Symbol:
NPAS3
Name:
neuronal PAS domain protein 3
RGD ID:
11700100
Description:
ENCODES a protein that exhibits protein heterodimerization activity (ortholog); INVOLVED IN locomotory behavior (ortholog); maternal behavior (ortholog); positive regulation of DNA-templated transcription (ortholog); ASSOCIATED WITH Brain-Lung-Thyroid Syndrome (ortholog); schizophrenia (ortholog); FOUND IN nucleoplasm (inferred); nucleus (inferred)
Type:
protein-coding
RefSeq Status:
MODEL
Previously known as:
neuronal PAS domain-containing protein 3
RGD Orthologs
Alliance Orthologs
More Info
more info ...
More Info
Latest Assembly:
Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 15 34,254,792 - 35,121,949 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 14 33,471,295 - 34,338,452 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 14 13,701,786 - 14,568,738 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 14 31,990,835 - 32,759,347 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 14 31,893,101 - 32,758,096 (+) Ensembl panpan1.1 panPan2
JBrowse:
View Region in Genome Browser (JBrowse)
Model
NPAS3 (Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl NHGRI_mPanPan1-v2 15 34,254,792 - 35,121,949 (+) NCBI NHGRI_mPanPan1-v2 NHGRI_mPanPan1 14 33,471,295 - 34,338,452 (+) NCBI NHGRI_mPanPan1 Mhudiblu_PPA_v0 14 13,701,786 - 14,568,738 (+) NCBI Mhudiblu_PPA_v0 Mhudiblu_PPA_v0 panPan3 PanPan1.1 14 31,990,835 - 32,759,347 (+) NCBI panpan1.1 PanPan1.1 panPan2 PanPan1.1 Ensembl 14 31,893,101 - 32,758,096 (+) Ensembl panpan1.1 panPan2
NPAS3 (Homo sapiens - human)
Human Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCh38 14 32,934,785 - 33,804,173 (+) NCBI GRCh38 GRCh38 hg38 GRCh38 GRCh38.p14 Ensembl 14 32,934,396 - 33,820,863 (+) Ensembl GRCh38 hg38 GRCh38 GRCh37 14 33,408,085 - 34,273,379 (+) NCBI GRCh37 GRCh37 hg19 GRCh37 Build 36 14 32,478,200 - 33,340,702 (+) NCBI NCBI36 Build 36 hg18 NCBI36 Build 34 14 32,478,273 - 33,340,066 NCBI Celera 14 13,273,962 - 14,138,956 (+) NCBI Celera Cytogenetic Map 14 q13.1 NCBI HuRef 14 13,641,962 - 14,390,327 (+) NCBI HuRef CHM1_1 14 33,407,064 - 34,271,980 (+) NCBI CHM1_1 T2T-CHM13v2.0 14 27,131,685 - 28,001,533 (+) NCBI T2T-CHM13v2.0
Npas3 (Mus musculus - house mouse)
Mouse Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCm39 12 53,294,874 - 54,118,956 (+) NCBI GRCm39 GRCm39 mm39 GRCm39 Ensembl 12 53,294,940 - 54,118,958 (+) Ensembl GRCm39 Ensembl GRCm38 12 53,248,026 - 54,072,173 (+) NCBI GRCm38 GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 12 53,248,677 - 54,072,175 (+) Ensembl GRCm38 mm10 GRCm38 GRCm38.p6 Ensembl 12 53,248,157 - 54,072,175 (+) Ensembl GRCm38 mm10 GRCm38 MGSCv37 12 54,349,664 - 55,173,162 (+) NCBI GRCm37 MGSCv37 mm9 NCBIm37 MGSCv36 12 54,170,303 - 54,990,700 (+) NCBI MGSCv36 mm8 Celera 12 54,549,790 - 55,376,477 (+) NCBI Celera Cytogenetic Map 12 C1 NCBI cM Map 12 22.31 NCBI
Npas3 (Rattus norvegicus - Norway rat)
Rat Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl GRCr8 6 76,438,064 - 77,263,185 (+) NCBI GRCr8 mRatBN7.2 6 70,702,773 - 71,527,928 (+) NCBI mRatBN7.2 mRatBN7.2 mRatBN7.2 Ensembl 6 70,703,170 - 71,524,884 (+) Ensembl mRatBN7.2 Ensembl Rnor_6.0 6 74,081,995 - 74,913,025 (+) NCBI Rnor6.0 Rnor_6.0 rn6 Rnor6.0 Rnor_5.0 6 83,635,089 - 84,459,466 (+) NCBI Rnor5.0 Rnor_5.0 rn5 Rnor5.0 RGSC_v3.4 6 74,192,110 - 74,209,762 (+) NCBI RGSC3.4 RGSC_v3.4 rn4 RGSC3.4 RGSC_v3.1 6 74,075,148 - 74,329,176 (+) NCBI Celera 6 69,567,922 - 70,382,732 (+) NCBI Celera Cytogenetic Map 6 q23 NCBI
Npas3 (Chinchilla lanigera - long-tailed chinchilla)
Chinchilla Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl ChiLan1.0 Ensembl NW_004955409 27,137,667 - 27,975,282 (-) Ensembl ChiLan1.0 ChiLan1.0 NW_004955409 27,134,610 - 27,975,282 (-) NCBI ChiLan1.0 ChiLan1.0
NPAS3 (Canis lupus familiaris - dog)
Dog Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl CanFam3.1 8 11,959,895 - 12,799,448 (+) NCBI CanFam3.1 CanFam3.1 canFam3 CanFam3.1 Dog10K_Boxer_Tasha 8 11,763,424 - 12,608,564 (+) NCBI Dog10K_Boxer_Tasha ROS_Cfam_1.0 8 12,062,501 - 12,903,397 (+) NCBI ROS_Cfam_1.0 ROS_Cfam_1.0 Ensembl 8 12,061,655 - 12,900,182 (+) Ensembl ROS_Cfam_1.0 Ensembl UMICH_Zoey_3.1 8 11,746,047 - 12,585,489 (+) NCBI UMICH_Zoey_3.1 UNSW_CanFamBas_1.0 8 11,827,729 - 12,667,988 (+) NCBI UNSW_CanFamBas_1.0 UU_Cfam_GSD_1.0 8 12,112,108 - 12,957,329 (+) NCBI UU_Cfam_GSD_1.0
Npas3 (Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl HiC_Itri_2 NW_024408640 43,803,562 - 44,639,066 (+) NCBI HiC_Itri_2 SpeTri2.0 Ensembl NW_004936494 7,310,005 - 8,143,610 (+) Ensembl SpeTri2.0 SpeTri2.0 Ensembl SpeTri2.0 NW_004936494 7,965,156 - 8,144,244 (+) NCBI SpeTri2.0 SpeTri2.0 SpeTri2.0
NPAS3 (Sus scrofa - pig)
Pig Assembly Chr Position (strand) Source Genome Browsers JBrowse NCBI UCSC Ensembl Sscrofa11.1 Ensembl 7 65,928,075 - 66,800,991 (-) Ensembl Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa11.1 7 65,924,986 - 66,800,820 (-) NCBI Sscrofa11.1 Sscrofa11.1 susScr11 Sscrofa11.1 Sscrofa10.2 7 70,862,116 - 70,974,873 (-) NCBI Sscrofa10.2 Sscrofa10.2 susScr3
Npas3 (Heterocephalus glaber - naked mole-rat)
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Click on a value in the shaded box below the category label to view a detailed expression data table for that system.
Ensembl Acc Id:
ENSPPAT00000032411 ⟹ ENSPPAP00000009768
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source PanPan1.1 Ensembl 14 31,893,101 - 32,758,096 (+) Ensembl
Ensembl Acc Id:
ENSPPAT00000032420 ⟹ ENSPPAP00000009776
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source PanPan1.1 Ensembl 14 32,173,260 - 32,758,096 (+) Ensembl
Ensembl Acc Id:
ENSPPAT00000032425 ⟹ ENSPPAP00000009781
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source PanPan1.1 Ensembl 14 32,324,848 - 32,638,957 (+) Ensembl
RefSeq Acc Id:
XM_034937407 ⟹ XP_034793298
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 15 34,254,792 - 35,121,949 (+) NCBI NHGRI_mPanPan1 14 33,471,295 - 34,338,452 (+) NCBI Mhudiblu_PPA_v0 14 13,701,786 - 14,567,006 (+) NCBI
RefSeq Acc Id:
XM_034937408 ⟹ XP_034793299
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 15 34,254,792 - 35,121,949 (+) NCBI NHGRI_mPanPan1 14 33,471,295 - 34,338,452 (+) NCBI Mhudiblu_PPA_v0 14 13,701,786 - 14,567,006 (+) NCBI
RefSeq Acc Id:
XM_034937409 ⟹ XP_034793300
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 15 34,254,792 - 35,121,949 (+) NCBI NHGRI_mPanPan1 14 33,471,295 - 34,338,452 (+) NCBI Mhudiblu_PPA_v0 14 13,701,786 - 14,567,006 (+) NCBI
RefSeq Acc Id:
XM_034937410 ⟹ XP_034793301
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 15 34,254,792 - 35,121,949 (+) NCBI NHGRI_mPanPan1 14 33,471,295 - 34,338,452 (+) NCBI Mhudiblu_PPA_v0 14 13,701,786 - 14,567,006 (+) NCBI
RefSeq Acc Id:
XM_034937411 ⟹ XP_034793302
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 15 34,254,792 - 35,121,949 (+) NCBI NHGRI_mPanPan1 14 33,471,295 - 34,338,452 (+) NCBI Mhudiblu_PPA_v0 14 13,701,786 - 14,567,006 (+) NCBI
RefSeq Acc Id:
XM_034937412 ⟹ XP_034793303
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 15 34,258,809 - 35,121,949 (+) NCBI NHGRI_mPanPan1 14 33,475,312 - 34,338,452 (+) NCBI Mhudiblu_PPA_v0 14 13,705,808 - 14,568,738 (+) NCBI
RefSeq Acc Id:
XM_034937413 ⟹ XP_034793304
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 15 34,258,809 - 35,121,949 (+) NCBI NHGRI_mPanPan1 14 33,475,312 - 34,338,452 (+) NCBI Mhudiblu_PPA_v0 14 13,705,808 - 14,568,738 (+) NCBI
RefSeq Acc Id:
XM_034937415 ⟹ XP_034793306
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 15 34,258,809 - 35,121,949 (+) NCBI NHGRI_mPanPan1 14 33,475,312 - 34,338,452 (+) NCBI Mhudiblu_PPA_v0 14 13,705,808 - 14,568,738 (+) NCBI
RefSeq Acc Id:
XM_055097464 ⟹ XP_054953439
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 15 34,254,792 - 35,121,949 (+) NCBI NHGRI_mPanPan1 14 33,471,295 - 34,338,452 (+) NCBI
RefSeq Acc Id:
XM_055097465 ⟹ XP_054953440
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 15 34,254,792 - 35,121,949 (+) NCBI NHGRI_mPanPan1 14 33,471,295 - 34,338,452 (+) NCBI
RefSeq Acc Id:
XM_057299681 ⟹ XP_057155664
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 15 34,258,809 - 35,121,949 (+) NCBI NHGRI_mPanPan1 14 33,475,312 - 34,338,452 (+) NCBI
RefSeq Acc Id:
XM_057299682 ⟹ XP_057155665
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 15 34,258,809 - 35,121,949 (+) NCBI NHGRI_mPanPan1 14 33,475,312 - 34,338,452 (+) NCBI
RefSeq Acc Id:
XM_057299683 ⟹ XP_057155666
Type:
CODING
Position:
Bonobo Assembly Chr Position (strand) Source NHGRI_mPanPan1-v2 15 34,258,809 - 35,121,949 (+) NCBI NHGRI_mPanPan1 14 33,475,312 - 34,338,452 (+) NCBI
RefSeq Acc Id:
XP_034793298 ⟸ XM_034937407
- Peptide Label:
isoform X1
- UniProtKB:
A0A2R9A1G7 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_034793299 ⟸ XM_034937408
- Peptide Label:
isoform X3
- UniProtKB:
A0A2R9A1G7 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_034793300 ⟸ XM_034937409
- Peptide Label:
isoform X4
- UniProtKB:
A0A2R9A1G7 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_034793301 ⟸ XM_034937410
- Peptide Label:
isoform X5
- UniProtKB:
A0A2R9A1G7 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_034793302 ⟸ XM_034937411
- Peptide Label:
isoform X7
- UniProtKB:
A0A2R8ZXT8 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_034793303 ⟸ XM_034937412
- Peptide Label:
isoform X8
- UniProtKB:
A0A2R9A1G7 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_034793304 ⟸ XM_034937413
- Peptide Label:
isoform X9
- UniProtKB:
A0A2R8ZXT8 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_034793306 ⟸ XM_034937415
- Peptide Label:
isoform X11
- UniProtKB:
A0A2R8ZXT8 (UniProtKB/TrEMBL)
Ensembl Acc Id:
ENSPPAP00000009768 ⟸ ENSPPAT00000032411
Ensembl Acc Id:
ENSPPAP00000009781 ⟸ ENSPPAT00000032425
Ensembl Acc Id:
ENSPPAP00000009776 ⟸ ENSPPAT00000032420
RefSeq Acc Id:
XP_054953439 ⟸ XM_055097464
- Peptide Label:
isoform X2
- UniProtKB:
A0A2R9A1G7 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_054953440 ⟸ XM_055097465
- Peptide Label:
isoform X6
- UniProtKB:
A0A2R9A1G7 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_057155664 ⟸ XM_057299681
- Peptide Label:
isoform X10
- UniProtKB:
A0A2R8ZXT8 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_057155666 ⟸ XM_057299683
- Peptide Label:
isoform X13
- UniProtKB:
A0A2R8ZXT8 (UniProtKB/TrEMBL)
RefSeq Acc Id:
XP_057155665 ⟸ XM_057299682
- Peptide Label:
isoform X12
- UniProtKB:
A0A2R8ZXT8 (UniProtKB/TrEMBL)