Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

4 Annotations Found.

An association has been curated linking Cln6 and neuronal ceroid lipofuscinosis 6A in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from OMIM Disease Annotation Pipeline
  • The annotation has been inferred from sequence orthology with CLN6 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 8 RGD objects have been annotated to neuronal ceroid lipofuscinosis 6A  (DOID:0110729)
  • 8 papers in RGD have been used to annotate Cln6


    • An association has been curated linking Cln6 and neuronal ceroid lipofuscinosis 6A in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for CTD gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with CLN6 (Homo sapiens) [(EXP) inferred from experiment]
  • 8 RGD objects have been annotated to neuronal ceroid lipofuscinosis 6A  (DOID:0110729)
  • 8 papers in RGD have been used to annotate Cln6
  • Curation Notes: CTD Direct Evidence: marker/mechanism
  • Original References(s): PMID:23516525


    • An association has been curated linking Cln6 and neuronal ceroid lipofuscinosis 6A in Rattus norvegicus.        

  • The association was inferred from sequence or structural similarity (ISS)
    		•  
  • The annotation was made from RGD automated import pipeline for MGI gene-to-disease annotations
  • The annotation has been inferred from sequence or structural similarity with Cln6 (Mus musculus) [(IAGP) inferred by association of genotype and phenotype]
  • 8 RGD objects have been annotated to neuronal ceroid lipofuscinosis 6A  (DOID:0110729)
  • 8 papers in RGD have been used to annotate Cln6
  • Curation Notes: OMIM:601780


    • An association has been curated linking Cln6 and neuronal ceroid lipofuscinosis 6A in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD automated import pipeline for ClinVar variants, variant-to-disease annotations and gene-to-disease annotations
  • The annotation has been inferred from sequence orthology with CLN6 (Homo sapiens) [(IAGP) inferred by association of genotype and phenotype]
  • 8 RGD objects have been annotated to neuronal ceroid lipofuscinosis 6A  (DOID:0110729)
  • 8 papers in RGD have been used to annotate Cln6
  • Curation Notes: ClinVar Annotator: match by term: Ceroid lipofuscinosis, neuronal, 6A | ClinVar Annotator: match by term: Neuronal ceroid lipofuscinosis 6
  • Original References(s): PMID:11727201 PMID:11791207 PMID:12673792 PMID:12815591 PMID:15265688 PMID:15996215 PMID:16199547 PMID:17453415 PMID:17576681 PMID:18414213 PMID:18684116 PMID:18811591 PMID:18846690 PMID:19135028 PMID:19201763 PMID:20020536 PMID:20301601 PMID:21359198 PMID:21549341 PMID:21819394 PMID:21990111 PMID:25359263 PMID:25401298 PMID:25590979 PMID:25741868 PMID:25976102 PMID:26075876 PMID:26115733 PMID:26206375 PMID:26374131 PMID:26467025 PMID:26539891 PMID:27553520 PMID:27903347 PMID:28492532 PMID:28587997 PMID:28831385 PMID:29140481 PMID:29709712 PMID:30019023 PMID:30285654 PMID:30528883 PMID:30561534 PMID:31216804 PMID:31319225 PMID:31489614 PMID:31743419 PMID:32171521 PMID:33024953 PMID:34597687 PMID:34868216 PMID:35505348 PMID:9536098


    • Go Back to source page   Continue to Ontology report