LOC108352839 (uncharacterized LOC108352839) - Rat Genome Database

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Gene: LOC108352839 (uncharacterized LOC108352839) Rattus norvegicus
Analyze
Symbol: LOC108352839
Name: uncharacterized LOC108352839
RGD ID: 11381376
Description:
Type: ncrna
RefSeq Status: MODEL
Latest Assembly: mRatBN7.2 - mRatBN7.2 Assembly
Position:
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8144,744,507 - 4,749,160 (-)NCBIGRCr8
mRatBN7.2144,439,708 - 4,444,361 (-)NCBImRatBN7.2mRatBN7.2
Rnor_6.0145,502,004 - 5,506,673 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Celera144,601,234 - 4,605,903 (-)NCBICelera
Cytogenetic Map14p22NCBI
JBrowse: View Region in Genome Browser (JBrowse)
Model


References

Genomics

Variants

.
Variants in LOC108352839
1 total Variants

QTLs in Region (mRatBN7.2)
The following QTLs overlap with this region.    Full Report CSV TAB Printer Gviewer
RGD IDSymbolNameLODP ValueTraitSub TraitChrStartStopSpecies
1300114Srn2Serum renin concentration QTL 23.27blood renin amount (VT:0003349)plasma renin activity level (CMO:0000116)14381307421217635Rat
70195Mcs8Mammary carcinoma susceptibility QTL 84.28mammary gland integrity trait (VT:0010552)mammary tumor number (CMO:0000343)14381307424531477Rat
2293089Iddm31Insulin dependent diabetes mellitus QTL 314.7blood glucose amount (VT:0000188)age at onset/diagnosis of type 1 diabetes mellitus (CMO:0001140)14381307418274691Rat
2300183Bmd60Bone mineral density QTL 605.70.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)14126541967Rat
724541Niddm53Non-insulin dependent diabetes mellitus QTL 530.001blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)1438130749088978Rat
1331740Bw26Body weight QTL 263.028body mass (VT:0001259)body weight (CMO:0000012)14381307430767156Rat
634352Apr6Acute phase response QTL 63.7blood interleukin-6 amount (VT:0008595)plasma interleukin-6 level (CMO:0001927)14141131407Rat
619619Rf4Renal disease susceptibility QTL 44.10.002urine total protein amount (VT:0000032)urine protein excretion rate to body weight ratio (CMO:0001099)14132754612Rat
71115Niddm15Non-insulin dependent diabetes mellitus QTL 154.8blood glucose amount (VT:0000188)plasma glucose level (CMO:0000042)14121760611030812Rat
2300159Bmd61Bone mineral density QTL 615.30.0001femur mineral mass (VT:0010011)volumetric bone mineral density (CMO:0001553)14126541967Rat
70204Niddm20Non-insulin dependent diabetes mellitus QTL 205.10.000008blood glucose amount (VT:0000188)blood glucose level area under curve (AUC) (CMO:0000350)14121760616960180Rat


Expression

RNA-SEQ Expression


Sequence


RefSeq Acc Id: XR_001841235
Type: NON-CODING
Position:
Rat AssemblyChrPosition (strand)Source
GRCr8144,744,507 - 4,749,160 (-)NCBI
mRatBN7.2144,439,708 - 4,444,361 (-)NCBI
Rnor_6.0145,502,004 - 5,506,673 (-)NCBI
Sequence:

Additional Information

Database Acc Id Source(s)
BioCyc Gene G2FUF-16546 BioCyc
NCBI Gene LOC108352839 ENTREZGENE
PhenoGen LOC108352839 PhenoGen
RNAcentral URS0000CCF2E1 RNACentral


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2016-08-02 LOC108352839  uncharacterized LOC108352839      Symbol and Name status set to provisional 70820 PROVISIONAL