DZIP1L (DAZ interacting zinc finger protein 1 like) - Rat Genome Database

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Gene: DZIP1L (DAZ interacting zinc finger protein 1 like) Pan paniscus
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Symbol: DZIP1L
Name: DAZ interacting zinc finger protein 1 like
RGD ID: 11756906
Description: ENCODES a protein that exhibits metal ion binding (inferred); INVOLVED IN ciliary transition zone assembly (ortholog); cilium assembly (ortholog); floor plate development (ortholog); ASSOCIATED WITH autosomal recessive polycystic kidney disease (ortholog); genetic disease (ortholog); polycystic kidney disease 5 (ortholog); FOUND IN axoneme (inferred); cell projection (inferred); centriole (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: cilium assembly protein DZIP1L; DAZ interacting protein 1-like; zinc finger protein DZIP1L; zinc finger protein DZIP1L-like
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22135,922,910 - 136,020,795 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13135,971,555 - 136,025,449 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03135,089,250 - 135,143,117 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13142,540,798 - 142,591,297 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3142,541,624 - 142,582,817 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Biological Process

Cellular Component

Molecular Function

References
Additional References at PubMed
PMID:30032202  


Genomics

Comparative Map Data
DZIP1L
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22135,922,910 - 136,020,795 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan13135,971,555 - 136,025,449 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v03135,089,250 - 135,143,117 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.13142,540,798 - 142,591,297 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl3142,541,624 - 142,582,817 (-)Ensemblpanpan1.1panPan2
DZIP1L
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh383138,061,990 - 138,115,608 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl3138,061,990 - 138,115,818 (-)EnsemblGRCh38hg38GRCh38
GRCh373137,780,832 - 137,834,450 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 363139,263,522 - 139,317,141 (-)NCBINCBI36Build 36hg18NCBI36
Build 343139,263,531 - 139,317,149NCBI
Celera3136,205,489 - 136,259,231 (-)NCBICelera
Cytogenetic Map3q22.3NCBI
HuRef3135,155,607 - 135,209,215 (-)NCBIHuRef
CHM1_13137,744,704 - 137,798,269 (-)NCBICHM1_1
T2T-CHM13v2.03140,788,462 - 140,856,195 (-)NCBIT2T-CHM13v2.0
Dzip1l
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39999,511,448 - 99,552,128 (+)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl999,511,549 - 99,551,309 (+)EnsemblGRCm39 Ensembl
GRCm38999,629,501 - 99,670,075 (+)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl999,629,496 - 99,669,256 (+)EnsemblGRCm38mm10GRCm38
MGSCv37999,530,014 - 99,569,675 (+)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36999,438,947 - 99,478,608 (+)NCBIMGSCv36mm8
Celera999,165,989 - 99,205,734 (+)NCBICelera
Cytogenetic Map9E3.3NCBI
cM Map951.93NCBI
Dzip1l
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr88109,067,466 - 109,108,390 (+)NCBIGRCr8
mRatBN7.28100,188,414 - 100,229,077 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl8100,194,999 - 100,228,988 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx8105,861,625 - 105,899,003 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.08104,060,927 - 104,098,305 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.08101,903,461 - 101,940,839 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.08107,875,659 - 107,916,298 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl8107,875,991 - 107,916,294 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.08107,299,410 - 107,339,685 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.48104,507,601 - 104,542,280 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.18104,527,055 - 104,561,735 (+)NCBI
Celera899,595,781 - 99,629,825 (+)NCBICelera
Cytogenetic Map8q31NCBI
Dzip1l
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_004955501897,692 - 965,626 (+)EnsemblChiLan1.0
ChiLan1.0NW_004955501895,245 - 965,626 (+)NCBIChiLan1.0ChiLan1.0
DZIP1L
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12334,285,223 - 34,334,957 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2334,285,864 - 34,331,680 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2334,269,895 - 34,327,283 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02334,817,204 - 34,874,635 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2334,817,209 - 34,872,059 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12334,499,127 - 34,556,539 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02334,564,569 - 34,621,916 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02334,815,608 - 34,872,988 (-)NCBIUU_Cfam_GSD_1.0
Dzip1l
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440560273,697,867 - 73,730,162 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_004936540436,161 - 469,951 (-)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_004936540437,638 - 469,945 (-)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DZIP1L
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1378,861,024 - 78,916,229 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11378,861,007 - 78,916,633 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21386,587,300 - 86,599,588 (-)NCBISscrofa10.2Sscrofa10.2susScr3
DZIP1L
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.11552,425,472 - 52,480,484 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl1552,428,570 - 52,480,887 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366604125,439,531 - 25,494,393 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dzip1l
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_00462473014,568,382 - 14,619,272 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_00462473014,568,625 - 14,619,673 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_003822483 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034957454 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_034957455 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055110520 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055110521 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_055110522 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063602944 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063602945 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063602946 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063602947 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063602948 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063602949 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XM_063602950 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010111657 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010111658 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
  XR_010111659 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000002 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Ensembl Acc Id: ENSPPAT00000055972   ⟹   ENSPPAP00000033102
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl3142,541,624 - 142,582,817 (-)Ensembl
Ensembl Acc Id: ENSPPAT00000055974   ⟹   ENSPPAP00000033104
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl3142,547,965 - 142,582,817 (-)Ensembl
RefSeq Acc Id: XM_034957455   ⟹   XP_034813346
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22135,964,820 - 136,020,761 (-)NCBI
NHGRI_mPanPan13135,972,552 - 136,025,449 (-)NCBI
Mhudiblu_PPA_v03135,090,095 - 135,143,117 (-)NCBI
RefSeq Acc Id: XM_055110520   ⟹   XP_054966495
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22135,964,820 - 136,020,795 (-)NCBI
NHGRI_mPanPan13135,972,552 - 136,025,449 (-)NCBI
RefSeq Acc Id: XM_055110521   ⟹   XP_054966496
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22135,964,820 - 136,020,794 (-)NCBI
NHGRI_mPanPan13135,972,552 - 136,025,449 (-)NCBI
RefSeq Acc Id: XM_055110522   ⟹   XP_054966497
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22135,964,820 - 136,018,460 (-)NCBI
NHGRI_mPanPan13135,971,555 - 136,023,173 (-)NCBI
RefSeq Acc Id: XM_063602944   ⟹   XP_063459014
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22135,964,820 - 136,020,735 (-)NCBI
RefSeq Acc Id: XM_063602945   ⟹   XP_063459015
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22135,964,820 - 136,020,735 (-)NCBI
RefSeq Acc Id: XM_063602946   ⟹   XP_063459016
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22135,964,820 - 136,020,735 (-)NCBI
RefSeq Acc Id: XM_063602947   ⟹   XP_063459017
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22135,964,820 - 136,020,735 (-)NCBI
RefSeq Acc Id: XM_063602948   ⟹   XP_063459018
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22135,922,910 - 136,020,794 (-)NCBI
RefSeq Acc Id: XM_063602949   ⟹   XP_063459019
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22135,922,910 - 136,020,735 (-)NCBI
RefSeq Acc Id: XM_063602950   ⟹   XP_063459020
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22135,922,910 - 136,020,735 (-)NCBI
RefSeq Acc Id: XR_010111657
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22135,922,910 - 136,020,735 (-)NCBI
RefSeq Acc Id: XR_010111658
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22135,922,910 - 136,020,735 (-)NCBI
RefSeq Acc Id: XR_010111659
Type: NON-CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22135,922,910 - 136,020,735 (-)NCBI
RefSeq Acc Id: XP_034813346   ⟸   XM_034957455
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BTV9 (UniProtKB/TrEMBL)
Ensembl Acc Id: ENSPPAP00000033104   ⟸   ENSPPAT00000055974
Ensembl Acc Id: ENSPPAP00000033102   ⟸   ENSPPAT00000055972
RefSeq Acc Id: XP_054966497   ⟸   XM_055110522
- Peptide Label: isoform X2
- UniProtKB: A0A2R9BTV9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054966495   ⟸   XM_055110520
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BTV9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_054966496   ⟸   XM_055110521
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BTV9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063459018   ⟸   XM_063602948
- Peptide Label: isoform X3
- UniProtKB: A0A2R9BTV9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063459020   ⟸   XM_063602950
- Peptide Label: isoform X3
- UniProtKB: A0A2R9BTV9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063459019   ⟸   XM_063602949
- Peptide Label: isoform X3
- UniProtKB: A0A2R9BTV9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063459015   ⟸   XM_063602945
- Peptide Label: isoform X2
- UniProtKB: A0A2R9BTV9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063459017   ⟸   XM_063602947
- Peptide Label: isoform X2
- UniProtKB: A0A2R9BTV9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063459014   ⟸   XM_063602944
- Peptide Label: isoform X2
- UniProtKB: A0A2R9BTV9 (UniProtKB/TrEMBL)
RefSeq Acc Id: XP_063459016   ⟸   XM_063602946
- Peptide Label: isoform X2
- UniProtKB: A0A2R9BTV9 (UniProtKB/TrEMBL)
Protein Domains
C2H2-type


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000039410 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000055972.1 UniProtKB/TrEMBL
  ENSPPAT00000055974.1 UniProtKB/TrEMBL
InterPro DZIP1_N UniProtKB/TrEMBL
  DZIP_RILPL UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
NCBI Gene DZIP1L ENTREZGENE
PANTHER ZINC FINGER PROTEIN DZIP1 UniProtKB/TrEMBL
  ZINC FINGER PROTEIN DZIP1L UniProtKB/TrEMBL
Pfam Dzip-like_N UniProtKB/TrEMBL
PROSITE ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
UniProt A0A2R9BTV9 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9C3E7_PANPA UniProtKB/TrEMBL