111115,226,472 - 115,240,295 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v011108,267,717 - 108,280,635 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.111112,111,003 - 112,125,952 (+)NCBIPanPan1.1PanPan1.1panPan2
PanPan1.1 Ensembl11112,111,003 - 112,123,382 (+)EnsemblPanPan1.1 EnsemblpanPan2panpan1.1
ANKK1
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh3811113,387,779 - 113,400,416 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl11113,387,774 - 113,400,585 (+)EnsemblGRCh38.p14 Ensemblhg38GRCh38
GRCh3711113,258,501 - 113,271,138 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 3611112,763,723 - 112,776,350 (+)NCBIBuild 36Build 36hg18NCBI36
Build 3411112,763,722 - 112,776,350NCBI
Celera11110,411,445 - 110,424,071 (+)NCBICelera
Cytogenetic Map11q23.2NCBI
HuRef11109,186,137 - 109,198,762 (+)NCBIHuRef
CHM1_111113,141,499 - 113,154,124 (+)NCBICHM1_1
T2T-CHM13v2.011113,398,282 - 113,410,917 (+)NCBIT2T-CHM13v2.0
Ankk1
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39949,326,494 - 49,338,341 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl949,326,494 - 49,338,321 (-)EnsemblGRCm39 EnsemblGRCm39
GRCm38949,415,194 - 49,427,041 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl949,415,194 - 49,427,021 (-)EnsemblGRCm38.p6 Ensemblmm10GRCm38
MGSCv37949,223,327 - 49,235,126 (-)NCBIMGSCv37MGSCv37mm9NCBIm37
MGSCv36949,167,452 - 49,179,251 (-)NCBIMGSCv36mm8
Celera946,712,988 - 46,724,868 (-)NCBICelera
Cytogenetic Map9A5.3NCBI
cM Map926.83NCBI
Ankk1
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8858,676,327 - 58,685,012 (-)NCBIGRCr8GRCr8GRCr8
GRCr8 Ensembl858,676,327 - 58,684,489 (-)EnsemblGRCr8
mRatBN7.2849,779,862 - 49,788,024 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl849,779,862 - 49,788,024 (-)EnsemblmRatBN7.2
UTH_Rnor_SHR_Utx855,283,981 - 55,292,160 (-)NCBIUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0853,562,857 - 53,571,036 (-)NCBIUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0851,427,117 - 51,435,296 (-)NCBIUTH_Rnor_WKY_Bbb_1.0
Dahl_SR_JrHsd859,498,467 - 59,506,646 (-)NCBI
Lyon_Normotensive861,697,321 - 61,705,500 (-)NCBI
Lyon_Hypertensive860,127,994 - 60,136,173 (-)NCBI
F344_StmMcwi851,531,289 - 51,539,468 (-)NCBI
Rnor_6.0853,750,631 - 53,758,925 (-)NCBIRnor_6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl853,751,091 - 53,758,774 (-)EnsemblRnor_6.0 Ensemblrn6Rnor6.0
Rnor_5.0852,370,801 - 52,378,944 (-)NCBIRnor_5.0Rnor_5.0rn5
RGSC_v3.4852,714,745 - 52,722,913 (-)NCBIRGSC_v3.4RGSC_v3.4rn4
Celera849,331,721 - 49,340,015 (-)NCBICelera
RGSC_v3.1852,734,164 - 52,741,935 (-)NCBI
Cytogenetic Map8q23NCBI
Ankk1
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541215,035,388 - 15,046,139 (+)EnsemblChiLan1.0 Ensembl
ChiLan1.0NW_00495541215,036,071 - 15,046,118 (+)NCBIChiLan1.0ChiLan1.0
ANKK1
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1519,801,511 - 19,814,359 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl519,801,542 - 19,814,481 (-)EnsemblCanFam3.1 EnsemblcanFam3CanFam3.1
Dog10K_Boxer_Tasha519,723,265 - 19,736,301 (-)NCBIDog10K_Boxer_TashaDog10K_Boxer_Tasha
ROS_Cfam_1.0519,822,410 - 19,835,444 (-)NCBIROS_Cfam_1.0ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl519,822,441 - 19,835,756 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1519,884,965 - 19,897,951 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0519,786,175 - 19,799,184 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0519,833,938 - 19,846,967 (-)NCBIUU_Cfam_GSD_1.0UU_Cfam_GSD_1.0
Ankk1
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mIctTri1.hap1496,814,015 - 96,850,778 (+)NCBImIctTri1.hap1
HiC_Itri_2NW_02440494795,531,923 - 95,543,648 (+)NCBIHiC_Itri_2
SpeTri2.0NW_0049366121,161,961 - 1,173,318 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ANKK1
(Sus scrofa - pig)		 No map positions available.
ANKK1
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
mChlSab1.0.hap11109,704,008 - 109,727,337 (+)NCBImChlSab1.0.hap1
Vero_WHO_p1.0NW_02366604321,245,489 - 21,261,506 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
ChlSab1.11104,752,023 - 104,765,071 (+)NCBIChlSab1.1ChlSab1.1chlSab2
Ankk1
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247848,810,409 - 8,821,732 (+)NCBIHetGla 1.0HetGla 1.0hetGla2
HetGla_female_1.0 EnsemblNW_0046247848,810,559 - 8,820,444 (+)EnsemblHetGla_female_1.0 EnsemblhetGla2HetGla_female_1.0 Ensembl
Naked mole-rat maternal Ensembl553,906,354 - 53,917,413 (-)Ensembl
Ankk1
(Rattus rattus - black rat)
Black Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Rrattus_CSIRO_v1843,903,272 - 43,911,049 (-)NCBIRrattus_CSIRO_v1Rrattus_CSIRO_v1


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_034933706 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000009 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSPPAT00000030220   ⟹   ENSPPAP00000007675
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl11112,111,003 - 112,123,382 (+)Ensembl
RefSeq Acc Id: XM_034933706   ⟹   XP_034789597
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v29114,132,094 - 114,145,920 (+)NCBI
NHGRI_mPanPan111115,226,472 - 115,240,295 (+)NCBI
Mhudiblu_PPA_v011108,267,717 - 108,280,635 (+)NCBI
Protein Sequences
Protein RefSeqs XP_034789597 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000007675.1
  ENSPPAP00050039161
RefSeq Acc Id: XP_034789597   ⟸   XM_034933706
Ensembl Acc Id: ENSPPAP00000007675   ⟸   ENSPPAT00000030220
Protein Domains
Protein kinase


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000026996 Ensembl, UniProtKB/TrEMBL
  ENSPPAG00050028084 ENTREZGENE
Ensembl Transcript ENSPPAT00000030220.1 UniProtKB/TrEMBL
  ENSPPAT00050059913 ENTREZGENE
Gene3D-CATH 1.25.40.20 UniProtKB/TrEMBL
  Transferase(Phosphotransferase) domain 1 UniProtKB/TrEMBL
InterPro Ankyrin_rpt UniProtKB/TrEMBL
  Ankyrin_rpt-contain_sf UniProtKB/TrEMBL
  Kinase-like_dom_sf UniProtKB/TrEMBL
  Prot_kinase_dom UniProtKB/TrEMBL
  Ser-Thr/Tyr_kinase_cat_dom UniProtKB/TrEMBL
  Ser/Thr_kinase_AS UniProtKB/TrEMBL
NCBI Gene ANKK1 ENTREZGENE
PANTHER ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39 UniProtKB/TrEMBL
  ANKYRIN REPEAT DOMAIN-CONTAINING PROTEIN 39-RELATED UniProtKB/TrEMBL
Pfam Ank_2 UniProtKB/TrEMBL
  PK_Tyr_Ser-Thr UniProtKB/TrEMBL
PRINTS ANKYRIN UniProtKB/TrEMBL
PROSITE ANK_REP_REGION UniProtKB/TrEMBL
  ANK_REPEAT UniProtKB/TrEMBL
  PROTEIN_KINASE_DOM UniProtKB/TrEMBL
  PROTEIN_KINASE_ST UniProtKB/TrEMBL
SMART ANK UniProtKB/TrEMBL
  S_TKc UniProtKB/TrEMBL
Superfamily-SCOP SSF48403 UniProtKB/TrEMBL
  SSF56112 UniProtKB/TrEMBL
UniProt A0A2R8ZUZ0_PANPA UniProtKB/TrEMBL