Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

GENE - TERM ANNOTATION REPORT

3 Annotations Found.

An association has been curated linking Ptprb and glioblastoma in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Lorente G, etal., Neuro Oncol. 2005 Apr;7(2):154-63. doi: 10.1215/S1152851704000547.
  • The annotation has been inferred from sequence orthology with PTPRB (Homo sapiens) [(IEP) inferred from expression pattern]
  • 2 additional annotations were made from Lorente G, etal., Neuro Oncol. 2005 Apr;7(2):154-63. doi: 10.1215/S1152851704000547.
  • 170 RGD objects have been annotated to glioblastoma  (DOID:3068)
  • 28 papers in RGD have been used to annotate Ptprb
  • Curation Notes: protein:increased expression:brain (human)


    • An association has been curated linking Ptprb and glioblastoma in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Foehr ED, etal., Cancer Res. 2006 Feb 15;66(4):2271-8. doi: 10.1158/0008-5472.CAN-05-1221.
  • The annotation has been inferred from sequence orthology with PTPRB (Homo sapiens) [(IMP) inferred from mutant phenotype]
  • 2 additional annotations were made from Foehr ED, etal., Cancer Res. 2006 Feb 15;66(4):2271-8. doi: 10.1158/0008-5472.CAN-05-1221.
  • 170 RGD objects have been annotated to glioblastoma  (DOID:3068)
  • 28 papers in RGD have been used to annotate Ptprb
  • Qualifier: treatment
  • Curation Notes: human cells in mouse model


    • An association has been curated linking Ptprb and glioblastoma in Rattus norvegicus.        

  • The association was inferred from sequence orthology (ISO)
    		•  
  • The annotation was made from Ulbricht U, etal., J Neuropathol Exp Neurol. 2003 Dec;62(12):1265-75. doi: 10.1093/jnen/62.12.1265.
  • The annotation has been inferred from sequence orthology with PTPRB (Homo sapiens) [(IEP) inferred from expression pattern]
  • 6 additional annotations were made from Ulbricht U, etal., J Neuropathol Exp Neurol. 2003 Dec;62(12):1265-75. doi: 10.1093/jnen/62.12.1265.
  • 170 RGD objects have been annotated to glioblastoma  (DOID:3068)
  • 28 papers in RGD have been used to annotate Ptprb
  • Curation Notes: protein:increased expression:brain (human)


    • Go Back to source page   Continue to Ontology report