Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)

GENE - TERM ANNOTATION REPORT

5 Annotations Found.

An association has been curated linking Park7 and protein binding in Rattus norvegicus.        

  • The association was inferred from physical interaction (IPI)
    		•  
  • The annotation was made from Jin J, etal., Mol Cell Proteomics. 2007 May;6(5):845-59. Epub 2006 Jul 18.
  • The annotation has been inferred from physical interaction with Ncl (Rattus norvegicus)
  • 5 additional annotations were made from Jin J, etal., Mol Cell Proteomics. 2007 May;6(5):845-59. Epub 2006 Jul 18.
  • 14776 RGD objects have been annotated to protein binding  (GO:0005515)
  • 35 papers in RGD have been used to annotate Park7


    • An association has been curated linking Park7 and protein binding in Rattus norvegicus.        

  • The association was inferred from physical interaction (IPI)
    		•  
  • The annotation was made from Moutaoufik MT, etal., iScience. 2019 Sep 27;19:1114-1132. doi: 10.1016/j.isci.2019.08.057. Epub 2019 Sep 4.
  • The annotation has been inferred from physical interaction with UniProtKB:Q6IUR5
  • 8 additional annotations were made from Moutaoufik MT, etal., iScience. 2019 Sep 27;19:1114-1132. doi: 10.1016/j.isci.2019.08.057. Epub 2019 Sep 4.
  • 14776 RGD objects have been annotated to protein binding  (GO:0005515)
  • 35 papers in RGD have been used to annotate Park7
  • Qualifier: enables
  • Curation Notes: PMID:31536960


    • An association has been curated linking Park7 and protein binding in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with PARK7 (Homo sapiens)
  • 14776 RGD objects have been annotated to protein binding  (GO:0005515)
  • 35 papers in RGD have been used to annotate Park7
  • Qualifier: enables
  • Curation Notes: UniProtKB:O00483|UniProtKB:O14656-2|UniProtKB:O54714|UniProtKB:O60260|UniProtKB:O75928|UniProtKB:O94776|UniProtKB:P01023|UniProtKB:P05067|UniProtKB:P06241-3|UniProtKB:P08254|UniProtKB:P10275|UniProtKB:P29590|UniProtKB:P32322|UniProtKB:P40337|UniProtKB:P42858|UniProtKB:P50570-2|UniProtKB:P63010-2|UniProtKB:P63165|UniProtKB:P63244|UniProtKB:Q13158|UniProtKB:Q15233|UniProtKB:Q3V3N7|UniProtKB:Q6DN90-2|UniProtKB:Q6GQQ9|UniProtKB:Q6ZNA4-2|UniProtKB:Q8CHZ9|UniProtKB:Q8IUW3|UniProtKB:Q8N5S9-2|UniProtKB:Q8NFH3|UniProtKB:Q8NFJ9|UniProtKB:Q96FW1|UniProtKB:Q99497|UniProtKB:Q9BXM7|UniProtKB:Q9BYQ4|UniProtKB:Q9BYZ2|UniProtKB:Q9GZS3|UniProtKB:Q9HD26|UniProtKB:Q9UBQ0-2|UniProtKB:Q9UER7|UniProtKB:Q9ULX5|UniProtKB:Q9UMX5 (PMID:11477070), (PMID:15790595), (PMID:15983381), (PMID:16632486), (PMID:17510388), (PMID:18000879), (PMID:19229105), (PMID:19822128), (PMID:20127688), (PMID:20969476), (PMID:21097510), (PMID:21785459), (PMID:22683601), (PMID:23743200), (PMID:24899725), (PMID:24947010), (PMID:25416956), (PMID:26752685), (PMID:31536960), (PMID:32814053)
  • Original References(s): PMID:11477070 PMID:15790595 PMID:15983381 PMID:16632486 PMID:17510388 PMID:18000879 PMID:19229105 PMID:19822128 PMID:20127688 PMID:20969476 PMID:21097510 PMID:21785459 PMID:22683601 PMID:23743200 PMID:24899725 PMID:24947010 PMID:25416956 PMID:26752685 PMID:31536960 PMID:32814053


    • An association has been curated linking Park7 and protein binding in Rattus norvegicus.        

  • The association was inferred from sequence or structural similarity (ISS)
    		•  
  • The annotation was made from RGD automated data pipeline
  • The annotation has been inferred from sequence or structural similarity with UniProtKB:Q99497
  • 14776 RGD objects have been annotated to protein binding  (GO:0005515)
  • 35 papers in RGD have been used to annotate Park7
  • Qualifier: enables
  • Curation Notes: GO_REF:0000024
  • Original References(s): GO_REF:0000024


    • An association has been curated linking Park7 and protein binding in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from RGD pipelines: Rat ISO annotations derived from the GO annotations of orthologous genes in other species.
  • The annotation has been inferred from sequence orthology with Park7 (Mus musculus)
  • 14776 RGD objects have been annotated to protein binding  (GO:0005515)
  • 35 papers in RGD have been used to annotate Park7
  • Qualifier: enables
  • Curation Notes: UniProtKB:P68040|UniProtKB:Q07813|UniProtKB:Q09014|UniProtKB:Q9CQ45 (PMID:14752510), (PMID:24947010), (PMID:26021615), (PMID:31536960)
  • Original References(s): PMID:14752510 PMID:24947010 PMID:26021615 PMID:31536960


    • Go Back to source page   Continue to Ontology report