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MEASUREMENT METHODS - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:plasma total cholesterol measurement test
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Accession:MMO:0000284 term browser browse the term
Definition:A test which determines total amount of cholesterol carried in lipoprotein, such as high-density lipoprotein (HDL), low-density lipoprotein (LDL) and very-low-density lipoprotein (VLDL), molecules in a volume of plasma, the fluid portion of the blood in which the particulate components are suspended.


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plasma total cholesterol measurement test term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl14 Serum cholesterol level QTL 14 IDA RGD PMID:14739155 RGD:737694 NCBI chr 5:108,845,856...153,845,856 JBrowse link
Q Scl15 Serum cholesterol level QTL 15 IDA RGD PMID:14739155 RGD:737694 NCBI chr 5:33,215,665...78,215,665 JBrowse link
Q Scl16 Serum cholesterol level QTL 16 IDA RGD PMID:14739155 RGD:737694 NCBI chr 8:30,856,404...75,856,404 JBrowse link
Q Scl17 Serum cholesterol level QTL 17 IDA RGD PMID:14739155 RGD:737694 NCBI chr 2:211,744,537...249,053,267 JBrowse link
Q Scl18 Serum cholesterol level QTL 18 IDA RGD PMID:14739155 RGD:737694 NCBI chr 5:79,584,860...124,584,860 JBrowse link
Q Scl19 Serum cholesterol QTL 19 IDA RGD PMID:14709677 RGD:1299960 NCBI chr 1:90,532,338...123,479,925 JBrowse link
Q Scl20 Serum cholesterol level QTL 20 IDA RGD PMID:14709677 RGD:1299960 NCBI chr 5:82,394,392...166,664,054 JBrowse link
Q Scl21 Serum cholesterol level QTL 21 IDA RGD PMID:14709677 RGD:1299960 NCBI chr12:7,196,730...46,669,029 JBrowse link
Q Scl33 Serum cholesterol QTL 33 IDA RGD PMID:14709677 RGD:1299960
Q Scl34 Serum cholesterol QTL 34 IDA RGD PMID:14709677 RGD:1299960 NCBI chr 1:180,359,209...218,108,781 JBrowse link
Q Scl35 Serum cholesterol QTL 35 IDA RGD PMID:14709677 RGD:1299960 NCBI chr 5:28,515,489...73,515,489 JBrowse link
Q Scl36 Serum cholesterol QTL 36 IDA RGD PMID:14709677 RGD:1299960 NCBI chr 1:53,863,041...90,532,583 JBrowse link
Q Scl54 Serum cholesterol level QTL 54 IDA RGD PMID:17620956 RGD:2290428 NCBI chr 5:31,663,789...131,345,958 JBrowse link
Q Scl55 Serum cholesterol level QTL 55 IDA RGD PMID:17620956 RGD:2290428 NCBI chr 2:26,917,817...136,917,119 JBrowse link
Q Scl56 Serum cholesterol level QTL 56 IDA RGD PMID:17620956 RGD:2290428 NCBI chr 3:1...91,609,953 JBrowse link
Q Scl57 Serum cholesterol level QTL 57 IDA RGD PMID:17620956 RGD:2290428 NCBI chr 9:36,962,359...95,410,867 JBrowse link
Q Scl58 Serum cholesterol level QTL 58 IDA RGD PMID:17620956 RGD:2290428 NCBI chr11:12,831,046...25,121,472 JBrowse link
Q Scl66 Serum cholesterol level QTL 66 IDA RGD PMID:19584172 RGD:2316856 NCBI chr 8:30,848,259...105,647,037 JBrowse link

Related Phenotype Data for Term "plasma total cholesterol measurement test" (MMO:0000284)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:
Term paths to the root
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Term Annotations click to browse term
  measurement method 2368
    ex vivo method 1236
      ex vivo biological fluid analysis 305
        ex vivo blood analysis 250
          blood lipid analysis 57
            blood sterol analysis 36
              blood cholesterol analysis 36
                blood total cholesterol measurement test 31
                  plasma total cholesterol measurement test 18
                    automated plasma total cholesterol analysis + 0
paths to the root