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ONTOLOGY REPORT - ANNOTATIONS


Term:peptide cross-linking
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Accession:GO:0018149 term browser browse the term
Definition:The formation of a covalent cross-link between or within protein chains.



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peptide cross-linking term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Abca7 ATP binding cassette subfamily A member 7 involved_in ISS
ISO
GO_REF:0000024
(PMID:12917409)
Alzheimers_University_of_Toronto
RGD
PMID:12917409 GO_REF:0000024 NCBI chr 7:9,691,452...9,711,466
Ensembl chr 7:9,691,449...9,711,425
JBrowse link
G Anxa1 annexin A1 involved_in ISO (PMID:10908733) RGD PMID:10908733 NCBI chr 1:217,861,175...217,877,205
Ensembl chr 1:217,861,175...217,877,343
JBrowse link
G Col3a1 collagen type III alpha 1 chain involved_in ISO (PMID:16754721) RGD PMID:16754721 NCBI chr 9:47,374,611...47,410,547
Ensembl chr 9:47,374,593...47,410,547
JBrowse link
G Csta cystatin A involved_in ISO (PMID:10908733) RGD PMID:10908733 NCBI chr11:64,620,483...64,631,488
Ensembl chr11:64,620,483...64,631,488
JBrowse link
G Dsp desmoplakin involved_in ISO (PMID:10908733) RGD PMID:10908733 NCBI chr17:26,623,602...26,671,692
Ensembl chr17:26,623,588...26,671,800
JBrowse link
G Evpl envoplakin involved_in ISO (PMID:10908733) RGD PMID:10908733 NCBI chr10:101,458,227...101,474,778
Ensembl chr10:101,458,216...101,474,763
JBrowse link
G F13a1 coagulation factor XIII A1 chain involved_in
acts_upstream_of_or_within
ISS
ISO
GO_REF:0000024
(PMID:15507206)
(PMID:27363989)
UniProt
RGD
PMID:15507206 PMID:27363989 GO_REF:0000024 NCBI chr17:27,815,723...27,992,494
Ensembl chr17:27,815,702...27,992,700
JBrowse link
G Flg filaggrin involved_in ISO (PMID:7543090) RGD PMID:7543090 NCBI chr 2:178,884,793...178,912,986 JBrowse link
G Fn1 fibronectin 1 involved_in ISO (PMID:3997886) RGD PMID:3997886 NCBI chr 9:73,196,044...73,264,695
Ensembl chr 9:73,196,044...73,264,678
JBrowse link
G Ivl involucrin involved_in ISO (PMID:10908733) RGD PMID:10908733 NCBI chr 2:178,146,694...178,160,807
Ensembl chr 2:178,147,061...178,149,100
JBrowse link
G Krt1 keratin 1 involved_in ISO (PMID:7543090) RGD PMID:7543090 NCBI chr 7:132,976,618...132,981,844
Ensembl chr 7:132,976,620...132,981,844
JBrowse link
G Krt10 keratin 10 involved_in ISO (PMID:7543090) RGD PMID:7543090 NCBI chr10:84,338,695...84,343,279
Ensembl chr10:84,338,706...84,343,701
JBrowse link
G Krt2 keratin 2 involved_in ISO (PMID:7543090) RGD PMID:7543090 NCBI chr 7:132,940,879...132,948,031
Ensembl chr 7:132,940,862...132,947,963
JBrowse link
G Loricrin loricrin cornified envelope precursor protein involved_in ISO (PMID:10908733) RGD PMID:10908733 NCBI chr 2:177,558,062...177,560,960
Ensembl chr 2:177,558,252...177,559,807
JBrowse link
G Sprr1a small proline-rich protein 1A involved_in ISO (PMID:10908733), (PMID:7543090) RGD PMID:7543090 PMID:10908733 NCBI chr 2:178,055,096...178,057,012
Ensembl chr 2:178,055,096...178,057,063
JBrowse link
G Sprr1b small proline-rich protein 1B involved_in ISO (PMID:10908733) RGD PMID:10908733 NCBI chr 2:178,008,844...178,010,742
Ensembl chr 2:178,009,130...178,009,567
JBrowse link
G Sprr2a2 small proline-rich protein 2A2 involved_in ISO (PMID:7543090), (PMID:9722562) RGD PMID:7543090 PMID:9722562 NCBI chr 2:177,719,576...177,719,845
Ensembl chr 2:177,719,576...177,719,845
JBrowse link
G Tgm1 transglutaminase 1 involved_in NAS
ISO
(PMID:9722562) RGD PMID:9722562 PMID:1979171 RGD:61767 NCBI chr15:29,191,039...29,206,000
Ensembl chr15:29,191,041...29,204,523
JBrowse link
G Tgm2 transglutaminase 2 involved_in ISO (PMID:12506096), (PMID:23941696), (PMID:30458214), (PMID:9252372) RGD PMID:9252372 PMID:12506096 PMID:23941696 PMID:30458214 NCBI chr 3:146,772,684...146,801,924
Ensembl chr 3:146,772,687...146,801,981
JBrowse link
G Tgm3 transglutaminase 3 involved_in ISS
ISO
GO_REF:0000024
(PMID:12679341), (PMID:24643)
UniProt
RGD
PMID:24643 PMID:12679341 GO_REF:0000024 NCBI chr 3:117,228,661...117,264,078
Ensembl chr 3:117,228,661...117,264,075
JBrowse link
G Thbs1 thrombospondin 1 involved_in ISO (PMID:3997886) RGD PMID:3997886 NCBI chr 3:105,056,293...105,071,445
Ensembl chr 3:105,056,292...105,071,440
JBrowse link
isopeptide cross-linking via N6-(L-isoglutamyl)-L-lysine term browser
Symbol Object Name Qualifiers Evidence Notes Source PubMed Reference(s) RGD Reference(s) Position
G Tgm2 transglutaminase 2 involved_in IDA
ISO
(PMID:11013236) RGD PMID:11013236 PMID:16341586 RGD:1579955 NCBI chr 3:146,772,684...146,801,924
Ensembl chr 3:146,772,687...146,801,981
JBrowse link

Term paths to the root
Path 1
Term Annotations click to browse term
  biological_process 20052
    cellular process 19130
      metabolic process 11925
        macromolecule metabolic process 9783
          protein metabolic process 5279
            protein modification process 2694
              peptide cross-linking 21
                isopeptide cross-linking + 1
                peptide cross-linking via L-cystine 0
paths to the root