ZNF333 (zinc finger protein 333) - Rat Genome Database

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Gene: ZNF333 (zinc finger protein 333) Pan paniscus
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Symbol: ZNF333
Name: zinc finger protein 333
RGD ID: 11741989
Description: ENCODES a protein that exhibits DNA binding (inferred); zinc ion binding (inferred); INVOLVED IN regulation of DNA-templated transcription (inferred); FOUND IN nucleus (inferred)
Type: protein-coding
RefSeq Status: MODEL
RGD Orthologs
Human
Mouse
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22019,604,212 - 19,634,802 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11918,621,158 - 18,650,501 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01914,237,791 - 14,268,376 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11915,098,084 - 15,127,985 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1915,101,366 - 15,143,096 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model



Biological Process

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ZNF333Bonoboregulation of DNA-templated transcription involved_inIEAInterPro:IPR001909 and InterPro:IPR036051150520179 InterProGO_REF:0000002

Cellular Component

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ZNF333Bonobonucleus located_inIEAUniProtKB-SubCell:SL-0191150520179 UniProtGO_REF:0000044

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
ZNF333BonoboDNA binding enablesIEAUniProtKB-KW:KW-0238150520179 UniProtGO_REF:0000043
ZNF333Bonoboprotein binding enablesISOUniProtKB:Q132639068941 PMID:31403225 and PMID:33961781IntActPMID:31403225 and PMID:33961781
ZNF333Bonoboprotein binding enablesISOUniProtKB:O14645 more ...9068941 PMID:32814053IntActPMID:32814053
ZNF333Bonobozinc ion binding enablesIEAUniProtKB-KW:KW-0863150520179 UniProtGO_REF:0000043

PMID:30032202  



ZNF333
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22019,604,212 - 19,634,802 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11918,621,158 - 18,650,501 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01914,237,791 - 14,268,376 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11915,098,084 - 15,127,985 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1915,101,366 - 15,143,096 (+)Ensemblpanpan1.1panPan2
ZNF333
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381914,689,787 - 14,733,742 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1914,689,801 - 14,733,746 (+)EnsemblGRCh38hg38GRCh38
GRCh371914,800,860 - 14,844,554 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361914,661,870 - 14,692,772 (+)NCBINCBI36Build 36hg18NCBI36
Build 341914,661,869 - 14,692,772NCBI
Celera1914,694,891 - 14,725,784 (+)NCBICelera
Cytogenetic Map19p13.12NCBI
HuRef1914,367,302 - 14,398,179 (+)NCBIHuRef
CHM1_11914,800,389 - 14,831,266 (+)NCBICHM1_1
T2T-CHM13v2.01914,816,091 - 14,860,049 (+)NCBIT2T-CHM13v2.0
Vmn1r66
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39710,007,755 - 10,009,278 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl710,006,918 - 10,011,933 (-)EnsemblGRCm39 Ensembl
GRCm38710,273,828 - 10,275,351 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl710,272,991 - 10,278,006 (-)EnsemblGRCm38mm10GRCm38
MGSCv37710,859,177 - 10,860,700 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv3679,148,721 - 9,150,244 (-)NCBIMGSCv36mm8
Celera77,732,819 - 7,734,342 (+)NCBICelera
Cytogenetic Map7A1NCBI
cM Map76.34NCBI
Znf333
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495541531,661,089 - 31,686,000 (-)EnsemblChiLan1.0
ChiLan1.0NW_00495541531,663,213 - 31,687,372 (-)NCBIChiLan1.0ChiLan1.0
ZNF333
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.12047,981,662 - 48,003,802 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl2047,982,076 - 47,995,620 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha2047,856,662 - 47,879,110 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.02048,495,230 - 48,517,509 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl2048,493,003 - 48,517,706 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.12047,711,178 - 47,733,680 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.02048,135,340 - 48,157,626 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.02048,380,171 - 48,402,448 (-)NCBIUU_Cfam_GSD_1.0
Znf333
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405118207,177,873 - 207,196,488 (-)NCBIHiC_Itri_2
SpeTri2.0NW_0049366593,158,389 - 3,177,784 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
ZNF333
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl264,585,109 - 64,607,783 (-)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1264,585,113 - 64,607,818 (-)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.2264,741,947 - 64,761,907 (+)NCBISscrofa10.2Sscrofa10.2susScr3
ZNF333
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1613,348,193 - 13,381,843 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl613,355,192 - 13,376,980 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660746,217,529 - 6,250,801 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0

.






Ensembl Acc Id: ENSPPAT00000033997   ⟹   ENSPPAP00000011342
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1915,101,366 - 15,127,985 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000034000   ⟹   ENSPPAP00000011345
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1915,101,412 - 15,143,096 (+)Ensembl
Ensembl Acc Id: ENSPPAT00000034003   ⟹   ENSPPAP00000011348
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1915,102,654 - 15,126,350 (+)Ensembl
RefSeq Acc Id: XM_003807073   ⟹   XP_003807121
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22019,604,217 - 19,634,802 (+)NCBI
NHGRI_mPanPan11918,621,165 - 18,650,501 (+)NCBI
Mhudiblu_PPA_v01914,237,797 - 14,268,376 (+)NCBI
PanPan1.11915,098,084 - 15,127,985 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008959131   ⟹   XP_008957379
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22019,613,460 - 19,634,802 (+)NCBI
NHGRI_mPanPan11918,630,389 - 18,650,501 (+)NCBI
Mhudiblu_PPA_v01914,246,943 - 14,267,151 (+)NCBI
PanPan1.11915,109,219 - 15,127,978 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008959132   ⟹   XP_008957380
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22019,604,212 - 19,634,802 (+)NCBI
NHGRI_mPanPan11918,621,158 - 18,650,501 (+)NCBI
Mhudiblu_PPA_v01914,237,797 - 14,267,151 (+)NCBI
PanPan1.11915,098,084 - 15,126,760 (+)NCBI
Sequence:
RefSeq Acc Id: XM_034946499   ⟹   XP_034802390
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22019,604,219 - 19,634,802 (+)NCBI
NHGRI_mPanPan11918,621,165 - 18,650,501 (+)NCBI
Mhudiblu_PPA_v01914,237,791 - 14,267,151 (+)NCBI
RefSeq Acc Id: XM_055104366   ⟹   XP_054960341
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22019,609,831 - 19,634,802 (+)NCBI
NHGRI_mPanPan11918,626,764 - 18,650,501 (+)NCBI
RefSeq Acc Id: XM_057300750   ⟹   XP_057156733
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22019,604,217 - 19,634,802 (+)NCBI
NHGRI_mPanPan11918,621,165 - 18,650,501 (+)NCBI
RefSeq Acc Id: XM_063600778   ⟹   XP_063456848
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22019,613,460 - 19,634,802 (+)NCBI
1 to 5 of 10 rows
1 to 5 of 10 rows
RefSeq Acc Id: XP_003807121   ⟸   XM_003807073
- Peptide Label: isoform X1
- UniProtKB: A0A2R9A239 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008957380   ⟸   XM_008959132
- Peptide Label: isoform X6
- UniProtKB: A0A2R9A6P2 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008957379   ⟸   XM_008959131
- Peptide Label: isoform X5
- Sequence:
RefSeq Acc Id: XP_034802390   ⟸   XM_034946499
- Peptide Label: isoform X2
Ensembl Acc Id: ENSPPAP00000011342   ⟸   ENSPPAT00000033997
C2H2-type   KRAB



1 to 32 of 32 rows
Database
Acc Id
Source(s)
Ensembl Genes ENSPPAG00000028875 Ensembl, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000033997.1 UniProtKB/TrEMBL
  ENSPPAT00000034000.1 UniProtKB/TrEMBL
  ENSPPAT00000034003.1 UniProtKB/TrEMBL
Gene3D-CATH 6.10.140.140 UniProtKB/TrEMBL
  Classic Zinc Finger UniProtKB/TrEMBL
InterPro KRAB UniProtKB/TrEMBL
  KRAB_dom_sf UniProtKB/TrEMBL
  Krueppel_C2H2_ZnF UniProtKB/TrEMBL
  Znf_C2H2-type UniProtKB/TrEMBL
  Znf_C2H2_sf UniProtKB/TrEMBL
  Znf_C2H2_type UniProtKB/TrEMBL
KEGG Report pps:100971043 UniProtKB/TrEMBL
NCBI Gene ZNF333 ENTREZGENE
PANTHER GASTRULA ZINC FINGER PROTEIN XLCGF57.1-LIKE-RELATED UniProtKB/TrEMBL
  KRAB DOMAIN C2H2 ZINC FINGER UniProtKB/TrEMBL
  RIKEN CDNA 6720489N17 GENE-RELATED UniProtKB/TrEMBL
  ZNF44 PROTEIN UniProtKB/TrEMBL
Pfam KRAB UniProtKB/TrEMBL
  zf-C2H2 UniProtKB/TrEMBL
  zf-H2C2_2 UniProtKB/TrEMBL
PROSITE KRAB UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_1 UniProtKB/TrEMBL
  ZINC_FINGER_C2H2_2 UniProtKB/TrEMBL
SMART KRAB UniProtKB/TrEMBL
  ZnF_BED UniProtKB/TrEMBL
  ZnF_C2H2 UniProtKB/TrEMBL
Superfamily-SCOP SSF109640 UniProtKB/TrEMBL
  SSF57667 UniProtKB/TrEMBL
UniProt A0A2R9A239 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9A263_PANPA UniProtKB/TrEMBL
  A0A2R9A6P2 ENTREZGENE, UniProtKB/TrEMBL
1 to 32 of 32 rows