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Gene: TSPAN9 (tetraspanin 9) Pan paniscus

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Symbol:

TSPAN9

Name:

tetraspanin 9

RGD ID:

11715557

Description:

INVOLVED IN collagen-activated tyrosine kinase receptor signaling pathway (ortholog); mitocytosis (ortholog); neutrophil homeostasis (ortholog); ASSOCIATED WITH Hyperphosphatemic Familial Tumoral Calcinosis 1 (ortholog); FOUND IN migrasome (ortholog); tetraspanin-enriched microdomain (ortholog)

Type:

protein-coding

RefSeq Status:

MODEL

Previously known as:

tetraspanin-9

RGD Orthologs

Alliance Orthologs

More Info

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More Info

Species	Gene symbol and name	Data Source	Assertion derived from	less info ...
Orthologs ¹				less info ...
Homo sapiens (human):	TSPAN9 (tetraspanin 9)	NCBI	Ortholog
Mus musculus (house mouse):	Tspan9 (tetraspanin 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Rattus norvegicus (Norway rat):	Tspan9 (tetraspanin 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chinchilla lanigera (long-tailed chinchilla):	Tspan9 (tetraspanin 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Canis lupus familiaris (dog):	TSPAN9 (tetraspanin 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Ictidomys tridecemlineatus (thirteen-lined ground squirrel):	Tspan9 (tetraspanin 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Sus scrofa (pig):	TSPAN9 (tetraspanin 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Chlorocebus sabaeus (green monkey):	LOC103218397 (tetraspanin-9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline
Heterocephalus glaber (naked mole-rat):	Tspan9 (tetraspanin 9)	Transitive Ortholog Pipeline	Transitive Ortholog Pipeline

Latest Assembly:

Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly

Position:

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	8,608,855 - 8,840,601 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	8,607,257 - 8,837,357 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	3,190,897 - 3,410,042 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	3,135,211 - 3,334,244 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

JBrowse:

View Region in Genome Browser (JBrowse)

Model

Annotation Click to see Annotation Detail View

Disease Annotations Click to see Annotation Detail View

Hyperphosphatemic Familial Tumoral Calcinosis 1 (ISO)

Gene Ontology Annotations Click to see Annotation Detail View

Biological Process

collagen-activated tyrosine kinase receptor signaling pathway (ISO)

mitocytosis (ISO)

neutrophil homeostasis (ISO)

platelet aggregation (ISO)

positive regulation of peptidyl-tyrosine phosphorylation (ISO)

receptor diffusion trapping (ISO)

regulation of mitochondrial membrane potential (ISO)

Cellular Component

membrane (IEA)

migrasome (ISO)

plasma membrane (IEA)

tetraspanin-enriched microdomain (ISO)

References

Additional References at PubMed

PMID:30032202

Genomics

Comparative Map Data

TSPAN9
(Pan paniscus - bonobo/pygmy chimpanzee)

Bonobo Assembly	Chr	Position (strand)	Source	Genome Browsers
Bonobo Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
NHGRI_mPanPan1-v2	10	8,608,855 - 8,840,601 (+)	NCBI		NHGRI_mPanPan1-v2
NHGRI_mPanPan1	12	8,607,257 - 8,837,357 (+)	NCBI		NHGRI_mPanPan1
Mhudiblu_PPA_v0	12	3,190,897 - 3,410,042 (+)	NCBI	Mhudiblu_PPA_v0	Mhudiblu_PPA_v0	panPan3
PanPan1.1	12	3,135,211 - 3,334,244 (+)	NCBI	panpan1.1	PanPan1.1	panPan2

TSPAN9
(Homo sapiens - human)

Human Assembly	Chr	Position (strand)	Source	Genome Browsers
Human Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCh38	12	3,077,379 - 3,286,559 (+)	NCBI	GRCh38	GRCh38	hg38	GRCh38
GRCh38.p14 Ensembl	12	3,077,355 - 3,286,564 (+)	Ensembl	GRCh38		hg38	GRCh38
GRCh37	12	3,186,545 - 3,395,725 (+)	NCBI	GRCh37	GRCh37	hg19	GRCh37
Build 36	12	3,056,818 - 3,265,991 (+)	NCBI	NCBI36	Build 36	hg18	NCBI36
Celera	12	4,800,573 - 5,009,494 (+)	NCBI		Celera
Cytogenetic Map	12	p13.33-p13.32	NCBI
HuRef	12	3,043,244 - 3,251,902 (+)	NCBI		HuRef
CHM1_1	12	3,185,640 - 3,394,816 (+)	NCBI		CHM1_1
T2T-CHM13v2.0	12	3,083,510 - 3,293,033 (+)	NCBI		T2T-CHM13v2.0

Tspan9
(Mus musculus - house mouse)

Mouse Assembly	Chr	Position (strand)	Source	Genome Browsers
Mouse Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCm39	6	127,938,359 - 128,120,541 (-)	NCBI	GRCm39	GRCm39	mm39
GRCm39 Ensembl	6	127,938,359 - 128,120,557 (-)	Ensembl		GRCm39 Ensembl
GRCm38	6	127,961,396 - 128,143,578 (-)	NCBI	GRCm38	GRCm38	mm10	GRCm38
GRCm38.p6 Ensembl	6	127,961,396 - 128,143,594 (-)	Ensembl	GRCm38		mm10	GRCm38
MGSCv37	6	127,911,418 - 128,093,596 (-)	NCBI	GRCm37	MGSCv37	mm9	NCBIm37
MGSCv36	6	127,927,019 - 128,109,197 (-)	NCBI		MGSCv36	mm8
Celera	6	129,634,256 - 129,815,522 (-)	NCBI		Celera
Cytogenetic Map	6	F3	NCBI
cM Map	6	62.73	NCBI

Tspan9
(Rattus norvegicus - Norway rat)

Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
GRCr8	4	162,500,029 - 162,681,699 (-)	NCBI		GRCr8
mRatBN7.2	4	160,813,879 - 160,995,574 (-)	NCBI	mRatBN7.2	mRatBN7.2
mRatBN7.2 Ensembl	4	160,813,879 - 160,995,501 (-)	Ensembl		mRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx	4	167,043,850 - 167,118,214 (-)	NCBI	Rnor_SHR	UTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0	4	162,826,769 - 162,901,133 (-)	NCBI	Rnor_SHRSP	UTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0	4	161,460,829 - 161,535,196 (-)	NCBI	Rnor_WKY	UTH_Rnor_WKY_Bbb_1.0
Rnor_6.0	4	160,530,726 - 160,725,056 (-)	NCBI	Rnor6.0	Rnor_6.0	rn6	Rnor6.0
Rnor_6.0 Ensembl	4	160,530,720 - 160,662,974 (-)	Ensembl	Rnor6.0		rn6	Rnor6.0
Rnor_5.0	4	230,893,933 - 231,085,237 (+)	NCBI	Rnor5.0	Rnor_5.0	rn5	Rnor5.0
RGSC_v3.4	4	164,416,321 - 164,490,755 (-)	NCBI	RGSC3.4	RGSC_v3.4	rn4	RGSC3.4
RGSC_v3.1	4	164,662,142 - 164,735,595 (-)	NCBI
Celera	4	149,521,883 - 149,596,105 (-)	NCBI		Celera
Cytogenetic Map	4	q42	NCBI

Tspan9
(Chinchilla lanigera - long-tailed chinchilla)

Chinchilla Assembly	Chr	Position (strand)	Source	Genome Browsers
Chinchilla Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChiLan1.0	NW_004955429	18,696,528 - 18,772,593 (+)	NCBI	ChiLan1.0	ChiLan1.0

TSPAN9
(Canis lupus familiaris - dog)

Dog Assembly	Chr	Position (strand)	Source	Genome Browsers
Dog Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
CanFam3.1	27	41,526,757 - 41,684,909 (-)	NCBI	CanFam3.1	CanFam3.1	canFam3	CanFam3.1
CanFam3.1 Ensembl	27	41,529,151 - 41,611,686 (-)	Ensembl	CanFam3.1		canFam3	CanFam3.1
Dog10K_Boxer_Tasha	27	4,956,399 - 5,155,923 (+)	NCBI		Dog10K_Boxer_Tasha
ROS_Cfam_1.0	27	41,884,395 - 42,084,481 (-)	NCBI		ROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl	27	41,884,402 - 42,084,443 (-)	Ensembl		ROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1	27	41,821,703 - 42,021,388 (-)	NCBI		UMICH_Zoey_3.1
UNSW_CanFamBas_1.0	27	41,796,674 - 41,996,298 (-)	NCBI		UNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0	27	4,316,539 - 4,516,244 (+)	NCBI		UU_Cfam_GSD_1.0

Tspan9
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)

Squirrel Assembly	Chr	Position (strand)	Source	Genome Browsers
Squirrel Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HiC_Itri_2	NW_024404945	105,594,518 - 105,785,420 (-)	NCBI		HiC_Itri_2
SpeTri2.0 Ensembl	NW_004936606	3,506,357 - 3,586,849 (+)	Ensembl	SpeTri2.0	SpeTri2.0 Ensembl
SpeTri2.0	NW_004936606	3,398,745 - 3,589,647 (+)	NCBI	SpeTri2.0	SpeTri2.0		SpeTri2.0

TSPAN9
(Sus scrofa - pig)

Pig Assembly	Chr	Position (strand)	Source	Genome Browsers
Pig Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
Sscrofa11.1 Ensembl	5	66,913,769 - 67,106,233 (-)	Ensembl	Sscrofa11.1		susScr11	Sscrofa11.1
Sscrofa11.1	5	66,913,750 - 67,106,303 (-)	NCBI	Sscrofa11.1	Sscrofa11.1	susScr11	Sscrofa11.1
Sscrofa10.2	5	69,219,141 - 69,394,409 (-)	NCBI	Sscrofa10.2	Sscrofa10.2	susScr3

LOC103218397
(Chlorocebus sabaeus - green monkey)

Green Monkey Assembly	Chr	Position (strand)	Source	Genome Browsers
Green Monkey Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
ChlSab1.1	11	3,138,764 - 3,347,796 (+)	NCBI	ChlSab1.1	ChlSab1.1	chlSab2
ChlSab1.1 Ensembl	11	3,145,015 - 3,347,849 (+)	Ensembl	ChlSab1.1	ChlSab1.1 Ensembl	chlSab2
Vero_WHO_p1.0	NW_023666063	4,948,875 - 5,159,692 (-)	NCBI	Vero_WHO_p1.0	Vero_WHO_p1.0

Tspan9
(Heterocephalus glaber - naked mole-rat)

Naked Mole-Rat Assembly	Chr	Position (strand)	Source	Genome Browsers
Naked Mole-Rat Assembly	Chr	Position (strand)	Source	JBrowse	NCBI	UCSC	Ensembl
HetGla_female_1.0 Ensembl	NW_004624860	493,668 - 575,138 (+)	Ensembl	HetGla_female_1.0	HetGla_female_1.0 Ensembl	hetGla2
HetGla 1.0	NW_004624860	392,163 - 575,138 (+)	NCBI	HetGla_female_1.0	HetGla 1.0	hetGla2

Expression

RNA-SEQ Expression

Click on a value in the shaded box below the category label to view a detailed expression data table for that system.

Sequence

Nucleotide Sequences


RefSeq Transcripts	XM_008973768	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034935185	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034935186	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034935187	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
	XM_034935188	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles
GenBank Nucleotide	JARIFH020000010	(Get FASTA)	NCBI Sequence Viewer	Search GEO for Microarray Profiles

RefSeq Acc Id:

XM_008973768 ⟹ XP_008972016

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	10	8,749,352 - 8,840,601 (+)	NCBI
NHGRI_mPanPan1	12	8,746,102 - 8,837,357 (+)	NCBI
Mhudiblu_PPA_v0	12	3,318,915 - 3,410,042 (+)	NCBI
PanPan1.1	12	3,248,849 - 3,334,242 (+)	NCBI

Sequence:

show sequence

CGGGGCCGGGATTTCGCAGGGAAAGCCCAGCGGTTGCAGCTGCGGCGGATCCCTCGGCACTGTC
CGCCGCGCGCCGGGGCAGCCCAGGGCCGGCGGCAGCTCCGCAAAGTCGCGGAACGAGAGGAGGC
GGAGCGCCGGCCAAGTGGTGGGGCTCAGCGCTGGGGCTGGGCTGGGCTGGGAGAGGTGTGCCCA
GGGAGCCTGGATCCCGGTGCCCTTCTCCCTCGTGTGGAGCGGCCAGTGCGGCCAGAGGCGAGCT
GACGCCCTGGAAAGAGAAATCAAATTGCAGCCTCCCCAAAGACGCTGAGTTACGCGGGCGAGCC
GGTTCCCGGGGATCGTTCGCGAGTGCGCAGAGAGCCGCGCCGCGCCGCGCCGCAGAGCCCTCCC
GGGCCCGCCGGCCAGAAGCGGGGCGCCGTCCGACAGGCAGCAGCCCCTGGGCGCGGGGTTCGGC
CGCGAGTGAGCCCCGGTGCAGAGAGGGGGCGTGCAAGGCTCCGCCGGCCCGCCCGCAGCCCGCG
CCCGACTTGGGCGCCCCCTCTGTCCCATTCTGGGAGCGATGCCCCCCGCTCCTCGCACCCCCCG
GGAACGCCGCGAGCATGGAGAAGTCGAGTAGCGAGGATTCTTCGATCCATCGGAGTCCATCTTT
GGACAGCAAGGACTCGGACTTTGCCAAGCCGTCCACCTCCGGCCGCCCGTTCGGCCGCGGCTTC
ACGGCCGGCGCCTTCTACGGCACCGCGGGCTCCCGGGGCCAGAGCCGCGCCGAGGCCGGCGTTA
AGACCGACAAGTACAATGCACCCAAAGGCAGCAAGTACGTGGTGTTTTACCTGGACCTGTCCTT
TGTGTTCCTCCTAGAATTTAAGAAGTGCAACATGGCCAGAGGCTGCCTCTGCTGCTTGAAGTAC
ATGATGTTCCTCTTCAATTTGATATTCTGGCTCTGTGGCTGTGGGCTGCTGGGAGTGGGCATCT
GGCTCTCCGTGTCCCAAGGCAACTTTGCCACCTTCTCCCCCAGCTTCCCTTCGTTGTCTGCAGC
CAACCTGGTCATCGCCATAGGCACCATTGTCATGGTGACGGGCTTCCTCGGCTGCCTGGGGGCC
ATCAAGGAAAACAAGTGCCTCCTCCTCAGCTTTTTCATCGTCCTGTTGGTCATCCTCCTAGCAG
AGCTGATCTTACTCATCCTCTTCTTTGTCTACATGGACAAGGTGAACGAGAACGCCAAGAAGGA
CCTGAAGGAAGGCCTGCTGCTGTACCACACCGAGAACAACGTGGGGCTGAAGAACGCCTGGAAC
ATCATCCAGGCTGAGATGCGATGCTGTGGTGTCACTGACTACACAGACTGGTACCCAGTGCTGG
GGGAGAACACGGTTCCCGACCGCTGCTGCATGGAGAACTCCCAGGGCTGCGGGCGCAATGCCAC
CACGCCTTTGTGGAGAACGGGCTGCTATGAAAAGCTGAAGATGTGGTTCGATGACAATAAGCAC
GTGCTGGGCACGGTGGGGATGTGCATCCTCATCATGCAGATCCTGGGCATGGCCTTCTCCATGA
CCCTCTTCCAGCACATCCACCGGACTGGTAAGAAGTACGACGCATGAGCGGGCTGGCCGGGAGT
GCCCACCCCGCCCTGCTGCCCTGTGGAGGGAAGAGGATTGAGCTTTGTGTCGCCTGCCTGCACT
CTCCAGATATGACCCCTGCACCCACCCCCCACAGCCTGCCCTACCCCACCTACCCTGCCTCAGC
CTCGGACTTCTCAGTGGGTGGAGTGCCAGGGAGGAGGAGGCACACGGAGACCTGGGGCTCGGGG
CCCCTGGATTCCTGCATCTGCATATGCGTATTTGCCAAAGACGACAGGGTGGGCTGGGGTGCGC
TCAGGAGGAACCCCCAGCACTGATGGGCTTCTGCCCCTGCCCTTCCTCACACTGACACTTTGTC
CCCACATGGGGTGGGGAGCAGAGTGCCCGCCCCGTGGAGATACCGCCCCAGCGGGGGGTGCCAC
CATGGGGCACCTGGCGGGGCGGGGGTCTGCCGGCCTCTGGGCAAGGCCCCTGGAGCATCTCGCC
CAGGCTTTTTATACCTTACAATGTAACTTTTTTATTTTATTTTACTCTATGATTATTCAGGAAT
ATTATCTCTCAGATAAGTTTAGGGTTAGATTTCTGATTTGTAACTTTTTACTGTGTTGATTTCT
TTAATGGTTTGACTTTTTTCCCCTGAGGGTGAGGGATGGGTGGGAAGAGAGGACATCTGTCCAG
TCTCTATCAGGACAGACCACCGTGCGACACCCAGGAGGCTCTCGGATGGGGCGCGCCTGCGCCC
TCAGAACGTGTGGGAAGAAGGGGGCGTGGACAGGACACGGGACCTTGCCAGGCCTGGTGTCTGA
GGACAGGAGCCTGGGAGAGGCGGGTGGAGCGTGAAGCAGGCTGGAGGTGCCCCTGCACGGGAGG
TGGGGTTTGCTAACCAATCGAGCTGGAAATGCCAGGGCAGGGGGGCCCCACGGTGCTGTGGCAG
AGCTAGAGGGGTCCTTAGACTTTTCACTGATGAGCAGTTGTTGGTTTTTTCTTTCTTCCTTCCT
CCCGCTCTCTGCTGGCACTCGAGGCTTCCCCTTCCACCCCATGTGGGTATTCCCACAACAGGTT
CTGCACACCCCAGTTATTTCACAGACATTCCTGCTAGAAACTGTCAGACAAATACCTCTCTAGT
TCGGATGCTGCTCACTTTCTCCCTTGCTTCTGGAAGGGGAAGCAGTCCTTAGGTTTTGCTGTGC
TGGGACAGTGGCAGGGGACCCACAGGGGTGAGGACCCACGGTCCTCCCCACCAGCCTTGCTCAG
CTGTGGGTTGCCCTGCTGGGAAGGAGGGAATCACGTCCACCTGGGTCCCAAGATCTTCGCCTCC
TTCCCTGGGGCCATGGACATCAGCAGTGGGTTGGGTGGCGATTATATCATCTGTGATCCCAAGG
AGAAGAAATACAGAAAACCCAAGAGAGGTCAGACTGGCTCTTGTTGCCGGAGCCACGGGAAGAA
AGCAGCTGGAGTCACGCACGTGCAGAGCTGGGCCTGGGAGAGAAACGGGCTGGGGAGTGAGGCC
AGGAGTGGGATTCAGCTGCAGCAGGGCGCCCCCTCCAAACTGCAGCTGGTCTGGCTTACTGTTT
TGCCGTTCAAAAAGGTCGCGAATCCGTGGGACTGAGCACGGGGACCTCACCCGCTAGCCAGCGT
CTGCTGCACTTGATCAGGTGGGACCTTGGTGGGCGGCTGCCTTTCCTATACAGTTTGTCTTGTC
ACCCTGGTTTCCCACTGGGGCCAGGTCTCTTCTCCAGCCTCCACCTGCCTGTCTGATCCAAGAG
CTGAGACACGGCCACCCAGCACCAGTCACTCCTCTGTTCACCTTAAGTAACACACAAATCGGGA
ACAGGAGGACAGAACCGTTGGCATTATCAGGATTCGTGTTTTGCGGGGGTGGGAGTGGAGAGTA
GGGTGGTCTTGTGAGTTGGGCAGGGTAAAGACCGCTTCCCTGAGACAGGGGCAGTGGTGCTGAT
GGAACGCGGGGGAGGCCCACATTTGAGCAAAGCTGCCCTGCCCTTGTCCCCTGGCCTGGCTTCC
TGGTAAGGAGTTTCAGCCGCCTCCGCAGGAACCCCCAAAGTGCAGGTTCCGGAGCAGACACATC
TGGGCGGAGAGACTCAGCACACAAGTGCTGCAGTTGCACGGTGGGACCCGAGGCCTCGTGCGTT
TTTTGCTGTGGGTGGGGTGGGTGGGTTGGTTTATGCCTATCAATGCAATTTTTAATTTTTGTTA
ATATCAACAGCAAAAGCCTAGTGCATTGGGAGATGTGCAACCTCCCTGAAAATCTTTTCTGTTT
CTGGAGTGCTTCAGGGGTGGCCTCTGGCCCCAGAGCCTTTGCCGCAGTGCCCCCACCAGCCCCC
ACCTCATCCGTCTGTTTGCAGAGCCTCATCTACAGGACCCCACGCTGCCTTCTTTACTCACTCT
GCGCTTGGCCGTTTTGTTATTTGGCTTAGTCTACATTGGGCGGGAGTCTGTGTGCACAGAGTGG
GTGTTCCTCCAAGCCCCTTCCGCTCAGAGGGCCACACCCAGCGATGCCAGTGAAGGTGGCACAG
CCTCTCTTCAGTTTCTCCTGACTGTGATCTCACTGGGGCAGAATTCCCCTGAGAGAATTCCCTC
ACTCACGGCTCCCTTTGCCAGAGTTAGTTCAATCAGGTCTGATGTGAGCAATTTACACACTTGT
CTCAGAAAGTCCCTCAGGGTTTGTAGAGGACTGCAGGGGGGCATCCGCTGCAGACTCAGCCTTT
CTCTGCAGCCATCCTGCAGCGGGGGTGAGCGGGCACAGGCTGAGAACTGCTCTTGGGTGGTGGA
AGCAGGTGTCACGGTGCAAGTCTCCCCCTGCACCCCTCCCCCAGCTTGAGCCGTGTCACCCCCT
CTCCCTCCAGCATGGGCCTGCGTCTCAGGCTCTCTGGAAGGCAGCCCTGCCCCGGACCCTCTTG
CAGGTGTCCTGGTTTGACTTGGAACTAGGTGGCCATCTTTCCAGGCTTTGGTGGCCCAAGAGCA
GTCTGGGTGGATGGAAGTGGCTGTCCCCTCCTCTCCAGCCCCTGCCCACCCACTGGTGGAGGTG
CTAACTAGCAGGGACGTGGCATAGGATGGGAGCTGGGCGTGAGGTGCTTGGGGTCCATTCTTTG
TCCCTCAGCTTCTCAGAGTCCGGCCAGCCCTTGTGTTCCCGTGCCCCCCACTTTCCTCCTCCCC
ACTGCAGTGAGGCAATAGTCCAGGGTGGGGCCTGGCCTCCCTGCCCTGATTGGGGACTCAGGAG
GTGAGGCCTGGGGAGCTTCCTGCCCCCTCTTTGCCCACCTGCCTGCCCCCGGGCAGCACGGGAG
GGAGAGCAGGGTGAGCACGCTTGTTGGTTTCAGATGCACTTTCTGCTTGCAATGCCGTATCTGT
GCGTTCCTTCATCCTGGTCCTGGCTTTATGGAACACCATGTTTTTAGCATGTTTTTAAATAAAA
ACGGATAAAGTGTCAAAAGCA

hide sequence

RefSeq Acc Id:

XM_034935185 ⟹ XP_034791076

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	10	8,628,910 - 8,840,601 (+)	NCBI
NHGRI_mPanPan1	12	8,625,681 - 8,837,357 (+)	NCBI
Mhudiblu_PPA_v0	12	3,198,483 - 3,410,042 (+)	NCBI

RefSeq Acc Id:

XM_034935187 ⟹ XP_034791078

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	10	8,628,890 - 8,840,601 (+)	NCBI
NHGRI_mPanPan1	12	8,625,658 - 8,837,357 (+)	NCBI
Mhudiblu_PPA_v0	12	3,198,465 - 3,410,042 (+)	NCBI

RefSeq Acc Id:

XM_034935188 ⟹ XP_034791079

Type:

CODING

Position:

Bonobo Assembly	Chr	Position (strand)	Source
NHGRI_mPanPan1-v2	10	8,608,855 - 8,840,601 (+)	NCBI
NHGRI_mPanPan1	12	8,607,257 - 8,837,357 (+)	NCBI
Mhudiblu_PPA_v0	12	3,191,654 - 3,410,042 (+)	NCBI

Protein Sequences


Protein RefSeqs	XP_008972016	(Get FASTA)	NCBI Sequence Viewer
	XP_034791076	(Get FASTA)	NCBI Sequence Viewer
	XP_034791078	(Get FASTA)	NCBI Sequence Viewer
	XP_034791079	(Get FASTA)	NCBI Sequence Viewer
Ensembl Protein	ENSPPAP00000022403.1

RefSeq Acc Id:

XP_008972016 ⟸ XM_008973768

- Peptide Label:

isoform X1

- Sequence:

show sequence

MEKSSSEDSSIHRSPSLDSKDSDFAKPSTSGRPFGRGFTAGAFYGTAGSRGQSRAEAGVKTDKY
NAPKGSKYVVFYLDLSFVFLLEFKKCNMARGCLCCLKYMMFLFNLIFWLCGCGLLGVGIWLSVS
QGNFATFSPSFPSLSAANLVIAIGTIVMVTGFLGCLGAIKENKCLLLSFFIVLLVILLAELILL
ILFFVYMDKVNENAKKDLKEGLLLYHTENNVGLKNAWNIIQAEMRCCGVTDYTDWYPVLGENTV
PDRCCMENSQGCGRNATTPLWRTGCYEKLKMWFDDNKHVLGTVGMCILIMQILGMAFSMTLFQH
IHRTGKKYDA

hide sequence

RefSeq Acc Id:	XP_034791079 ⟸ XM_034935188
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_034791078 ⟸ XM_034935187
- Peptide Label:	isoform X2

RefSeq Acc Id:	XP_034791076 ⟸ XM_034935185
- Peptide Label:	isoform X2

Additional Information

External Database Links

Database	Acc Id	Source(s)
Ensembl Genes	ENSPPAG00000034393	UniProtKB/TrEMBL
Ensembl Transcript	ENSPPAT00000045213.1	UniProtKB/TrEMBL
Gene3D-CATH	1.10.1450.10	UniProtKB/TrEMBL
InterPro	Tetraspanin/Peripherin	UniProtKB/TrEMBL
	Tetraspanin_CS	UniProtKB/TrEMBL
	Tetraspanin_EC2_sf	UniProtKB/TrEMBL
KEGG Report	pps:100994524	UniProtKB/TrEMBL
NCBI Gene	TSPAN9	ENTREZGENE
PANTHER	PTHR19282	UniProtKB/TrEMBL
	TETRASPANIN-9	UniProtKB/TrEMBL
Pfam	Tetraspanin	UniProtKB/TrEMBL
PRINTS	TMFOUR	UniProtKB/TrEMBL
PROSITE	TM4_1	UniProtKB/TrEMBL
Superfamily-SCOP	SSF48652	UniProtKB/TrEMBL
UniProt	A0A2R9AZD6_PANPA	UniProtKB/TrEMBL

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Imported Disease Annotations - ClinVar