DIPK1A (divergent protein kinase domain 1A) - Rat Genome Database

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Gene: DIPK1A (divergent protein kinase domain 1A) Pan paniscus
Analyze
Symbol: DIPK1A
Name: divergent protein kinase domain 1A
RGD ID: 11668232
Description: ASSOCIATED WITH aplastic anemia (ortholog); congenital hypoplastic anemia (ortholog); Diamond-Blackfan anemia (ortholog); FOUND IN endoplasmic reticulum (inferred); endoplasmic reticulum membrane (inferred); membrane (inferred)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: FAM69A; family with sequence similarity 69 member A
RGD Orthologs
Human
Mouse
Rat
Chinchilla
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: Mhudiblu_PPA_v0 - Bonobo Mhudiblu_PPA_v0 Assembly
Position:
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21134,054,716 - 134,178,770 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11133,209,618 - 133,334,845 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0195,507,241 - 95,631,286 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1194,241,754 - 94,275,864 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl194,232,632 - 94,275,864 (-)Ensemblpanpan1.1panPan2
JBrowse: View Region in Genome Browser (JBrowse)
Model


Gene Ontology Annotations     Click to see Annotation Detail View

Cellular Component

Molecular Function

References

Genomics

Comparative Map Data
DIPK1A
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v21134,054,716 - 134,178,770 (+)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan11133,209,618 - 133,334,845 (+)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v0195,507,241 - 95,631,286 (-)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.1194,241,754 - 94,275,864 (-)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl194,232,632 - 94,275,864 (-)Ensemblpanpan1.1panPan2
DIPK1A
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh38192,832,729 - 92,961,462 (-)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl192,832,737 - 92,961,522 (-)EnsemblGRCh38hg38GRCh38
GRCh37193,298,286 - 93,427,019 (-)NCBIGRCh37GRCh37hg19GRCh37
Build 36193,071,041 - 93,199,601 (-)NCBINCBI36Build 36hg18NCBI36
Celera191,561,313 - 91,696,457 (-)NCBICelera
Cytogenetic Map1p22.1NCBI
HuRef191,419,451 - 91,464,002 (-)NCBIHuRef
CHM1_1193,413,084 - 93,541,861 (-)NCBICHM1_1
T2T-CHM13v2.0192,677,871 - 92,806,635 (-)NCBIT2T-CHM13v2.0
Dipk1a
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm395108,055,908 - 108,134,943 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl5108,055,919 - 108,134,951 (-)EnsemblGRCm39 Ensembl
GRCm385107,908,042 - 107,987,077 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl5107,908,053 - 107,987,085 (-)EnsemblGRCm38mm10GRCm38
MGSCv375108,337,061 - 108,416,096 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv365108,148,640 - 108,227,335 (-)NCBIMGSCv36mm8
Celera5105,020,900 - 105,105,133 (-)NCBICelera
Cytogenetic Map5FNCBI
cM Map552.23NCBI
Dipk1a
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8141,917,353 - 1,988,188 (+)NCBIGRCr8
mRatBN7.2141,772,412 - 1,843,508 (+)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl141,772,422 - 1,843,743 (+)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx141,651,319 - 1,722,153 (+)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0142,953,097 - 3,023,933 (+)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0141,649,782 - 1,720,622 (+)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.0142,789,699 - 2,860,354 (+)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl142,789,650 - 2,860,333 (+)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0142,789,914 - 2,860,569 (+)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.4142,326,255 - 2,397,029 (+)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.1142,360,262 - 2,397,579 (+)NCBI
Celera141,847,445 - 1,863,186 (+)NCBICelera
Cytogenetic Map14p22NCBI
Dipk1a
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0 EnsemblNW_0049554231,710,257 - 1,748,651 (+)EnsemblChiLan1.0
ChiLan1.0NW_0049554231,651,562 - 1,748,651 (+)NCBIChiLan1.0ChiLan1.0
DIPK1A
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1656,134,770 - 56,206,943 (+)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
CanFam3.1 Ensembl656,174,719 - 56,205,741 (+)EnsemblCanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha658,791,822 - 58,904,822 (+)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0656,466,920 - 56,582,920 (+)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl656,466,920 - 56,585,480 (+)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1656,146,580 - 56,262,555 (+)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0656,124,677 - 56,240,613 (+)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0656,584,362 - 56,700,598 (+)NCBIUU_Cfam_GSD_1.0
Dipk1a
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024405058102,606,191 - 102,713,196 (-)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_0049365376,234,814 - 6,341,777 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_0049365376,234,773 - 6,341,782 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
DIPK1A
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl4124,229,560 - 124,359,195 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.14124,229,414 - 124,359,339 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.24135,970,865 - 135,982,289 (+)NCBISscrofa10.2Sscrofa10.2susScr3
DIPK1A
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.12040,298,048 - 40,416,324 (+)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl2040,298,090 - 40,415,123 (+)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_02366603377,600,048 - 77,723,124 (-)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Dipk1a
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla 1.0NW_0046247424,863,045 - 4,972,977 (+)NCBIHetGla_female_1.0HetGla 1.0hetGla2


Expression


Sequence

Nucleotide Sequences
RefSeq Transcripts XM_034931241 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles
GenBank Nucleotide JARIFH020000001 (Get FASTA)   NCBI Sequence Viewer   Search GEO for Microarray Profiles

Reference Sequences
RefSeq Acc Id: ENSPPAT00000065768   ⟹   ENSPPAP00000042836
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl194,232,632 - 94,275,699 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000065770   ⟹   ENSPPAP00000042838
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl194,241,754 - 94,275,864 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000065771   ⟹   ENSPPAP00000042839
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl194,242,338 - 94,275,732 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000065773   ⟹   ENSPPAP00000042841
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl194,242,967 - 94,275,732 (-)Ensembl
RefSeq Acc Id: ENSPPAT00000065774   ⟹   ENSPPAP00000042842
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
PanPan1.1 Ensembl194,242,967 - 94,252,124 (-)Ensembl
RefSeq Acc Id: XM_034931241   ⟹   XP_034787132
Type: CODING
Position:
Bonobo AssemblyChrPosition (strand)Source
NHGRI_mPanPan1-v21134,054,716 - 134,178,770 (+)NCBI
NHGRI_mPanPan11133,209,618 - 133,334,845 (+)NCBI
Mhudiblu_PPA_v0195,507,241 - 95,631,286 (-)NCBI
Protein Sequences
Protein RefSeqs XP_034787132 (Get FASTA)   NCBI Sequence Viewer  
Ensembl Protein ENSPPAP00000042836.1
  ENSPPAP00000042838.1
  ENSPPAP00000042839.1
  ENSPPAP00000042841.1
  ENSPPAP00000042842.1
Reference Protein Sequences
RefSeq Acc Id: XP_034787132   ⟸   XM_034931241
- UniProtKB: A0A2R9CNM2 (UniProtKB/TrEMBL)
RefSeq Acc Id: ENSPPAP00000042836   ⟸   ENSPPAT00000065768
RefSeq Acc Id: ENSPPAP00000042841   ⟸   ENSPPAT00000065773
RefSeq Acc Id: ENSPPAP00000042839   ⟸   ENSPPAT00000065771
RefSeq Acc Id: ENSPPAP00000042838   ⟸   ENSPPAT00000065770
RefSeq Acc Id: ENSPPAP00000042842   ⟸   ENSPPAT00000065774
Protein Domains
FAM69 N-terminal


Additional Information

Database Acc Id Source(s)
Ensembl Genes ENSPPAG00000043970 Ensembl, ENTREZGENE, UniProtKB/TrEMBL
Ensembl Transcript ENSPPAT00000065768.1 UniProtKB/TrEMBL
  ENSPPAT00000065770.1 UniProtKB/TrEMBL
  ENSPPAT00000065771.1 UniProtKB/TrEMBL
  ENSPPAT00000065773.1 UniProtKB/TrEMBL
  ENSPPAT00000065774.1 UniProtKB/TrEMBL
InterPro FAM69_kinase_dom UniProtKB/TrEMBL
  FAM69_N UniProtKB/TrEMBL
NCBI Gene FAM69A ENTREZGENE
PANTHER DIVERGENT PROTEIN KINASE DOMAIN 1A UniProtKB/TrEMBL
  UNCHARACTERIZED UniProtKB/TrEMBL
Pfam PIP49_C UniProtKB/TrEMBL
  PIP49_N UniProtKB/TrEMBL
SMART PIP49_N UniProtKB/TrEMBL
UniProt A0A2R9CLJ3_PANPA UniProtKB/TrEMBL
  A0A2R9CLK4_PANPA UniProtKB/TrEMBL
  A0A2R9CLK9_PANPA UniProtKB/TrEMBL
  A0A2R9CNM2 ENTREZGENE, UniProtKB/TrEMBL
  A0A2R9CT55_PANPA UniProtKB/TrEMBL


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2018-10-02 DIPK1A  divergent protein kinase domain 1A  FAM69A  family with sequence similarity 69 member A  Symbol and/or name change 5135510 APPROVED