VASP (vasodilator stimulated phosphoprotein) - Rat Genome Database

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Gene: VASP (vasodilator stimulated phosphoprotein) Pan paniscus
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Symbol: VASP
Name: vasodilator stimulated phosphoprotein
RGD ID: 11702571
Description: ENCODES a protein that exhibits actin binding (inferred); profilin binding (inferred); SH3 domain binding (inferred); INVOLVED IN actin cytoskeleton organization (ortholog); axon guidance (ortholog); neural tube closure (ortholog); PARTICIPATES IN E-cadherin signaling pathway; ASSOCIATED WITH Experimental Liver Cirrhosis (ortholog); FOUND IN glutamatergic synapse (ortholog); postsynapse (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: vasodilator-stimulated phosphoprotein
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22051,668,472 - 51,688,796 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11953,540,746 - 53,560,217 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01942,457,222 - 42,476,688 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11951,053,567 - 51,072,551 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1951,053,567 - 51,072,553 (+)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Disease Annotations     Click to see Annotation Detail View

Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

Molecular Pathway Annotations     Click to see Annotation Detail View
References
Additional References at PubMed
PMID:22301074   PMID:30032202  


Genomics

Comparative Map Data
VASP
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v22051,668,472 - 51,688,796 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11953,540,746 - 53,560,217 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v01942,457,222 - 42,476,688 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.11951,053,567 - 51,072,551 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl1951,053,567 - 51,072,553 (+)Ensemblpanpan1.1panPan2
VASP
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh381945,507,479 - 45,526,983 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl1945,506,579 - 45,526,989 (+)EnsemblGRCh38hg38GRCh38
GRCh371946,010,737 - 46,030,241 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 361950,702,528 - 50,722,081 (+)NCBINCBI36Build 36hg18NCBI36
Build 341950,702,527 - 50,722,078NCBI
Celera1942,816,794 - 42,836,352 (+)NCBICelera
Cytogenetic Map19q13.32NCBI
HuRef1942,440,143 - 42,459,463 (+)NCBIHuRef
CHM1_11946,013,932 - 46,033,484 (+)NCBICHM1_1
T2T-CHM13v2.01948,334,741 - 48,354,257 (+)NCBIT2T-CHM13v2.0
Vasp
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39718,990,854 - 19,005,779 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl718,990,854 - 19,005,742 (-)EnsemblGRCm39 Ensembl
GRCm38719,256,929 - 19,271,854 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl719,256,929 - 19,271,817 (-)EnsemblGRCm38mm10GRCm38
MGSCv37719,842,278 - 19,857,203 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36718,416,239 - 18,431,669 (-)NCBIMGSCv36mm8
Celera716,669,928 - 16,684,971 (-)NCBICelera
Cytogenetic Map7A3NCBI
cM Map79.51NCBI
Vasp
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8188,038,026 - 88,053,783 (-)NCBIGRCr8
mRatBN7.2178,910,009 - 78,925,791 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl178,910,011 - 78,925,061 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx184,299,066 - 84,313,957 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0192,856,629 - 92,871,541 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0186,054,149 - 86,069,040 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0180,170,608 - 80,185,882 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl180,170,619 - 80,185,882 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0181,437,091 - 81,452,900 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4178,621,494 - 78,636,762 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1178,699,598 - 78,715,028 (-)NCBI
Celera173,372,332 - 73,387,227 (-)NCBICelera
Cytogenetic Map1q21NCBI
Vasp
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_00495557421,911 - 34,197 (+)EnsemblChiLan1.0
ChiLan1.0NW_00495557421,569 - 33,705 (+)NCBIChiLan1.0ChiLan1.0
VASP
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.11110,050,154 - 110,063,125 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl1110,050,154 - 110,062,827 (-)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha1109,534,415 - 109,547,108 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.01110,582,754 - 110,595,760 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl1110,582,757 - 110,595,733 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.11110,258,575 - 110,271,274 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.01109,892,681 - 109,905,376 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.01110,762,040 - 110,774,746 (-)NCBIUU_Cfam_GSD_1.0
LOC101973767
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_02440934917,575,109 - 17,597,696 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049367061,923,602 - 1,928,630 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049367061,923,172 - 1,945,046 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
VASP
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl651,872,812 - 51,886,724 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.1651,872,810 - 51,886,729 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
VASP
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1638,954,212 - 38,974,680 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl638,954,014 - 38,975,108 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366607318,575,539 - 18,596,231 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Vasp
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046248327,619,134 - 7,630,943 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046248327,619,211 - 7,631,576 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression

RNA-SEQ Expression


Sequence


Ensembl Acc Id: ENSPPAT00000050905   ⟹   ENSPPAP00000028061
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl1951,053,567 - 51,072,553 (+)Ensembl
RefSeq Acc Id: XM_003817515   ⟹   XP_003817563
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22051,669,071 - 51,688,796 (+)NCBI
NHGRI_mPanPan11953,540,749 - 53,560,217 (+)NCBI
Mhudiblu_PPA_v01942,457,224 - 42,476,688 (+)NCBI
PanPan1.11951,053,567 - 51,072,551 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008970731   ⟹   XP_008968979
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22051,668,472 - 51,688,796 (+)NCBI
NHGRI_mPanPan11953,540,747 - 53,560,217 (+)NCBI
Mhudiblu_PPA_v01942,457,223 - 42,476,688 (+)NCBI
PanPan1.11951,053,567 - 51,072,551 (+)NCBI
Sequence:
RefSeq Acc Id: XM_008970732   ⟹   XP_008968980
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22051,669,310 - 51,688,796 (+)NCBI
NHGRI_mPanPan11953,540,746 - 53,560,217 (+)NCBI
Mhudiblu_PPA_v01942,457,222 - 42,476,688 (+)NCBI
PanPan1.11951,053,567 - 51,072,551 (+)NCBI
Sequence:
RefSeq Acc Id: XM_063600409   ⟹   XP_063456479
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v22051,669,310 - 51,688,796 (+)NCBI
Protein Sequences
Protein RefSeqs XP_003817563 (Get FASTA)   NCBI Sequence Viewer  
  XP_008968979 (Get FASTA)   NCBI Sequence Viewer  
  XP_008968980 (Get FASTA)   NCBI Sequence Viewer  
  XP_063456479 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000028061
  ENSPPAP00000028061.1
RefSeq Acc Id: XP_003817563   ⟸   XM_003817515
- Peptide Label: isoform X1
- UniProtKB: A0A2R9BN03 (UniProtKB/TrEMBL)
- Sequence:
RefSeq Acc Id: XP_008968980   ⟸   XM_008970732
- Peptide Label: isoform X3
- Sequence:
RefSeq Acc Id: XP_008968979   ⟸   XM_008970731
- Peptide Label: isoform X2
- Sequence:
Ensembl Acc Id: ENSPPAP00000028061   ⟸   ENSPPAT00000050905
RefSeq Acc Id: XP_063456479   ⟸   XM_063600409
- Peptide Label: isoform X4
Protein Domains
WH1


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000037088 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000050905.1 UniProtKB/TrEMBL
Gene3D-CATH 2.30.29.30 UniProtKB/TrEMBL
  Vasodilator-stimulated phosphoprotein UniProtKB/TrEMBL
InterPro PH-like_dom_sf UniProtKB/TrEMBL
  VASP/EVL UniProtKB/TrEMBL
  VASP_sf UniProtKB/TrEMBL
  VASP_tetra UniProtKB/TrEMBL
  WH1/EVH1_dom UniProtKB/TrEMBL
KEGG Report pps:100986884 UniProtKB/TrEMBL
NCBI Gene VASP ENTREZGENE
PANTHER PTHR11202:SF12 UniProtKB/TrEMBL
  SPROUTY-RELATED, EVH1 DOMAIN-CONTAINING PROTEIN FAMILY MEMBER UniProtKB/TrEMBL
Pfam VASP_tetra UniProtKB/TrEMBL
  WH1 UniProtKB/TrEMBL
PIRSF Vasodilator_Phospo UniProtKB/TrEMBL
PROSITE WH1 UniProtKB/TrEMBL
SMART WH1 UniProtKB/TrEMBL
Superfamily-SCOP PH domain-like UniProtKB/TrEMBL
  SSF118370 UniProtKB/TrEMBL
UniProt A0A2R9BN03 ENTREZGENE, UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2017-06-20 VASP  vasodilator stimulated phosphoprotein    vasodilator-stimulated phosphoprotein  Symbol and/or name change 5135510 APPROVED