Ntng2 (netrin G2) - Rat Genome Database

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Gene: Ntng2 (netrin G2) Chinchilla lanigera
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Symbol: Ntng2
Name: netrin G2
RGD ID: 10235799
Description: INVOLVED IN axonogenesis (ortholog); modulation of chemical synaptic transmission (ortholog); postsynaptic specialization assembly (ortholog); ASSOCIATED WITH bipolar disorder (ortholog); developmental and epileptic encephalopathy (ortholog); Developmental Disabilities (ortholog); FOUND IN axon (ortholog); glutamatergic synapse (ortholog); plasma membrane (ortholog)
Type: protein-coding
RefSeq Status: MODEL
Previously known as: netrin-G2
RGD Orthologs
Human
Mouse
Rat
Bonobo
Dog
Squirrel
Pig
Green Monkey
Naked Mole-Rat
Alliance Orthologs
More Info more info ...
Latest Assembly: ChiLan1.0 - Chinchilla ChiLan1.0 Assembly
NCBI Annotation Information: Annotation category: partial on reference assembly
Position:
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555131,654,398 - 1,701,062 (+)NCBIChiLan1.0ChiLan1.0
JBrowse: View Region in Genome Browser (JBrowse)
Model


1 to 11 of 11 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ntng2Chinchilladevelopmental and epileptic encephalopathy  ISONTNG2 (Homo sapiens)8554872ClinVar Annotator: match by term: Developmental and epileptic encephalopathyClinVarPMID:28492532
Ntng2ChinchillaDevelopmental Disabilities  ISONTNG2 (Homo sapiens)8554872ClinVar Annotator: match by term: Global developmental delayClinVarPMID:31372774 and PMID:31692205
Ntng2Chinchillaearly infantile epileptic encephalopathy  ISONTNG2 (Homo sapiens)8554872ClinVar Annotator: match by term: Early infantile epileptic encephalopathyClinVarPMID:28492532
Ntng2ChinchillaEhlers-Danlos syndrome classic type 1  ISONTNG2 (Homo sapiens)8554872ClinVar Annotator: match by term: Ehlers-Danlos syndrome and classic typeClinVarPMID:28492532
Ntng2Chinchillagenetic disease  ISONTNG2 (Homo sapiens)8554872ClinVar Annotator: match by term: Inborn genetic diseasesClinVar 
Ntng2ChinchillaIntellectual Developmental Disorder with Macrocephaly, Seizures, and Speech Delay  ISONTNG2 (Homo sapiens)8554872ClinVar Annotator: match by term: Intellectual developmental disorder with macrocephaly more ...ClinVarPMID:25741868
Ntng2ChinchillaNervous System Malformations  ISONTNG2 (Homo sapiens)8554872ClinVar Annotator: match by term: Abnormality of the nervous systemClinVarPMID:25741868
Ntng2ChinchillaNEURODEVELOPMENTAL DISORDER WITH BEHAVIORAL ABNORMALITIES, ABSENT SPEECH, AND HYPOTONIA  ISONTNG2 (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorder with behavioral abnormalities more ...ClinVarPMID:25741868 more ...
Ntng2ChinchillaNEURODEVELOPMENTAL DISORDER WITH HYPOTONIA, SEIZURES, AND ABSENT LANGUAGE  ISONTNG2 (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorder with hypotonia more ...ClinVarPMID:25741868 and PMID:31668703
Ntng2ChinchillaNeurodevelopmental Disorders  ISONTNG2 (Homo sapiens)8554872ClinVar Annotator: match by term: Neurodevelopmental disorderClinVarPMID:25741868 more ...
Ntng2Chinchillaprimary coenzyme Q10 deficiency 7  ISONTNG2 (Homo sapiens)8554872ClinVar Annotator: match by term: Neonatal encephalomyopathy-cardiomyopathy-respiratory distress syndromeClinVarPMID:28492532
1 to 11 of 11 rows
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ntng2Chinchillabipolar disorder  ISONTNG2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:17507910
Ntng2Chinchillaschizophrenia  ISONTNG2 (Homo sapiens)9068941CTD Direct Evidence: marker/mechanismCTDPMID:17507910
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ntng2ChinchillaNEURODEVELOPMENTAL DISORDER WITH BEHAVIORAL ABNORMALITIES, ABSENT SPEECH, AND HYPOTONIA  ISONTNG2 (Homo sapiens)7240710 OMIM 


Cellular Component

  

Molecular Function

  
Object Symbol
Species
Term
Qualifier
Evidence
With
Reference
Notes
Source
Original Reference(s)
Ntng2Chinchillaprotein binding enablesISOUniProtKB:Q9HBW1 and UniProtKB:Q9HCJ29068941 PMID:21946559IntActPMID:21946559
Ntng2Chinchillaprotein binding enablesISOPR:Q99PH19068941 PMID:16980967MGIPMID:16980967


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Reference Title
Reference Citation
1. Transitive Annotation Pipeline Automated assignment of GO, PW and RDO ISO annotations across species


Ntng2
(Chinchilla lanigera - long-tailed chinchilla)
Chinchilla AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChiLan1.0NW_0049555131,654,398 - 1,701,062 (+)NCBIChiLan1.0ChiLan1.0
NTNG2
(Homo sapiens - human)
Human AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCh389132,161,689 - 132,244,526 (+)NCBIGRCh38GRCh38hg38GRCh38
GRCh38.p14 Ensembl9132,162,058 - 132,244,526 (+)EnsemblGRCh38hg38GRCh38
GRCh379135,037,445 - 135,119,913 (+)NCBIGRCh37GRCh37hg19GRCh37
Build 369134,031,955 - 134,108,040 (+)NCBINCBI36Build 36hg18NCBI36
Build 349132,071,687 - 132,147,773NCBI
Celera9105,579,329 - 105,660,166 (+)NCBICelera
Cytogenetic Map9q34.13NCBI
HuRef9104,531,594 - 104,612,230 (+)NCBIHuRef
CHM1_19135,187,365 - 135,268,272 (+)NCBICHM1_1
T2T-CHM13v2.09144,375,733 - 144,459,025 (+)NCBIT2T-CHM13v2.0
Ntng2
(Mus musculus - house mouse)
Mouse AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCm39229,084,738 - 29,138,111 (-)NCBIGRCm39GRCm39mm39
GRCm39 Ensembl229,084,553 - 29,143,017 (-)EnsemblGRCm39 Ensembl
GRCm38229,194,726 - 29,248,099 (-)NCBIGRCm38GRCm38mm10GRCm38
GRCm38.p6 Ensembl229,194,541 - 29,253,005 (-)EnsemblGRCm38mm10GRCm38
MGSCv37229,050,341 - 29,103,560 (-)NCBIGRCm37MGSCv37mm9NCBIm37
MGSCv36229,016,830 - 29,070,049 (-)NCBIMGSCv36mm8
Celera228,900,873 - 28,954,149 (-)NCBICelera
Cytogenetic Map2BNCBI
cM Map219.57NCBI
Ntng2
(Rattus norvegicus - Norway rat)
Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
GRCr8332,889,856 - 32,949,032 (-)NCBIGRCr8
mRatBN7.2312,492,574 - 12,551,104 (-)NCBImRatBN7.2mRatBN7.2
mRatBN7.2 Ensembl312,492,639 - 12,545,890 (-)EnsemblmRatBN7.2 Ensembl
UTH_Rnor_SHR_Utx315,566,693 - 15,620,142 (-)NCBIRnor_SHRUTH_Rnor_SHR_Utx
UTH_Rnor_SHRSP_BbbUtx_1.0324,151,669 - 24,205,123 (-)NCBIRnor_SHRSPUTH_Rnor_SHRSP_BbbUtx_1.0
UTH_Rnor_WKY_Bbb_1.0322,405,256 - 22,458,522 (-)NCBIRnor_WKYUTH_Rnor_WKY_Bbb_1.0
Rnor_6.037,742,511 - 7,800,834 (-)NCBIRnor6.0Rnor_6.0rn6Rnor6.0
Rnor_6.0 Ensembl37,742,531 - 7,796,385 (-)EnsemblRnor6.0rn6Rnor6.0
Rnor_5.0313,091,083 - 13,144,474 (-)NCBIRnor5.0Rnor_5.0rn5Rnor5.0
RGSC_v3.438,171,757 - 8,225,139 (-)NCBIRGSC3.4RGSC_v3.4rn4RGSC3.4
RGSC_v3.138,172,301 - 8,230,387 (-)NCBI
Celera37,271,739 - 7,325,057 (-)NCBICelera
Cytogenetic Map3p12NCBI
NTNG2
(Pan paniscus - bonobo/pygmy chimpanzee)
Bonobo AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
NHGRI_mPanPan1-v2117,112,493 - 7,195,435 (-)NCBINHGRI_mPanPan1-v2
NHGRI_mPanPan197,114,829 - 7,196,883 (-)NCBINHGRI_mPanPan1
Mhudiblu_PPA_v09103,281,915 - 103,362,786 (+)NCBIMhudiblu_PPA_v0Mhudiblu_PPA_v0panPan3
PanPan1.19131,917,736 - 131,999,801 (+)NCBIpanpan1.1PanPan1.1panPan2
PanPan1.1 Ensembl9131,917,760 - 131,998,107 (+)Ensemblpanpan1.1panPan2
NTNG2
(Canis lupus familiaris - dog)
Dog AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
CanFam3.1951,994,593 - 52,004,620 (-)NCBICanFam3.1CanFam3.1canFam3CanFam3.1
Dog10K_Boxer_Tasha951,259,084 - 51,328,052 (-)NCBIDog10K_Boxer_Tasha
ROS_Cfam_1.0952,887,566 - 52,956,348 (-)NCBIROS_Cfam_1.0
ROS_Cfam_1.0 Ensembl952,885,397 - 52,952,624 (-)EnsemblROS_Cfam_1.0 Ensembl
UMICH_Zoey_3.1951,667,388 - 51,736,273 (-)NCBIUMICH_Zoey_3.1
UNSW_CanFamBas_1.0951,992,390 - 52,061,523 (-)NCBIUNSW_CanFamBas_1.0
UU_Cfam_GSD_1.0952,078,430 - 52,147,219 (-)NCBIUU_Cfam_GSD_1.0
Ntng2
(Ictidomys tridecemlineatus - thirteen-lined ground squirrel)
Squirrel AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HiC_Itri_2NW_024404947199,010,942 - 199,069,718 (+)NCBIHiC_Itri_2
SpeTri2.0 EnsemblNW_00493648718,783,058 - 18,837,481 (+)EnsemblSpeTri2.0SpeTri2.0 Ensembl
SpeTri2.0NW_00493648718,779,470 - 18,838,245 (+)NCBISpeTri2.0SpeTri2.0SpeTri2.0
NTNG2
(Sus scrofa - pig)
Pig AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
Sscrofa11.1 Ensembl1272,012,112 - 272,077,018 (+)EnsemblSscrofa11.1susScr11Sscrofa11.1
Sscrofa11.11272,007,513 - 272,077,105 (+)NCBISscrofa11.1Sscrofa11.1susScr11Sscrofa11.1
Sscrofa10.21306,097,010 - 306,136,659 (+)NCBISscrofa10.2Sscrofa10.2susScr3
NTNG2
(Chlorocebus sabaeus - green monkey)
Green Monkey AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
ChlSab1.1125,897,613 - 5,978,129 (-)NCBIChlSab1.1ChlSab1.1chlSab2
ChlSab1.1 Ensembl125,899,459 - 5,972,660 (-)EnsemblChlSab1.1ChlSab1.1 EnsemblchlSab2
Vero_WHO_p1.0NW_0236660799,622,919 - 9,705,946 (+)NCBIVero_WHO_p1.0Vero_WHO_p1.0
Ntng2
(Heterocephalus glaber - naked mole-rat)
Naked Mole-Rat AssemblyChrPosition (strand)SourceGenome Browsers
JBrowseNCBIUCSCEnsembl
HetGla_female_1.0 EnsemblNW_0046247604,016,441 - 4,067,126 (-)EnsemblHetGla_female_1.0HetGla_female_1.0 EnsemblhetGla2
HetGla 1.0NW_0046247604,016,441 - 4,067,325 (-)NCBIHetGla_female_1.0HetGla 1.0hetGla2

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RefSeq Acc Id: XM_013506741   ⟹   XP_013362195
Type: CODING
Position:
Chinchilla AssemblyChrPosition (strand)Source
ChiLan1.0NW_0049555131,654,398 - 1,701,062 (+)NCBI
Sequence:
Protein RefSeqs XP_013362195 (Get FASTA)   NCBI Sequence Viewer  
RefSeq Acc Id: XP_013362195   ⟸   XM_013506741
- Sequence:



Database
Acc Id
Source(s)
NCBI Gene Ntng2 ENTREZGENE