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MEASUREMENT METHODS - ANNOTATIONS

The Clinical Measurement Ontology (CMO), Measurement Methods Ontology (MMO), and Experimental Condition Ontology (XCO) are currently being developed at the Rat Genome Database. For more information about these vocabularies please see Shimoyama et al. Three ontologies to define phenotype measurement data. Front Genet. 2012;3:87. Epub 2012 May 28 or contact us (http://rgd.mcw.edu/contact/index.shtml).
Term:blood lipid analysis
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Accession:MMO:0000038 term browser browse the term
Definition:A method to determine the level of one or more lipids, water insoluble fats and fat-like substances, in blood.


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blood high-density lipoprotein-cholesterol measurement test term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl32 Serum cholesterol level QTL 32 IDA RGD PMID:15452030 RGD:1302893 NCBI chr17:15,781,592...60,781,592 JBrowse link
blood phospholipid analysis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Spl4 Serum phospholipid level QTL 4 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 7:19,654,317...49,753,746 JBrowse link
Q Spl5 Serum phospholipid level QTL 5 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 7:19,654,317...52,888,450 JBrowse link
Q Spl7 Serum phospholipid level QTL 7 IDA RGD PMID:15452030 RGD:1302893 NCBI chr17:50,890,908...60,781,592 JBrowse link
Q Spl8 Serum phospholipid level QTL 8 IDA RGD PMID:15452030 RGD:1302893 NCBI chr17:1...60,781,592 JBrowse link
blood total cholesterol measurement test term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl30 Serum cholesterol level QTL 30 IDA RGD PMID:15452030 RGD:1302893 NCBI chr 7:19,654,317...49,753,746 JBrowse link
Q Scl31 Serum cholesterol level QTL 31 IDA RGD PMID:15452030 RGD:1302893 NCBI chr17:50,890,908...60,781,592 JBrowse link
blood triglyceride analysis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Stl13 Serum triglyceride level QTL 13 IDA RGD PMID:15452030 RGD:1302893 NCBI chr17:21,293,039...60,781,592 JBrowse link
blood very low-density lipoprotein-cholesterol measurement test term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl68 Serum cholesterol level QTL 68 IDA RGD PMID:15452030 RGD:1302893 NCBI chr17:15,781,592...60,781,592 JBrowse link
plasma total cholesterol measurement test term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl14 Serum cholesterol level QTL 14 IDA RGD PMID:14739155 RGD:737694 NCBI chr 5:108,845,856...153,845,856 JBrowse link
Q Scl15 Serum cholesterol level QTL 15 IDA RGD PMID:14739155 RGD:737694 NCBI chr 5:33,215,665...78,215,665 JBrowse link
Q Scl16 Serum cholesterol level QTL 16 IDA RGD PMID:14739155 RGD:737694 NCBI chr 8:30,856,404...75,856,404 JBrowse link
Q Scl17 Serum cholesterol level QTL 17 IDA RGD PMID:14739155 RGD:737694 NCBI chr 2:211,744,537...249,053,267 JBrowse link
Q Scl18 Serum cholesterol level QTL 18 IDA RGD PMID:14739155 RGD:737694 NCBI chr 5:79,584,860...124,584,860 JBrowse link
Q Scl19 Serum cholesterol QTL 19 IDA RGD PMID:14709677 RGD:1299960 NCBI chr 1:90,532,338...123,479,925 JBrowse link
Q Scl20 Serum cholesterol level QTL 20 IDA RGD PMID:14709677 RGD:1299960 NCBI chr 5:82,394,392...166,664,054 JBrowse link
Q Scl21 Serum cholesterol level QTL 21 IDA RGD PMID:14709677 RGD:1299960 NCBI chr12:7,196,730...46,669,029 JBrowse link
Q Scl33 Serum cholesterol QTL 33 IDA RGD PMID:14709677 RGD:1299960
Q Scl34 Serum cholesterol QTL 34 IDA RGD PMID:14709677 RGD:1299960 NCBI chr 1:180,359,209...218,108,781 JBrowse link
Q Scl35 Serum cholesterol QTL 35 IDA RGD PMID:14709677 RGD:1299960 NCBI chr 5:28,515,489...73,515,489 JBrowse link
Q Scl36 Serum cholesterol QTL 36 IDA RGD PMID:14709677 RGD:1299960 NCBI chr 1:53,863,041...90,532,583 JBrowse link
Q Scl54 Serum cholesterol level QTL 54 IDA RGD PMID:17620956 RGD:2290428 NCBI chr 5:31,663,789...131,345,958 JBrowse link
Q Scl55 Serum cholesterol level QTL 55 IDA RGD PMID:17620956 RGD:2290428 NCBI chr 2:26,917,817...136,917,119 JBrowse link
Q Scl56 Serum cholesterol level QTL 56 IDA RGD PMID:17620956 RGD:2290428 NCBI chr 3:1...91,609,953 JBrowse link
Q Scl57 Serum cholesterol level QTL 57 IDA RGD PMID:17620956 RGD:2290428 NCBI chr 9:36,962,359...95,410,867 JBrowse link
Q Scl58 Serum cholesterol level QTL 58 IDA RGD PMID:17620956 RGD:2290428 NCBI chr11:12,831,046...25,121,472 JBrowse link
Q Scl66 Serum cholesterol level QTL 66 IDA RGD PMID:19584172 RGD:2316856 NCBI chr 8:30,848,259...105,647,037 JBrowse link
plasma triglyceride analysis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Stl24 Serum triglyceride level QTL 24 IDA RGD PMID:19584172 RGD:2316856 NCBI chr 7:68,938,720...113,886,318 JBrowse link
Q Stl25 Serum triglyceride level QTL 25 IDA RGD PMID:14709677 RGD:1299960 NCBI chr 1:180,359,209...210,702,199 JBrowse link
Q Stl26 Serum triglyceride level QTL 26 IDA RGD PMID:14709677 RGD:1299960
Q Stl27 Serum triglyceride level QTL 27 IDA RGD PMID:14709677 RGD:1299960 NCBI chr 2:25,413,423...143,657,569 JBrowse link
Q Stl28 Serum triglyceride level QTL 28 IDA RGD PMID:14709677 RGD:1299960 NCBI chr 5:28,515,489...73,515,489 JBrowse link
Q Stl29 Serum triglyceride level QTL 29 IDA RGD PMID:14709677 RGD:1299960 NCBI chr13:84,730,788...86,800,898 JBrowse link
Q Stl30 Serum triglyceride level QTL 30 IDA RGD PMID:14709677 RGD:1299960 NCBI chr16:25,152,793...70,152,793 JBrowse link
Q Stl4 Serum triglyceride level QTL 4 IDA RGD PMID:12687333 RGD:631174 NCBI chr 4:73,169,846...132,642,728 JBrowse link
Q Stl5 Serum triglyceride level QTL 5 IDA RGD PMID:12687333 RGD:631174 NCBI chr 8:27,205,715...54,998,217 JBrowse link
Q Stl6 Serum triglyceride level QTL 6 IDA RGD PMID:12687333 RGD:631174 NCBI chr 8:10,378,157...112,202,585 JBrowse link
Q Stl7 Serum triglyceride level QTL 7 IDA RGD PMID:14532335 RGD:727992 NCBI chr11:29,528,418...82,566,702 JBrowse link
serum high-density lipoprotein-cholesterol measurement test term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl12 Serum cholesterol level QTL 12 IDA RGD PMID:8698878 RGD:61079 NCBI chr19:13,926,401...30,303,727 JBrowse link
Q Scl27 Serum cholesterol level QTL 27 IDA RGD PMID:11721057 RGD:70849 NCBI chr18:52,292,875...59,796,643 JBrowse link
Q Scl28 Serum cholesterol level QTL 28 IDA RGD PMID:11721057 RGD:70849 NCBI chr18:11,944,299...24,797,117 JBrowse link
serum phospholipid analysis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl13 Serum cholesterol level QTL 13 IDA RGD PMID:8698878 RGD:61079
Q Scl23 Serum cholesterol level QTL 23 IDA RGD PMID:8698878 RGD:61079 NCBI chr 4:1...27,716,890 JBrowse link
serum total cholesterol measurement test term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Scl1 Serum cholesterol level QTL 1 IDA RGD PMID:10634822 RGD:61092 NCBI chr15:16,725,528...80,672,115 JBrowse link
Q Scl2 Serum cholesterol level QTL 2 IDA RGD PMID:10634822 RGD:61092 NCBI chr 5:59,793,399...143,070,159 JBrowse link
Q Scl22 Serum cholesterol level QTL 22 IDA RGD PMID:9199194 RGD:61055 NCBI chr18:11,941,791...31,393,320 JBrowse link
Q Scl25 Serum cholesterol level QTL 25 IDA RGD PMID:11721057 RGD:70849 NCBI chr 1:94,494,440...117,601,394 JBrowse link
Q Scl26 Serum cholesterol level QTL 26 IDA RGD PMID:11721057 RGD:70849 NCBI chr 5:43,726,656...86,724,018 JBrowse link
Q Scl29 Serum cholesterol level QTL 29 IDA RGD PMID:14724732 RGD:737686 NCBI chr 6:35,098,709...71,636,405 JBrowse link
Q Scl3 Serum cholesterol level QTL 3 IDA RGD PMID:10634822 RGD:61092 NCBI chr 7:44,867,533...89,867,533 JBrowse link
Q Scl44 Serum cholesterol level QTL 44 IDA RGD PMID:16061941 RGD:1547851 NCBI chr 5:40,128,307...148,607,290 JBrowse link
Q Scl46 Serum cholesterol level QTL 46 IDA RGD PMID:16061941 RGD:1547851 NCBI chr 4:132,396,220...177,396,220 JBrowse link
Q Scl47 Serum cholesterol level QTL 47 IDA RGD PMID:16061941 RGD:1547851 NCBI chr10:50,574,707...95,574,707 JBrowse link
Q Scl48 Serum cholesterol level QTL 48 IDA RGD PMID:16061941 RGD:1547851 NCBI chr12:9,603,277...46,669,029 JBrowse link
serum triglyceride analysis term browser
Symbol Object Name Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
Q Stl19 Serum triglyceride level QTL 19 IDA RGD PMID:15752738 RGD:1357415 NCBI chr 4:5,218,294...65,958,103 JBrowse link
Q Stl8 Serum triglyceride level QTL 8 IDA RGD PMID:10644432 RGD:70852 NCBI chr 1:225,126,575...260,522,016 JBrowse link
Q Stl9 Serum triglyceride level QTL 9 IDA RGD PMID:10644432 RGD:70852 NCBI chr 8:41,867,010...70,386,132 JBrowse link
Term paths to the root
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Term Annotations click to browse term
  measurement method 2368
    ex vivo method 1236
      ex vivo biological fluid analysis 305
        ex vivo blood analysis 250
          blood lipid analysis 57
            automated plasma lipid analysis 0
            automated plasma triglyceride analysis 0
            automated serum lipid analysis + 0
            blood eicosanoid analysis + 0
            blood free fatty acid analysis + 0
            blood lipoprotein analysis + 5
            blood phospholipid analysis + 6
            blood sterol analysis + 36
            blood triglyceride analysis + 15
paths to the root