Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

ONTOLOGY REPORT - ANNOTATIONS


Term:pigment catabolic process
go back to main search page
Accession:GO:0046149 term browser browse the term
Definition:The chemical reactions and pathways resulting in the breakdown of a pigment, any general or particular coloring matter in living organisms, e.g. melanin.
Synonyms:exact_synonym: pigment breakdown;   pigment catabolism;   pigment degradation



show annotations for term's descendants           Sort by:
heme catabolic process term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Blvra biliverdin reductase A involved_in ISO
IEA
(PMID:10858451)
GO_REF:0000104
RGD
UniProt
PMID:10858451 GO_REF:0000104 NCBI chr 3:114,340,778...114,366,048
Ensembl chr 3:114,340,838...114,366,033
JBrowse link
G Blvrb biliverdin reductase B involved_in ISO (PMID:10858451), (PMID:7929092) RGD PMID:7929092 PMID:10858451 NCBI chr 1:82,738,646...82,756,312
Ensembl chr 1:82,738,695...82,770,375
JBrowse link
G Hmox1 heme oxygenase 1 involved_in
acts_upstream_of_or_within
IDA
ISO
IEA
IBA
(PMID:17915953)
GO_REF:0000107
MGI:1914989 (MGI:6383783|PMID:31571584)
GO_REF:0000033
RGD
Ensembl
GO_Central
PMID:17915953 PMID:31571584 PMID:15226268 GO_REF:0000033 GO_REF:0000107 MGI:6383783, RGD:1547877 NCBI chr19:13,466,287...13,474,082
Ensembl chr19:13,467,244...13,474,079
JBrowse link
G Hmox2 heme oxygenase 2 involved_in IEA
IBA
GO_REF:0000118
GO_REF:0000033
TreeGrafter
GO_Central
GO_REF:0000033 GO_REF:0000118 NCBI chr10:10,797,076...10,831,178
Ensembl chr10:10,797,055...10,831,148
JBrowse link
G Hmox2-ps1 heme oxygenase (decycling) 2, pseudogene 1 involved_in IBA GO_REF:0000033 GO_Central GO_REF:0000033 NCBI chr 2:200,299,951...200,302,161 JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20295
    metabolic process 11722
      pigment metabolic process 71
        pigment catabolic process 5
          anthocyanin-containing compound catabolic process + 0
          chlorophyll catabolic process + 0
          eye pigment catabolic process + 0
          heme catabolic process + 5
          melanin catabolic process 0
          ocellus pigment catabolic process + 0
paths to the root